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ONTOLOGY REPORT - ANNOTATIONS

Term:plasma membrane bounded cell projection cytoplasm
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Accession:GO:0032838 term browser browse the term
Definition:All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.

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plasma membrane bounded cell projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntf ciliary neurotrophic factor ISO processes of nerve-ensheathing cells of the olfactory bulb RGD PMID:12849744 RGD:1358521 NCBI chrNW_004624864:1,785,215...1,788,608
Ensembl chrNW_004624864:1,782,139...1,792,879 		JBrowse link
G Ranbp1 RAN binding protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chrNW_004624747:728,123...736,045
Ensembl chrNW_004624747:728,014...736,043 		JBrowse link
axon cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr10 actin related protein 10 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624884:3,275,358...3,313,222
Ensembl chrNW_004624884:3,275,328...3,314,343 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624768:18,476,562...18,507,933
Ensembl chrNW_004624768:18,476,447...18,507,998 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624828:6,710,081...6,750,315
Ensembl chrNW_004624828:6,710,025...6,749,434 		JBrowse link
G Arl8a ARF like GTPase 8A located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624807:8,594,097...8,602,640
Ensembl chrNW_004624807:8,593,619...8,602,647 		JBrowse link
G Arl8b ARF like GTPase 8B located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624773:15,785,883...15,833,832
Ensembl chrNW_004624773:15,785,339...15,832,668 		JBrowse link
G Armcx3 armadillo repeat containing X-linked 3 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624902:957,669...962,015
Ensembl chrNW_004624902:957,669...962,039 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624802:12,299,866...12,304,295
Ensembl chrNW_004624802:12,290,688...12,304,712 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624755:23,031,649...23,033,282 JBrowse link
G Bsn bassoon presynaptic cytomatrix protein located_in ISO PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:10408625 RGD:11556226 (All species) (All species) NCBI chrNW_004624735:10,201,030...10,927,349
Ensembl chrNW_004624735:10,201,526...10,432,896 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624756:10,810,368...10,932,801
Ensembl chrNW_004624756:10,810,413...10,942,034 		JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in ISO PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chrNW_004624813:2,490,745...2,826,230
Ensembl chrNW_004624813:2,490,706...2,825,412 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 ISO RGD PMID:19641106 RGD:13207432 NCBI chrNW_004624747:13,169,865...13,172,592
Ensembl chrNW_004624747:13,169,865...13,172,525 		JBrowse link
G Hsbp1 heat shock factor binding protein 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624746:3,686,523...3,690,585
Ensembl chrNW_004624746:3,685,189...3,690,642 		JBrowse link
G Kif3a kinesin family member 3A ISO RGD PMID:15266650 RGD:11049593 NCBI chrNW_004624733:39,354,360...39,406,574
Ensembl chrNW_004624733:39,354,232...39,407,121 		JBrowse link
G Madd MAP kinase activating death domain located_in ISO (MGI:6189386|PMID:18849981) GOC PMID:18849981 MGI:6189386 NCBI chrNW_004624767:1,421,603...1,459,738
Ensembl chrNW_004624767:1,421,603...1,459,507 		JBrowse link
G Nefl neurofilament light chain located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624758:20,063,109...20,068,459
Ensembl chrNW_004624758:20,062,685...20,068,609 		JBrowse link
G Neto1 neuropilin and tolloid like 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624806:8,013,955...8,128,867
Ensembl chrNW_004624806:8,014,353...8,127,078 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436 		JBrowse link
G Ranbp1 RAN binding protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chrNW_004624747:728,123...736,045
Ensembl chrNW_004624747:728,014...736,043 		JBrowse link
G Rangap1 Ran GTPase activating protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chrNW_004624752:7,246,161...7,277,702
Ensembl chrNW_004624752:7,246,193...7,277,701 		JBrowse link
G Snapin SNAP associated protein located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624885:3,490,321...3,491,963
Ensembl chrNW_004624885:3,490,321...3,491,946 		JBrowse link
G Sybu syntabulin located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624763:8,657,276...8,742,161
Ensembl chrNW_004624763:8,657,285...8,766,586 		JBrowse link
G Tmem108 transmembrane protein 108 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624730:9,314,308...9,683,324
Ensembl chrNW_004624730:9,522,166...9,683,365 		JBrowse link
G Trak1 trafficking kinesin protein 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624730:77,330,449...77,470,156
Ensembl chrNW_004624730:77,331,992...77,399,741 		JBrowse link
G Trak2 trafficking kinesin protein 2 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624899:275,291...335,555
Ensembl chrNW_004624899:300,096...332,392 		JBrowse link
G Trim46 tripartite motif containing 46 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624885:2,344,250...2,354,390
Ensembl chrNW_004624885:2,343,991...2,354,288 		JBrowse link
G Zc3h14 zinc finger CCCH-type containing 14 located_in ISO (PMID:28793261) FlyBase PMID:28793261 NCBI chrNW_004624734:13,734,406...13,787,341
Ensembl chrNW_004624734:13,734,401...13,788,057 		JBrowse link
axonemal A tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap107 cilia and flagella associated protein 107 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624818:333,523...346,236
Ensembl chrNW_004624818:335,264...346,535 		JBrowse link
G Cfap161 cilia and flagella associated protein 161 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624768:20,730,979...20,742,495
Ensembl chrNW_004624768:20,730,887...20,742,110 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624778:13,841,227...13,891,946
Ensembl chrNW_004624778:13,839,310...13,891,714 		JBrowse link
G Cfap68 cilia and flagella associated protein 68 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624784:7,056,185...7,062,943
Ensembl chrNW_004624784:7,056,487...7,062,237 		JBrowse link
G Cfap95 cilia and flagella associated protein 95 is_active_in
located_in		 ISO
IEA		 (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI
Ensembl		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chrNW_004624736:3,123,396...3,293,724
Ensembl chrNW_004624736:3,158,245...3,256,665 		JBrowse link
G Cimip2a ciliary microtubule inner protein 2A is_active_in ISO (PMID:37295417), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37989994 NCBI chrNW_004624760:710,923...715,126
Ensembl chrNW_004624760:711,349...715,024 		JBrowse link
G Cimip2b ciliary microtubule inner protein 2B is_active_in ISO (PMID:37865089) UniProt PMID:37865089 NCBI chrNW_004624915:701,983...708,079 JBrowse link
G Cimip2c ciliary microtubule inner protein 2C is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624738:8,702,652...8,716,962 JBrowse link
G Efcab6 EF-hand calcium binding domain 6 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624752:5,313,804...5,552,248 JBrowse link
G Efhb EF-hand domain family member B is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624821:5,215,680...5,269,500
Ensembl chrNW_004624821:5,216,624...5,269,433 		JBrowse link
