Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pld3 (phospholipase D family, member 3) Rattus norvegicus
Analyze
Symbol: Pld3
Name: phospholipase D family, member 3
Description: Predicted to have single-stranded DNA 5'-3' exodeoxyribonuclease activity. Predicted to be involved in myotube differentiation and regulation of cytokine production involved in inflammatory response. Predicted to localize to bounding membrane of organelle; endoplasmic reticulum membrane; and lysosomal lumen. Human ortholog(s) of this gene implicated in spinocerebellar ataxia 46. Orthologous to human PLD3 (phospholipase D family member 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: choline phosphatase 3; LOC361527; MGC109410; phosphatidylcholine-hydrolyzing phospholipase D3; phospholipase D3; PLD 3
Orthologs:
Homo sapiens (human) : PLD3 (phospholipase D family member 3)  HGNC  Alliance
Mus musculus (house mouse) : Pld3 (phospholipase D family, member 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pld3 (phospholipase D family member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : PLD3 (phospholipase D family member 3)
Canis lupus familiaris (dog) : PLD3 (phospholipase D family member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pld3 (phospholipase D family member 3)
Sus scrofa (pig) : PLD3 (phospholipase D family member 3)
Chlorocebus sabaeus (African green monkey) : PLD3 (phospholipase D family member 3)
Heterocephalus glaber (naked mole-rat) : Pld3 (phospholipase D family member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0184,339,269 - 84,361,686 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,339,261 - 84,353,725 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0185,556,092 - 85,578,621 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4182,612,833 - 82,624,575 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1182,690,945 - 82,702,686 (-)NCBI
Celera177,234,697 - 77,246,439 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pld3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308248
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.