Cfap184 (cilia and flagella associated protein 184) - Rat Genome Database

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Gene: Cfap184 (cilia and flagella associated protein 184) Heterocephalus glaber
Analyze
Symbol: Cfap184
Name: cilia and flagella associated protein 184
RGD ID: 18915161
Description: INVOLVED IN cilium assembly (inferred); ASSOCIATED WITH genetic disease (ortholog); orofaciodigital syndrome (ortholog); FOUND IN axoneme (inferred); ciliary basal body (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Ccdc96; coiled-coil domain containing 96; Coiled-coil domain-containing protein 96
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475523,257,680 - 23,262,292 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Cfap184
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475523,257,680 - 23,262,292 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CFAP184
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3847,040,849 - 7,043,001 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl47,040,849 - 7,043,001 (-)EnsemblGRCh38hg38GRCh38
GRCh3747,042,576 - 7,044,728 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3647,093,477 - 7,095,629 (-)NCBINCBI36Build 36hg18NCBI36
Celera46,945,993 - 6,948,145 (-)NCBICelera
Cytogenetic Map4p16.1NCBI
HuRef46,969,791 - 6,971,943 (-)NCBIHuRef
CHM1_147,041,153 - 7,043,305 (-)NCBICHM1_1
T2T-CHM13v2.047,012,684 - 7,014,836 (-)NCBIT2T-CHM13v2.0
Ccdc96
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39536,641,932 - 36,645,515 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl536,641,932 - 36,645,516 (+)EnsemblGRCm39 Ensembl
GRCm38536,484,588 - 36,488,171 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl536,484,588 - 36,488,172 (+)EnsemblGRCm38mm10GRCm38
MGSCv37536,827,237 - 36,830,820 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36536,801,683 - 36,805,266 (+)NCBIMGSCv36mm8
Celera533,965,575 - 33,969,160 (+)NCBICelera
Cytogenetic Map5B3NCBI
cM Map519.14NCBI
Ccdc96
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81478,501,256 - 78,503,715 (-)NCBIGRCr8
mRatBN7.21474,276,568 - 74,279,072 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1474,276,960 - 74,278,888 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01479,443,151 - 79,445,591 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1479,443,543 - 79,445,471 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01479,082,161 - 79,084,549 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41479,857,379 - 79,859,699 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11479,860,160 - 79,862,090 (-)NCBI
Celera1473,214,778 - 73,217,218 (-)NCBICelera
Cytogenetic Map14q21NCBI
Cfap184
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555143,478,667 - 3,480,747 (+)NCBIChiLan1.0ChiLan1.0
CFAP184
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v237,305,425 - 7,309,589 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan147,236,208 - 7,238,626 (-)NCBINHGRI_mPanPan1
PanPan1.147,108,106 - 7,110,318 (-)NCBIpanpan1.1PanPan1.1panPan2
CFAP184
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1359,105,113 - 59,108,866 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl359,105,544 - 59,106,566 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha361,751,518 - 61,754,233 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0359,576,271 - 59,578,986 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1359,073,571 - 59,076,285 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0359,275,482 - 59,278,197 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0359,629,793 - 59,632,508 (-)NCBIUU_Cfam_GSD_1.0
Cfap184
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528565,161,461 - 65,166,781 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493647718,864,940 - 18,868,473 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFAP184
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.183,828,389 - 3,831,310 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.283,377,817 - 3,380,598 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CFAP184
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12743,150,557 - 43,157,211 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604790,009,631 - 90,012,037 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004847332   ⟹   XP_004847389
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475523,257,680 - 23,262,292 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004847389 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB03672 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004847389   ⟸   XM_004847332
- UniProtKB: G5B2Z7 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
InterPro DUF4201 UniProtKB/TrEMBL
NCBI Gene Ccdc96 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 96 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam DUF4201 UniProtKB/TrEMBL
UniProt G5B2Z7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-12-26 Cfap184  cilia and flagella associated protein 184  Ccdc96  coiled-coil domain containing 96  Symbol and/or name change 5135510 APPROVED