G Efhc1 EF-hand domain containing 1 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624855:3,611,016...3,677,813
Ensembl chrNW_004624855:3,611,176...3,677,675 		JBrowse link
G Mns1 meiosis specific nuclear structural 1 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624781:15,292,047...15,337,466
Ensembl chrNW_004624781:15,291,416...15,328,173 		JBrowse link
G Nme7 NME/NM23 family member 7 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
G Pierce1 piercer of microtubule wall 1 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chrNW_004624760:3,095,656...3,112,545
Ensembl chrNW_004624760:3,109,127...3,112,526 		JBrowse link
G Pierce2 piercer of microtubule wall 2 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624853:138,153...139,077 JBrowse link
G Ribc1 RIB43A domain with coiled-coils 1 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624909:668,547...681,592
Ensembl chrNW_004624909:669,135...684,237 		JBrowse link
G Ribc2 RIB43A domain with coiled-coils 2 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624752:4,241,679...4,255,776
Ensembl chrNW_004624752:4,238,457...4,255,537 		JBrowse link
G Spag8 sperm associated antigen 8 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624868:4,971,510...4,974,601
Ensembl chrNW_004624868:4,972,286...4,974,442 		JBrowse link
G Spmip5 sperm microtubule inner protein 5 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624737:29,919,266...29,933,142
Ensembl chrNW_004624737:29,920,316...29,925,686 		JBrowse link
G Spmip6 sperm microtubule inner protein 6 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624736:38,784,071...38,800,097
Ensembl chrNW_004624736:38,784,128...38,799,912 		JBrowse link
G Spmip8 sperm microtubule inner protein 8 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624746:28,174,665...28,193,241
Ensembl chrNW_004624746:28,176,607...28,192,360 		JBrowse link
G Spmip9 sperm microtubule inner protein 9 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624749:15,968,820...15,973,067
Ensembl chrNW_004624749:15,968,820...15,973,067 		JBrowse link
G Tekt1 tektin 1 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624786:7,218,533...7,248,593
Ensembl chrNW_004624786:7,218,590...7,249,538 		JBrowse link
G Tekt2 tektin 2 located_in
is_active_in		 IEA
ISO		 (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 Ensembl
MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chrNW_004624764:19,078,094...19,081,596
Ensembl chrNW_004624764:19,077,234...19,081,379 		JBrowse link
G Tekt3 tektin 3 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624877:3,367,466...3,407,917
Ensembl chrNW_004624877:3,367,201...3,408,582 		JBrowse link
G Tekt5 tektin 5 is_active_in ISO (PMID:37295417)
PMID:17924527		 MGI
UniProt		 PMID:17924527 PMID:37295417 RGD:405866203 NCBI chrNW_004624824:7,961,590...8,024,640
Ensembl chrNW_004624824:7,966,510...8,010,592 		JBrowse link
axonemal B tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap126 cilia and flagella associated protein 126 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624794:21,878...53,363 JBrowse link
G Cfap144 cilia and flagella associated protein 144 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624743:1,224,914...1,229,474
Ensembl chrNW_004624743:1,224,945...1,229,180 		JBrowse link
G Cfap20 cilia and flagella associated protein 20 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624746:28,071,502...28,085,040
Ensembl chrNW_004624746:28,071,519...28,085,231 		JBrowse link
G Cfap210 cilia and flagella associated protein 210 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624787:7,183,073...7,214,625
Ensembl chrNW_004624787:7,183,408...7,205,619 		JBrowse link
G Cfap276 cilia and flagella associated protein 276 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624772:4,866,226...4,872,781
Ensembl chrNW_004624772:4,867,483...4,872,478 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624794:1,344,107...1,380,069
Ensembl chrNW_004624794:1,352,445...1,379,961 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 is_active_in ISO (PMID:37295417), (PMID:37865089), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624786:11,992,545...12,050,112
Ensembl chrNW_004624786:11,992,553...12,050,220 		JBrowse link
G Cfap77 cilia and flagella associated protein 77 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624760:3,780,678...3,890,265
Ensembl chrNW_004624760:3,779,492...3,890,851 		JBrowse link
G Cfap90 cilia and flagella associated protein 90 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624751:5,409,850...5,428,096
Ensembl chrNW_004624751:5,413,401...5,428,093 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624796:3,961,148...3,980,197
Ensembl chrNW_004624796:3,961,538...3,980,952 		JBrowse link
G Pacrg parkin coregulated is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chrNW_004624855:99,475...430,105 JBrowse link
G Spmip10 sperm microtubule inner protein 10 is_active_in ISO (PMID:37295417), (PMID:37989994) UniProt
MGI		 PMID:37295417 PMID:37989994 NCBI chrNW_004624774:14,999,884...15,004,496 JBrowse link
G Tektl1 tektin like 1 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chrNW_004624901:2,069,167...2,078,414
Ensembl chrNW_004624901:2,069,084...2,078,840 		JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift88 intraflagellar transport 88 located_in ISO (PMID:24302887) MGI PMID:24302887 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:9,901,021...10,303,217
Ensembl chrNW_004624762:9,970,904...10,303,046 		JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin HYDIN axonemal central pair apparatus protein located_in ISO (MGI:6331463|PMID:30535028)
(PMID:30535028)		 UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
G Spag16 sperm associated antigen 16 located_in ISO (PMID:12391165) MGI PMID:12391165 NCBI chrNW_004624765:2,548,748...2,886,134 JBrowse link
G Spag17 sperm associated antigen 17 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:13,626,247...13,836,442
Ensembl chrNW_004624772:13,636,625...13,836,466 		JBrowse link
G Spef1 sperm flagellar 1 located_in ISO (PMID:30535028)
(MGI:6331463|PMID:30535028)		 UniProt PMID:30535028 MGI:6331463 NCBI chrNW_004624741:4,861,992...4,868,261
Ensembl chrNW_004624741:4,862,872...4,866,783 		JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hydin HYDIN axonemal central pair apparatus protein located_in ISO (PMID:18250199) MGI PMID:18250199 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc65 coiled-coil domain containing 65 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624816:3,266,483...3,282,580
Ensembl chrNW_004624816:3,266,395...3,280,855 		JBrowse link
G Dnah2 dynein axonemal heavy chain 2 part_of ISO (PMID:30060180)
(MGI:6436377|PMID:30060180)		 UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004624786:10,311,183...10,413,236
Ensembl chrNW_004624786:10,311,214...10,413,037 		JBrowse link
G Dnah5 dynein axonemal heavy chain 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:10,799,102...11,110,180
Ensembl chrNW_004624751:10,799,892...11,050,403 		JBrowse link
G Dnah9 dynein axonemal heavy chain 9 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:14,031,785...14,411,469
Ensembl chrNW_004624786:14,031,718...14,411,533 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 part_of ISO (PMID:11153919) MGI PMID:11153919 NCBI chrNW_004624801:4,252,779...4,284,432
Ensembl chrNW_004624801:4,252,814...4,280,227 		JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:12,369,903...12,463,184
