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Gene: RGD1307554 (similar to CG16812-PA) Rattus norvegicus
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Symbol: RGD1307554
Name: similar to CG16812-PA
Description: Predicted to localize to the nucleoplasm. Orthologous to human C19orf47 (chromosome 19 open reading frame 47); INTERACTS WITH acrylamide; bisphenol A; atrazine (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC292739; LOC292739; uncharacterized protein C19orf47 homolog
Orthologs:
Homo sapiens (human) : C19orf47 (chromosome 19 open reading frame 47)  HGNC  Alliance
Mus musculus (house mouse) : 2310022A10Rik (RIKEN cDNA 2310022A10 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102015359 (chromosome unknown open reading frame, human C19orf47)
Pan paniscus (bonobo/pygmy chimpanzee) : C19H19orf47 (chromosome 19 C19orf47 homolog)
Canis lupus familiaris (dog) : C1H19orf47 (chromosome 1 C19orf47 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH19orf47 (chromosome unknown C19orf47 homolog)
Sus scrofa (pig) : C6H19orf47 (chromosome 6 C19orf47 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0184,361,715 - 84,388,767 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0185,578,655 - 85,605,519 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,635,298 - 82,660,248 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1182,718,629 - 82,737,874 (+)NCBI
Celera177,257,162 - 77,281,153 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1307554
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307554
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.