Ensembl chrNW_004624742:12,369,834...12,463,215 		JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:28,100,838...28,181,385 JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 part_of ISO (MGI:6436377|PMID:30060180)
(PMID:30060180)		 UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004624752:13,855,328...13,932,210
Ensembl chrNW_004624752:13,855,426...13,936,764 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624738:8,540,863...8,599,386
Ensembl chrNW_004624738:8,541,063...8,599,491 		JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ARF guanine nucleotide exchange factor 2 located_in ISO PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chrNW_004624790:6,290,021...6,381,492
Ensembl chrNW_004624790:6,290,881...6,381,461 		JBrowse link
G Cep162 centrosomal protein 162 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624799:10,359,786...10,441,067
Ensembl chrNW_004624799:10,359,323...10,441,151 		JBrowse link
G Cfap107 cilia and flagella associated protein 107 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624818:333,523...346,236
Ensembl chrNW_004624818:335,264...346,535 		JBrowse link
G Cfap126 cilia and flagella associated protein 126 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:21,878...53,363 JBrowse link
G Cfap144 cilia and flagella associated protein 144 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624743:1,224,914...1,229,474
Ensembl chrNW_004624743:1,224,945...1,229,180 		JBrowse link
G Cfap161 cilia and flagella associated protein 161 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624768:20,730,979...20,742,495
Ensembl chrNW_004624768:20,730,887...20,742,110 		JBrowse link
G Cfap20 cilia and flagella associated protein 20 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624746:28,071,502...28,085,040
Ensembl chrNW_004624746:28,071,519...28,085,231 		JBrowse link
G Cfap210 cilia and flagella associated protein 210 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624787:7,183,073...7,214,625
Ensembl chrNW_004624787:7,183,408...7,205,619 		JBrowse link
G Cfap276 cilia and flagella associated protein 276 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624772:4,866,226...4,872,781
Ensembl chrNW_004624772:4,867,483...4,872,478 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624794:1,344,107...1,380,069
Ensembl chrNW_004624794:1,352,445...1,379,961 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624786:11,992,545...12,050,112
Ensembl chrNW_004624786:11,992,553...12,050,220 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624778:13,841,227...13,891,946
Ensembl chrNW_004624778:13,839,310...13,891,714 		JBrowse link
G Cfap77 cilia and flagella associated protein 77 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624760:3,780,678...3,890,265
Ensembl chrNW_004624760:3,779,492...3,890,851 		JBrowse link
G Cfap95 cilia and flagella associated protein 95 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:3,123,396...3,293,724
Ensembl chrNW_004624736:3,158,245...3,256,665 		JBrowse link
G Cimip2b ciliary microtubule inner protein 2B located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624915:701,983...708,079 JBrowse link
G Cimip2c ciliary microtubule inner protein 2C located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624738:8,702,652...8,716,962 JBrowse link
G Efhb EF-hand domain family member B located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624821:5,215,680...5,269,500
Ensembl chrNW_004624821:5,216,624...5,269,433 		JBrowse link
G Efhc1 EF-hand domain containing 1 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624855:3,611,016...3,677,813
Ensembl chrNW_004624855:3,611,176...3,677,675 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624796:3,961,148...3,980,197
Ensembl chrNW_004624796:3,961,538...3,980,952 		JBrowse link
G LOC101699979 tetratricopeptide repeat protein 30B located_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624787:14,731,054...14,733,825 JBrowse link
G LOC101701600 EF-hand domain-containing family member C2 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624821:8,394,409...8,396,845 JBrowse link
G LOC101715424 tubulin alpha-1B chain-like located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G LOC101717366 tetratricopeptide repeat protein 30B-like located_in IEA TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624787:14,668,483...14,671,654 JBrowse link
G LOC101722211 EF-hand domain-containing family member C2 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624887:213,544...463,328 JBrowse link
G Mns1 meiosis specific nuclear structural 1 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624781:15,292,047...15,337,466
Ensembl chrNW_004624781:15,291,416...15,328,173 		JBrowse link
G Nme7 NME/NM23 family member 7 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
G Pacrg parkin coregulated located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624855:99,475...430,105 JBrowse link
G Pierce1 piercer of microtubule wall 1 located_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004624760:3,095,656...3,112,545
Ensembl chrNW_004624760:3,109,127...3,112,526 		JBrowse link
G Pierce2 piercer of microtubule wall 2 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624853:138,153...139,077 JBrowse link
G Ribc2 RIB43A domain with coiled-coils 2 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624752:4,241,679...4,255,776
Ensembl chrNW_004624752:4,238,457...4,255,537 		JBrowse link
G Rpgrip1l RPGRIP1 like ISO RGD PMID:17558407 RGD:11537356 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115 		JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:22,926,420...23,035,788
Ensembl chrNW_004624736:22,926,686...22,958,800 		JBrowse link
G Saxo2 stabilizer of axonemal microtubules 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:19,701,693...19,724,627
Ensembl chrNW_004624768:19,701,614...19,724,589 		JBrowse link
G Spaca9 sperm acrosome associated 9 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624760:3,537,547...3,546,027
Ensembl chrNW_004624760:3,537,550...3,545,456 		JBrowse link
G Spag8 sperm associated antigen 8 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624868:4,971,510...4,974,601
Ensembl chrNW_004624868:4,972,286...4,974,442 		JBrowse link
G Tekt1 tektin 1 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624786:7,218,533...7,248,593
Ensembl chrNW_004624786:7,218,590...7,249,538 		JBrowse link
G Tekt2 tektin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:19,078,094...19,081,596
Ensembl chrNW_004624764:19,077,234...19,081,379 		JBrowse link
G Tekt3 tektin 3 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624877:3,367,466...3,407,917
Ensembl chrNW_004624877:3,367,201...3,408,582 		JBrowse link
G Tubb4b tubulin beta 4B class IVb located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:715,013...717,462
Ensembl chrNW_004624760:712,987...717,951 		JBrowse link
axonemal microtubule doublet inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp3 dual specificity phosphatase 3 is_active_in ISO (PMID:37865089) UniProt PMID:37865089 NCBI chrNW_004624795:994,103...1,001,697 JBrowse link
G Spaca9 sperm acrosome associated 9 is_active_in ISO (PMID:37865089), (PMID:37989994) UniProt PMID:37865089 PMID:37989994 NCBI chrNW_004624760:3,537,547...3,546,027
Ensembl chrNW_004624760:3,537,550...3,545,456 		JBrowse link
G Tssk6 testis specific serine kinase 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624908:2,310,456...2,311,803
Ensembl chrNW_004624908:2,310,872...2,311,693 		JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak8 adenylate kinase 8 located_in ISO (PMID:33139725)
(PMID:24740601)		 GO_Central
MGI		 PMID:24740601 PMID:33139725 NCBI chrNW_004624760:3,545,491...3,666,266
Ensembl chrNW_004624760:3,545,403...3,660,658 		JBrowse link
G Akap14 A-kinase anchoring protein 14 located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chrNW_004624895:3,829,155...3,834,955 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624767:1,967,002...2,160,102
Ensembl chrNW_004624767:1,966,898...2,160,465 		JBrowse link
G Arl13b ARF like GTPase 13B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624789:6,710,858...6,783,097
Ensembl chrNW_004624789:6,710,681...6,783,667 		JBrowse link
G Arl3 ARF like GTPase 3 located_in ISO (PMID:26455799)
(MGI:5925653|PMID:26455799)		 UniProt PMID:26455799 MGI:5925653 NCBI chrNW_004624831:2,041,241...2,077,801
Ensembl chrNW_004624831:2,037,023...2,078,220 		JBrowse link
G Arl6 ARF like GTPase 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:10,223,339...10,252,889
Ensembl chrNW_004624789:10,229,793...10,254,364 		JBrowse link
G Atg14 autophagy related 14 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624884:165,443...220,525 JBrowse link
G Atg16l1 autophagy related 16 like 1 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624843:5,797,725...5,838,768
Ensembl chrNW_004624843:5,805,069...5,838,741 		JBrowse link
G Atg5 autophagy related 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Atg7 autophagy related 7 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Bbof1 basal body orientation factor 1 located_in ISO (PMID:37198331)
(MGI:7565919|PMID:37198331)		 UniProt PMID:37198331 MGI:7565919 NCBI chrNW_004624734:27,517,617...27,568,703 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in ISO (PMID:24833722) MGI PMID:24833722 NCBI chrNW_004624787:7,045,509...7,062,575
Ensembl chrNW_004624787:7,045,492...7,062,347 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624777:2,105,122...2,151,399
Ensembl chrNW_004624777:2,104,765...2,151,402 		JBrowse link
G Brwd1 bromodomain and WD repeat domain containing 1 located_in ISO (PMID:33389130) UniProt PMID:33389130 NCBI chrNW_004624745:24,700,822...24,850,041 JBrowse link
G Camsap3 calmodulin regulated spectrin associated protein family member 3 located_in ISO (PMID:32482850)
(MGI:6436727|PMID:32482850)		 UniProt PMID:32482850 MGI:6436727 NCBI chrNW_004624828:689,010...703,496
Ensembl chrNW_004624828:688,564...704,174 		JBrowse link
G Ccdc146 coiled-coil domain containing 146 located_in ISO (PMID:38441556) UniProt PMID:38441556 NCBI chrNW_004624739:26,445,872...26,580,775
Ensembl chrNW_004624739:26,474,281...26,581,666 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit located_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit located_in ISO (PMID:23255504) SYSCILIA_CCNET PMID:23255504 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Ccdc63 coiled-coil domain containing 63 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:21,114,125...21,149,269
Ensembl chrNW_004624747:21,115,159...21,145,188 		JBrowse link
G Ccdc65 coiled-coil domain containing 65 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:3,266,483...3,282,580
Ensembl chrNW_004624816:3,266,395...3,280,855 		JBrowse link
G Ccsap centriole, cilia and spindle associated protein located_in ISO (PMID:22493317) UniProt PMID:22493317 NCBI chrNW_004624775:19,693,987...19,715,937
Ensembl chrNW_004624775:19,694,087...19,713,650 		JBrowse link
G Cenpf centromere protein F located_in ISO (PMID:25564561) MGI PMID:25564561 NCBI chrNW_004624771:19,657,489...19,702,506
Ensembl chrNW_004624771:19,656,981...19,702,625 		JBrowse link
G Cfap107 cilia and flagella associated protein 107 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624818:333,523...346,236
Ensembl chrNW_004624818:335,264...346,535 		JBrowse link
G Cfap119 cilia and flagella associated protein 119 is_active_in
NOT|located_in		 ISO (PMID:37601242)
PMID:27032685		 MGI
UniProt		 PMID:27032685 PMID:37601242 RGD:11529800 NCBI chrNW_004624782:13,880,631...13,884,704
Ensembl chrNW_004624782:13,880,680...13,884,366 		JBrowse link
G Cfap184 cilia and flagella associated protein 184 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:23,257,680...23,262,292 JBrowse link
G Cfap206 cilia and flagella associated protein 206 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624799:6,833,797...6,923,650
Ensembl chrNW_004624799:6,833,791...6,923,918 		JBrowse link
G Cfap263 cilia and flagella associated protein 263 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:27,955,078...27,979,980
Ensembl chrNW_004624746:27,955,143...27,980,764 		JBrowse link
G Cfap36 cilia and flagella associated protein 36 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:6,009,569...6,034,550
Ensembl chrNW_004624833:6,010,926...6,034,560 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:3,231,854...3,336,184 JBrowse link
G Cfap45 cilia and flagella associated protein 45 located_in ISO (PMID:33139725) GO_Central PMID:33139725 NCBI chrNW_004624794:1,344,107...1,380,069
Ensembl chrNW_004624794:1,352,445...1,379,961 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624786:11,992,545...12,050,112
Ensembl chrNW_004624786:11,992,553...12,050,220 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 located_in ISO (PMID:25504577)
(PMID:33347437)		 UniProt
MGI		 PMID:25504577 PMID:33347437 NCBI chrNW_004624778:13,841,227...13,891,946
Ensembl chrNW_004624778:13,839,310...13,891,714 		JBrowse link
G Cfap61 cilia and flagella associated protein 61 located_in ISO (PMID:35387802) MGI PMID:35387802 NCBI chrNW_004624741:20,581,691...20,856,165 JBrowse link
G Cfap68 cilia and flagella associated protein 68 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624784:7,056,185...7,062,943
Ensembl chrNW_004624784:7,056,487...7,062,237 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 located_in ISO (MGI:6383288|PMID:30158508)
(PMID:30158508)		 UniProt PMID:30158508 MGI:6383288 NCBI chrNW_004624754:6,923,431...6,977,007
Ensembl chrNW_004624754:6,923,632...6,973,670 		JBrowse link
G Cfap90 cilia and flagella associated protein 90 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chrNW_004624751:5,409,850...5,428,096
Ensembl chrNW_004624751:5,413,401...5,428,093 		JBrowse link
G Ctsh cathepsin H ISO RGD PMID:12838426 RGD:5686399 NCBI chrNW_004624941:82,209...98,156
Ensembl chrNW_004624941:82,209...98,182 		JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:2,644,287...2,813,908
Ensembl chrNW_004624756:2,644,248...2,809,787 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 located_in ISO (PMID:18385425) UniProt PMID:18385425 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Dnah1 dynein axonemal heavy chain 1 located_in ISO (PMID:24360805) UniProt PMID:24360805 NCBI chrNW_004624822:4,818,972...4,882,076
Ensembl chrNW_004624822:4,819,019...4,878,438 		JBrowse link
G Dnah10 dynein axonemal heavy chain 10 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624747:23,504,187...23,602,565
Ensembl chrNW_004624747:23,504,219...23,602,434 		JBrowse link
G Dnah11 dynein axonemal heavy chain 11 located_in ISO (PMID:33139725)
(PMID:26909801), (PMID:33347437)
(PMID:31178125)		 GO_Central
MGI
UniProt		 PMID:26909801 PMID:31178125 PMID:33139725 PMID:33347437 NCBI chrNW_004624739:8,810,127...9,136,044
Ensembl chrNW_004624739:8,811,082...9,135,815 		JBrowse link
G Dnah17 dynein axonemal heavy chain 17 located_in ISO (PMID:31178125) UniProt PMID:31178125 NCBI chrNW_004624801:7,901,329...8,015,433
Ensembl chrNW_004624801:7,901,503...8,013,303 		JBrowse link
G Dnah2 dynein axonemal heavy chain 2 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624786:10,311,183...10,413,236
Ensembl chrNW_004624786:10,311,214...10,413,037 		JBrowse link
G Dnah3 dynein axonemal heavy chain 3 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624782:7,072,258...7,244,308
Ensembl chrNW_004624782:7,074,710...7,239,551 		JBrowse link
G Dnah5 dynein axonemal heavy chain 5 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624751:10,799,102...11,110,180
Ensembl chrNW_004624751:10,799,892...11,050,403 		JBrowse link
G Dnah7 dynein axonemal heavy chain 7 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624854:912,986...1,180,639
Ensembl chrNW_004624854:912,992...1,162,920 		JBrowse link
G Dnah8 dynein axonemal heavy chain 8 located_in ISO (PMID:31178125)
(PMID:32619401)		 UniProt PMID:31178125 PMID:32619401 NCBI chrNW_004624754:19,260,042...19,528,071
Ensembl chrNW_004624754:19,260,168...19,522,032 		JBrowse link
G Dnah9 dynein axonemal heavy chain 9 located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624786:14,031,785...14,411,469
Ensembl chrNW_004624786:14,031,718...14,411,533 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 located_in ISO (PMID:18950741), (PMID:23849778)
(PMID:29916806)
(PMID:11153919)		 SYSCILIA_CCNET
MGI		 PMID:11153919 PMID:18950741 PMID:23849778 PMID:29916806 NCBI chrNW_004624801:4,252,779...4,284,432
Ensembl chrNW_004624801:4,252,814...4,280,227 		JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 located_in ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chrNW_004624742:28,100,838...28,181,385 JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:13,855,328...13,932,210
Ensembl chrNW_004624752:13,855,426...13,936,764 		JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 located_in ISO (PMID:18247331) MGI PMID:18247331 NCBI chrNW_004624817:3,078,578...3,093,273
Ensembl chrNW_004624817:3,077,086...3,093,117 		JBrowse link
G Dnali1 dynein axonemal light intermediate chain 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:20,294,637...20,303,384
Ensembl chrNW_004624764:20,294,072...20,303,380 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:8,540,863...8,599,386
Ensembl chrNW_004624738:8,541,063...8,599,491 		JBrowse link
G Drc3 dynein regulatory complex subunit 3 located_in ISO (PMID:26387594) MGI PMID:26387594 NCBI chrNW_004624849:3,429,932...3,466,172
Ensembl chrNW_004624849:3,429,932...3,466,481 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 located_in ISO (MGI:5009180|PMID:12802074)
(PMID:12802074)		 BHF-UCL PMID:12802074 MGI:5009180 NCBI chrNW_004624918:1,730,675...2,071,231
Ensembl chrNW_004624918:1,730,708...2,071,072 		JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 located_in ISO (PMID:24183451)
(MGI:5551675|PMID:24183451)		 UniProt PMID:24183451 MGI:5551675 NCBI chrNW_004624760:6,321,195...6,331,784
Ensembl chrNW_004624760:6,321,172...6,331,532 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:25,245,792...25,298,397
Ensembl chrNW_004624738:25,245,890...25,283,706 		JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B located_in ISO (PMID:25830415) GO_Central PMID:25830415 NCBI chrNW_004624730:61,467,262...61,479,848
Ensembl chrNW_004624730:61,467,510...61,479,756 		JBrowse link
G Dynlt4 dynein light chain Tctex-type 4 located_in ISO (PMID:23789093) MGI
UniProt		 PMID:23789093 NCBI chrNW_004624906:693,615...695,727
Ensembl chrNW_004624906:688,800...695,888 		JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1 like located_in ISO (PMID:29487109) MGI PMID:29487109 NCBI chrNW_004624730:14,568,625...14,619,673
Ensembl chrNW_004624730:14,568,382...14,619,272 		JBrowse link
G Efhc1 EF-hand domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624855:3,611,016...3,677,813
Ensembl chrNW_004624855:3,611,176...3,677,675 		JBrowse link
G Gabarap GABA type A receptor-associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,857,370...9,859,675
Ensembl chrNW_004624786:9,857,370...9,860,063 		JBrowse link
G Gas8 growth arrest specific 8 located_in ISO (PMID:16643277), (PMID:26387594) UniProt PMID:16643277 PMID:26387594 NCBI chrNW_004624746:29,776...44,825
Ensembl chrNW_004624746:29,776...44,741 		JBrowse link
G Gli1 GLI family zinc finger 1 located_in ISO (PMID:16254602)
(MGI:3692156|PMID:16254602)		 CACAO PMID:16254602 MGI:3692156 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609 		JBrowse link
G Gli2 GLI family zinc finger 2 located_in ISO (PMID:21209331)
(MGI:4888042|PMID:21209331)		 CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Gli3 GLI family zinc finger 3 located_in ISO (PMID:21209331)
(MGI:4888042|PMID:21209331)		 CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 ISO RGD PMID:17021831 RGD:2302145 NCBI chrNW_004624739:29,252,919...29,299,315
Ensembl chrNW_004624739:29,254,996...29,299,315 		JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
G Ift140 intraflagellar transport 140 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624913:616,283...712,040
Ensembl chrNW_004624913:621,203...711,493 		JBrowse link
G Ift57 intraflagellar transport 57 located_in ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chrNW_004624731:41,321,574...41,390,133
Ensembl chrNW_004624731:41,322,033...41,388,570 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:11251073), (PMID:11854326), (PMID:18066062), (PMID:20368623), (PMID:24302887) MGI PMID:11251073 PMID:11854326 PMID:18066062 PMID:20368623 PMID:24302887 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:1,586,003...1,594,869
Ensembl chrNW_004624760:1,586,848...1,594,835 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO (PMID:19384852) MGI PMID:19384852 NCBI chrNW_004624764:5,682,800...5,724,852
Ensembl chrNW_004624764:5,682,829...5,724,656 		JBrowse link
G Kif3a kinesin family member 3A ISO RGD PMID:9920666 RGD:1581597 NCBI chrNW_004624733:39,354,360...39,406,574
Ensembl chrNW_004624733:39,354,232...39,407,121 		JBrowse link
G Kifap3 kinesin associated protein 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:10,381,217...10,521,349
Ensembl chrNW_004624805:10,416,095...10,504,234 		JBrowse link
G Lca5 lebercilin LCA5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:6,143,586...6,199,436
Ensembl chrNW_004624819:6,141,740...6,199,624 		JBrowse link
G LOC101697044 sperm flagellar protein 1-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:13,474,877...13,480,294 JBrowse link
G LOC101698131 actin-related protein 2/3 complex subunit 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:4,420,513...4,457,843
Ensembl chrNW_004624731:4,420,515...4,432,023 		JBrowse link
G LOC101701600 EF-hand domain-containing family member C2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624821:8,394,409...8,396,845 JBrowse link
G LOC101722211 EF-hand domain-containing family member C2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624887:213,544...463,328 JBrowse link
G Mak male germ cell associated kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:15,119,788...15,167,815
Ensembl chrNW_004624756:15,119,788...15,168,680 		JBrowse link
G Map1lc3b microtubule associated protein 1 light chain 3 beta located_in ISO (PMID:24089209)
(MGI:5527012|PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624746:3,084,418...3,094,250
Ensembl chrNW_004624746:3,084,392...3,094,250 		JBrowse link
G Map4 microtubule associated protein 4 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004624730:73,490,974...73,656,097 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 NOT|located_in ISO (PMID:29021280) UniProt PMID:29021280 NCBI chrNW_004624735:13,049,509...13,077,509
Ensembl chrNW_004624735:13,047,125...13,056,308 		JBrowse link
G Mapt microtubule associated protein tau located_in ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Mns1 meiosis specific nuclear structural 1 located_in ISO (PMID:30148830)
(MGI:7565919|PMID:37198331), (PMID:22396656)
(PMID:22396656), (PMID:37198331)		 UniProt
MGI		 PMID:22396656 PMID:30148830 PMID:37198331 MGI:7565919 NCBI chrNW_004624781:15,292,047...15,337,466
Ensembl chrNW_004624781:15,291,416...15,328,173 		JBrowse link
G Nme8 NME/NM23 family member 8 located_in ISO (MGI:2680785|PMID:12909633) ARUK-UCL PMID:12909633 MGI:2680785 NCBI chrNW_004624740:23,351,832...23,396,905
Ensembl chrNW_004624740:23,349,858...23,396,888 		JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:5,439,764...5,460,822 JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 located_in ISO (PMID:23849778), (PMID:24203976) SYSCILIA_CCNET PMID:23849778 PMID:24203976 NCBI chrNW_004624805:6,192,843...6,365,982
Ensembl chrNW_004624805:6,193,217...6,362,776 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 located_in ISO (PMID:33347437)
(PMID:27486780)		 MGI
GO_Central		 PMID:27486780 PMID:33347437 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737 		JBrowse link
G Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 located_in ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chrNW_004624730:6,642,195...6,744,480
Ensembl chrNW_004624730:6,642,190...6,744,470 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744 		JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:3,552,608...3,575,461
Ensembl chrNW_004624870:3,552,745...3,574,880 		JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chrNW_004624730:2,743,921...2,807,270 JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin is_active_in ISO (PMID:34463328) MGI PMID:34463328 NCBI chrNW_004624733:29,134,720...29,147,261 JBrowse link
G Rp1 RP1 axonemal microtubule associated located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:1,129,333...1,179,387
Ensembl chrNW_004624735:1,093,929...1,179,265 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO (PMID:19657028)
(MGI:4353917|PMID:19657028)		 UniProt PMID:19657028 MGI:4353917 NCBI chrNW_004624758:24,480,805...24,516,524 JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (PMID:11104772) MGI PMID:11104772 NCBI chrNW_004624825:7,289,385...7,366,388
Ensembl chrNW_004624825:7,296,662...7,366,196 		JBrowse link
G Rpgrip1l RPGRIP1 like located_in ISO (PMID:17558409) MGI PMID:17558409 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115 		JBrowse link
G Rsph1 radial spoke head component 1 located_in ISO (PMID:34871179) MGI PMID:34871179 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529 		JBrowse link
G Rsph4a radial spoke head component 4A located_in IEA TreeGrafter
UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
G Rsph6a radial spoke head 6 homolog A located_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624832:7,394,396...7,409,603
Ensembl chrNW_004624832:7,393,663...7,409,458 		JBrowse link
G Rsph9 radial spoke head component 9 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:16,020,566...16,042,088
Ensembl chrNW_004624754:16,029,449...16,041,775 		JBrowse link
G Septin2 septin 2 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004624847:5,341,177...5,382,920
Ensembl chrNW_004624847:5,341,467...5,385,065 		JBrowse link
G Septin7 septin 7 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004624740:25,083,414...25,179,493 JBrowse link
G Septin9 septin 9 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chrNW_004624801:6,988,914...7,156,469
Ensembl chrNW_004624801:6,988,904...7,159,072 		JBrowse link
G Spag16 sperm associated antigen 16 located_in ISO (PMID:19305393)
(MGI:3844768|PMID:19305393)		 UniProt PMID:19305393 MGI:3844768 NCBI chrNW_004624765:2,548,748...2,886,134 JBrowse link
G Spag6 sperm associated antigen 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624796:380,564...444,709
Ensembl chrNW_004624796:403,411...444,229 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:13,869,210...13,943,864
Ensembl chrNW_004624734:13,879,522...13,943,703 		JBrowse link
G Spef1 sperm flagellar 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:4,861,992...4,868,261
Ensembl chrNW_004624741:4,862,872...4,866,783 		JBrowse link
G Ssna1 SS nuclear autoantigen 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:759,471...760,797
Ensembl chrNW_004624760:759,469...760,797 		JBrowse link
G Tmem67 transmembrane protein 67 located_in ISO RGD PMID:23516626 RGD:11535084 NCBI chrNW_004624763:1,219,779...1,281,297
Ensembl chrNW_004624763:1,219,827...1,264,071 		JBrowse link
G Togaram1 TOG array regulator of axonemal microtubules 1 located_in ISO (PMID:32453716) UniProt PMID:32453716 NCBI chrNW_004624731:23,465,516...23,542,960
Ensembl chrNW_004624731:23,461,859...23,542,950 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,424,388...3,469,708
Ensembl chrNW_004624847:3,424,365...3,472,075 		JBrowse link
G Ttll10 tubulin tyrosine ligase like 10 located_in ISO (PMID:19524510)
(MGI:3850271|PMID:19524510)		 UniProt PMID:19524510 MGI:3850271 NCBI chrNW_004624818:8,382,673...8,389,891 JBrowse link
G Ttll8 tubulin tyrosine ligase like 8 located_in ISO (PMID:19524510), (PMID:33414192)
(MGI:3850271|PMID:19524510), (MGI:6501614|PMID:33414192)		 UniProt PMID:19524510 PMID:33414192 MGI:3850271 MGI:6501614 NCBI chrNW_004624752:686,043...694,256 JBrowse link
G Tubb4a tubulin beta 4A class IVa located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chrNW_004624828:3,588,001...3,594,294
Ensembl chrNW_004624828:3,584,848...3,594,294 		JBrowse link
G Tulp3 TUB like protein 3 located_in ISO (PMID:19286674) MGI PMID:19286674 NCBI chrNW_004624860:232,838...301,299
Ensembl chrNW_004624860:232,936...299,225 		JBrowse link
G Wdr11 WD repeat domain 11 located_in ISO (MGI:6116377|PMID:29263200)
(PMID:29263200)		 UniProt PMID:29263200 MGI:6116377 NCBI chrNW_004624737:25,762,289...25,818,161
Ensembl chrNW_004624737:25,763,023...25,818,199 		JBrowse link
G Wdr35 WD repeat domain 35 located_in ISO (MGI:4950635|PMID:21473986) UniProt PMID:21473986 MGI:4950635 NCBI chrNW_004624738:2,618,464...2,720,567
Ensembl chrNW_004624738:2,618,738...2,623,166
Ensembl chrNW_004624738:2,618,738...2,623,166 		JBrowse link
ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync2i2 dynein 2 intermediate chain 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:6,321,195...6,331,784
Ensembl chrNW_004624760:6,321,172...6,331,532 		JBrowse link
G Nek4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chrNW_004624822:4,454,040...4,500,031
Ensembl chrNW_004624822:4,453,379...4,502,579 		JBrowse link
dendrite cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase located_in ISO (MGI:6094388|PMID:27307232) UniProt PMID:27307232 MGI:6094388 NCBI chrNW_004624939:212,910...272,112
Ensembl chrNW_004624939:213,007...273,786 		JBrowse link
G Abhd13 abhydrolase domain containing 13 located_in ISO (MGI:6094388|PMID:27307232) UniProt PMID:27307232 MGI:6094388 NCBI chrNW_004624793:3,681,673...3,697,495
Ensembl chrNW_004624793:3,681,673...3,695,654 		JBrowse link
G Ada adenosine deaminase ISO RGD PMID:2253038 RGD:2291858 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883 		JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649 		JBrowse link
G Canx calnexin ISO RGD PMID:10461883 RGD:2313156 NCBI chrNW_004624733:42,588,680...42,616,624 JBrowse link
G Cdkl5 cyclin dependent kinase like 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624829:3,288,239...3,479,620
Ensembl chrNW_004624829:3,356,580...3,472,832 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in ISO PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 ISO RGD PMID:16650615 RGD:4890439 NCBI chrNW_004624752:26,971,266...26,979,483
Ensembl chrNW_004624752:26,971,187...26,981,929 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:17207780 RGD:1642304 NCBI chrNW_004624848:1,132,939...1,261,110
Ensembl chrNW_004624848:1,135,032...1,261,087 		JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 ISO RGD PMID:15844209 RGD:1642495 NCBI chrNW_004624810:2,731,573...3,407,186
Ensembl chrNW_004624810:2,733,118...3,401,909 		JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 ISO RGD PMID:15844209 RGD:1642495 NCBI chrNW_004624764:19,649,780...19,860,077
Ensembl chrNW_004624764:19,655,782...19,860,119 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hpca hippocalcin ISO RGD PMID:8233019 RGD:9686436 NCBI chrNW_004624764:15,990,910...15,999,617
Ensembl chrNW_004624764:15,990,729...15,999,615 		JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:8756417 RGD:9743934 NCBI chrNW_004624730:33,701,386...34,141,269
Ensembl chrNW_004624730:33,876,381...34,139,594 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO (MGI:5424048|PMID:22514311) GOC PMID:22514311 MGI:5424048 NCBI chrNW_004624764:5,682,800...5,724,852
Ensembl chrNW_004624764:5,682,829...5,724,656 		JBrowse link
G Kif5a kinesin family member 5A located_in ISO (MGI:5819356|PMID:11986669) GOC PMID:11986669 MGI:5819356 NCBI chrNW_004624802:10,375,132...10,409,575
Ensembl chrNW_004624802:10,375,774...10,409,566 		JBrowse link
G Klhl17 kelch like family member 17 ISO RGD PMID:12063253 RGD:625502 NCBI chrNW_004624818:8,545,562...8,551,348
Ensembl chrNW_004624818:8,546,137...8,550,603 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 located_in ISO (PMID:21696411) BHF-UCL PMID:21696411 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Map2 microtubule associated protein 2 located_in ISO PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chrNW_004624765:6,476,544...6,758,959
Ensembl chrNW_004624765:6,476,346...6,546,116 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:9714150 RGD:2293331 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:9714150 RGD:2293331 NCBI chrNW_004624786:14,457,382...14,597,027
Ensembl chrNW_004624786:14,457,452...14,597,027 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:9714150 RGD:2293331 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO RGD PMID:9714150 RGD:2293331 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266 		JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:16194531 RGD:2316627 NCBI chrNW_004624785:4,147,079...4,195,712
Ensembl chrNW_004624785:4,032,689...4,196,186 		JBrowse link
G Pura purine rich element binding protein A located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chrNW_004624743:32,878,677...32,888,650
Ensembl chrNW_004624743:32,884,552...32,885,517 		JBrowse link
G Sfpq splicing factor proline and glutamine rich located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340 		JBrowse link
G Sod1 superoxide dismutase 1 located_in ISO (PMID:17324120) UniProt PMID:17324120 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624790:6,173,160...6,229,487
Ensembl chrNW_004624790:6,172,762...6,229,487 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127 		JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in ISO (MGI:3835232|PMID:19015237)
(PMID:19015237)		 BHF-UCL PMID:19015237 MGI:3835232 NCBI chrNW_004624826:941,200...966,470
Ensembl chrNW_004624826:941,190...962,466 		JBrowse link
G Wls Wnt ligand secretion mediator ISO RGD PMID:22001156 RGD:7488965 NCBI chrNW_004624742:27,481,480...27,570,439
Ensembl chrNW_004624742:27,481,427...27,570,439 		JBrowse link
G Zc3h14 zinc finger CCCH-type containing 14 located_in ISO (PMID:28793261) FlyBase PMID:28793261 NCBI chrNW_004624734:13,734,406...13,787,341
Ensembl chrNW_004624734:13,734,401...13,788,057 		JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chrNW_004624801:10,106,815...10,173,191
Ensembl chrNW_004624801:10,106,750...10,173,188 		JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah9 dynein axonemal heavy chain 9 located_in ISO (PMID:26909801), (PMID:30471717)
(PMID:33347437)		 GO_Central
MGI		 PMID:26909801 PMID:30471717 PMID:33347437 NCBI chrNW_004624786:14,031,785...14,411,469
Ensembl chrNW_004624786:14,031,718...14,411,533 		JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah1 dynein axonemal heavy chain 1 part_of ISO (PMID:24360805) SYSCILIA_CCNET PMID:24360805 NCBI chrNW_004624822:4,818,972...4,882,076
Ensembl chrNW_004624822:4,819,019...4,878,438 		JBrowse link
G Dnah2 dynein axonemal heavy chain 2 part_of ISO (PMID:30811583) UniProt PMID:30811583 NCBI chrNW_004624786:10,311,183...10,413,236
Ensembl chrNW_004624786:10,311,214...10,413,037 		JBrowse link
G Dnah7 dynein axonemal heavy chain 7 part_of ISO (PMID:11877439) SYSCILIA_CCNET PMID:11877439 NCBI chrNW_004624854:912,986...1,180,639
Ensembl chrNW_004624854:912,992...1,162,920 		JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:12,369,903...12,463,184
Ensembl chrNW_004624742:12,369,834...12,463,215 		JBrowse link
neuron projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit ISO MMO:0000293, MMO:0000656 RGD PMID:19385992 RGD:152995360 NCBI chrNW_004624758:22,182,468...22,200,076
Ensembl chrNW_004624758:22,182,951...22,200,063 		JBrowse link
neuronal ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity regulated cytoskeleton associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:13,968,628...13,972,026
Ensembl chrNW_004624735:13,968,654...13,972,026 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (PMID:23936366) MGI PMID:23936366 NCBI chrNW_004624767:1,761,983...1,874,534
Ensembl chrNW_004624767:1,761,733...1,874,534 		JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 is_active_in ISO (PMID:30765518) UniProt PMID:30765518 NCBI chrNW_004624754:4,523,616...4,553,994
Ensembl chrNW_004624754:4,523,661...4,549,936 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 located_in
is_active_in		 ISO (MGI:3798322|PMID:18539120), (PMID:21933836)
(PMID:30765518)
PMID:17881655		 UniProt
MGI		 PMID:17881655 PMID:18539120 PMID:21933836 PMID:30765518 MGI:3798322 RGD:8553560 NCBI chrNW_004624883:645,524...681,705
Ensembl chrNW_004624883:645,449...682,292 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:14523087 RGD:9685480 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chrNW_004624733:41,387,068...41,403,701
Ensembl chrNW_004624733:41,398,123...41,403,617 		JBrowse link
G Htt huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333 		JBrowse link
G Kif3c kinesin family member 3C located_in ISO PMID:17881655 MGI PMID:17881655 RGD:8553560 NCBI chrNW_004624738:8,128,594...8,171,638
Ensembl chrNW_004624738:8,127,797...8,171,697 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:680,929...684,251
Ensembl chrNW_004624893:681,167...684,251 		JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624826:941,200...966,470
Ensembl chrNW_004624826:941,190...962,466 		JBrowse link
outer dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624795:404,102...407,025
Ensembl chrNW_004624795:404,068...406,979 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 part_of ISO (PMID:31621862) UniProt PMID:31621862 NCBI chrNW_004624754:6,923,431...6,977,007
Ensembl chrNW_004624754:6,923,632...6,973,670 		JBrowse link
G Dnah17 dynein axonemal heavy chain 17 part_of ISO (PMID:31178125) UniProt PMID:31178125 NCBI chrNW_004624801:7,901,329...8,015,433
Ensembl chrNW_004624801:7,901,503...8,013,303 		JBrowse link
G Dnah5 dynein axonemal heavy chain 5 part_of ISO (PMID:16627867)
(PMID:27353389)
(PMID:11062149), (PMID:11788826), (PMID:22499950)		 SYSCILIA_CCNET
MGI		 PMID:11062149 PMID:11788826 PMID:16627867 PMID:22499950 PMID:27353389 NCBI chrNW_004624751:10,799,102...11,110,180
Ensembl chrNW_004624751:10,799,892...11,050,403 		JBrowse link
G Dnah9 dynein axonemal heavy chain 9 part_of ISO (PMID:27353389) MGI PMID:27353389 NCBI chrNW_004624786:14,031,785...14,411,469
Ensembl chrNW_004624786:14,031,718...14,411,533 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:38,858,918...38,922,092
Ensembl chrNW_004624736:38,859,050...38,922,097 		JBrowse link
G Dnai2 dynein axonemal intermediate chain 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:4,252,779...4,284,432
Ensembl chrNW_004624801:4,252,814...4,280,227 		JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 part_of ISO (PMID:27353389) MGI PMID:27353389 NCBI chrNW_004624787:9,103,392...9,164,695
Ensembl chrNW_004624787:9,103,271...9,167,043 		JBrowse link
G Nme8 NME/NM23 family member 8 part_of ISO (PMID:17360648) SYSCILIA_CCNET PMID:17360648 NCBI chrNW_004624740:23,351,832...23,396,905
Ensembl chrNW_004624740:23,349,858...23,396,888 		JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 part_of ISO (PMID:23261303) UniProt PMID:23261303 NCBI chrNW_004624832:5,439,764...5,460,822 JBrowse link
outer dynein arm docking complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odad4 outer dynein arm docking complex subunit 4 part_of ISO (PMID:27486780) GO_Central PMID:27486780 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737 		JBrowse link
proximal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein axonemal heavy chain 11 located_in ISO (PMID:26909801)
(PMID:26909801), (PMID:33347437)		 GO_Central
MGI		 PMID:26909801 PMID:33347437 NCBI chrNW_004624739:8,810,127...9,136,044
Ensembl chrNW_004624739:8,811,082...9,135,815 		JBrowse link
radial spoke term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 part_of ISO (PMID:36417862)
(MGI:7407981|PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624817:3,078,578...3,093,273
Ensembl chrNW_004624817:3,077,086...3,093,117 		JBrowse link
G Dydc1 DPY30 domain containing 1 part_of ISO (MGI:7407981|PMID:36417862) UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624841:6,805,729...6,827,463
Ensembl chrNW_004624841:6,809,618...6,827,412 		JBrowse link
G Iqub IQ motif and ubiquitin domain containing part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:12,442,288...12,509,647
Ensembl chrNW_004624783:12,454,710...12,510,206 		JBrowse link
G Nme5 NME/NM23 family member 5 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:30,925,210...30,950,129
Ensembl chrNW_004624743:30,925,445...30,950,114 		JBrowse link
G Ropn1l rhophilin associated tail protein 1 like part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624751:7,787,878...7,798,296
Ensembl chrNW_004624751:7,787,600...7,798,237 		JBrowse link
G Rsph1 radial spoke head component 1 part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529 		JBrowse link
G Rsph14 radial spoke head 14 homolog part_of ISO (PMID:36417862)
(MGI:7407981|PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624747:9,416,411...9,504,561
Ensembl chrNW_004624747:9,416,373...9,502,716 		JBrowse link
G Rsph4a radial spoke head component 4A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
G Rsph6a radial spoke head 6 homolog A part_of IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:7,394,396...7,409,603
Ensembl chrNW_004624832:7,393,663...7,409,458 		JBrowse link
G Rsph9 radial spoke head component 9 part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chrNW_004624754:16,020,566...16,042,088
Ensembl chrNW_004624754:16,029,449...16,041,775 		JBrowse link
radial spoke head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph1 radial spoke head component 1 part_of ISO (MGI:7447185|PMID:34871179) UniProt PMID:34871179 MGI:7447185 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529 		JBrowse link
G Rsph4a radial spoke head component 4A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
G Rsph6a radial spoke head 6 homolog A part_of ISO (PMID:34871179)
(PMID:30185526)
(MGI:7447185|PMID:34871179)		 UniProt
MGI		 PMID:30185526 PMID:34871179 MGI:7447185 NCBI chrNW_004624832:7,394,396...7,409,603
Ensembl chrNW_004624832:7,393,663...7,409,458 		JBrowse link
G Rsph9 radial spoke head component 9 part_of ISO (MGI:7447185|PMID:34871179)
(PMID:34871179)		 UniProt PMID:34871179 MGI:7447185 NCBI chrNW_004624754:16,020,566...16,042,088
Ensembl chrNW_004624754:16,029,449...16,041,775 		JBrowse link
radial spoke head 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph1 radial spoke head component 1 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529 		JBrowse link
G Rsph4a radial spoke head component 4A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
G Rsph9 radial spoke head component 9 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chrNW_004624754:16,020,566...16,042,088
Ensembl chrNW_004624754:16,029,449...16,041,775 		JBrowse link
radial spoke head 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph4a radial spoke head component 4A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
radial spoke head 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph1 radial spoke head component 1 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chrNW_004624745:28,009,028...28,020,007
Ensembl chrNW_004624745:28,008,959...28,021,529 		JBrowse link
G Rsph4a radial spoke head component 4A part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:13,022,429...13,046,836
Ensembl chrNW_004624798:13,023,982...13,046,116 		JBrowse link
G Rsph9 radial spoke head component 9 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chrNW_004624754:16,020,566...16,042,088
Ensembl chrNW_004624754:16,029,449...16,041,775 		JBrowse link
radial spoke stalk term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap61 cilia and flagella associated protein 61 part_of ISO (PMID:34792097) MGI PMID:34792097 NCBI chrNW_004624741:20,581,691...20,856,165 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15769
    cellular anatomical structure 15669
      cytoplasm 9890
        cytoplasmic region 285
          plasma membrane bounded cell projection cytoplasm 248
            ciliary plasm + 178
            neuron projection cytoplasm + 71
Path 2
Term Annotations click to browse term
  cellular_component 15769
    cellular anatomical structure 15669
      intracellular anatomical structure 12410
        cytoplasm 9890
          cytoplasmic region 285
            plasma membrane bounded cell projection cytoplasm 248
              ciliary plasm + 178
              neuron projection cytoplasm + 71
paths to the root