Map2 (microtubule associated protein 2) - Rat Genome Database

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Gene: Map2 (microtubule associated protein 2) Heterocephalus glaber
Analyze
Symbol: Map2
Name: microtubule associated protein 2
RGD ID: 18900290
Description: ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axonogenesis (ortholog); cellular response to organic substance (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); arteriovenous malformation (ortholog); asphyxia neonatorum (ortholog); FOUND IN actin cytoskeleton (ortholog); apical dendrite (ortholog); apical distal dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: microtubule-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247656,476,346 - 6,546,116 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247656,476,544 - 6,758,959 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Map2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247656,476,346 - 6,546,116 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247656,476,544 - 6,758,959 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382209,424,047 - 209,734,112 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2209,424,047 - 209,734,147 (+)EnsemblGRCh38hg38GRCh38
GRCh372210,288,771 - 210,598,836 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362209,997,016 - 210,307,079 (+)NCBINCBI36Build 36hg18NCBI36
Build 342210,269,908 - 210,421,484NCBI
Celera2204,056,618 - 204,366,628 (+)NCBICelera
Cytogenetic Map2q34NCBI
HuRef2202,133,889 - 202,443,633 (+)NCBIHuRef
CHM1_12210,294,619 - 210,604,654 (+)NCBICHM1_1
T2T-CHM13v2.02209,904,237 - 210,214,222 (+)NCBIT2T-CHM13v2.0
Map2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39166,214,337 - 66,481,742 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl166,214,432 - 66,481,742 (+)EnsemblGRCm39 Ensembl
GRCm38166,175,202 - 66,442,583 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl166,175,273 - 66,442,583 (+)EnsemblGRCm38mm10GRCm38
MGSCv37166,221,903 - 66,489,157 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36166,108,521 - 66,375,797 (+)NCBIMGSCv36mm8
Celera166,699,319 - 66,964,492 (+)NCBICelera
Cytogenetic Map1C3NCBI
cM Map133.49NCBI
Map2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8975,173,038 - 75,431,606 (+)NCBIGRCr8
mRatBN7.2967,723,422 - 67,981,886 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl967,723,371 - 67,979,809 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx976,387,776 - 76,469,106 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0981,515,139 - 81,596,514 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0979,899,162 - 79,986,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0973,204,753 - 73,462,965 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl973,319,710 - 73,462,972 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0973,837,509 - 74,095,431 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4965,174,376 - 65,256,003 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1965,321,360 - 65,402,977 (+)NCBI
Celera965,377,941 - 65,459,391 (+)NCBICelera
RH 3.4 Map9593.2RGD
Cytogenetic Map9q32NCBI
Map2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554575,678,436 - 5,875,024 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554575,678,826 - 5,816,114 (-)NCBIChiLan1.0ChiLan1.0
MAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213112,046,732 - 112,357,145 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B112,061,728 - 112,372,130 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B96,681,268 - 96,991,650 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B215,085,476 - 215,395,439 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B215,314,857 - 215,391,728 (+)Ensemblpanpan1.1panPan2
MAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13717,316,899 - 17,611,360 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3717,466,678 - 17,607,803 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3718,197,871 - 18,492,089 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03717,252,304 - 17,547,172 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3717,260,892 - 17,545,422 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13717,357,768 - 17,502,660 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03717,171,196 - 17,465,399 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03717,188,565 - 17,479,742 (+)NCBIUU_Cfam_GSD_1.0
Map2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303165,843,181 - 166,122,293 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936845473,366 - 545,135 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936845475,406 - 752,600 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15112,236,119 - 112,462,929 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115112,156,578 - 112,462,932 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215124,033,358 - 124,184,546 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11095,319,649 - 95,431,106 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1095,349,157 - 95,431,320 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040103,915,685 - 104,226,077 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004851133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021263530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01045439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01045440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01045441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01045442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01045443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000013799   ⟹   ENSHGLP00000013658
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247656,476,346 - 6,546,116 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000013800   ⟹   ENSHGLP00000013659
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247656,476,549 - 6,546,096 (-)Ensembl
RefSeq Acc Id: XM_004851133   ⟹   XP_004851190
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,697 (-)NCBI
RefSeq Acc Id: XM_021263512   ⟹   XP_021119171
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,718 (-)NCBI
RefSeq Acc Id: XM_021263513   ⟹   XP_021119172
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,758,959 (-)NCBI
RefSeq Acc Id: XM_021263514   ⟹   XP_021119173
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,711,557 (-)NCBI
RefSeq Acc Id: XM_021263515   ⟹   XP_021119174
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,758,959 (-)NCBI
RefSeq Acc Id: XM_021263516   ⟹   XP_021119175
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,711,556 (-)NCBI
RefSeq Acc Id: XM_021263517   ⟹   XP_021119176
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,577,180 (-)NCBI
RefSeq Acc Id: XM_021263519   ⟹   XP_021119178
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,719 (-)NCBI
RefSeq Acc Id: XM_021263520   ⟹   XP_021119179
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,719 (-)NCBI
RefSeq Acc Id: XM_021263521   ⟹   XP_021119180
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,717 (-)NCBI
RefSeq Acc Id: XM_021263522   ⟹   XP_021119181
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,717 (-)NCBI
RefSeq Acc Id: XM_021263523   ⟹   XP_021119182
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,718 (-)NCBI
RefSeq Acc Id: XM_021263524   ⟹   XP_021119183
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,717 (-)NCBI
RefSeq Acc Id: XM_021263525   ⟹   XP_021119184
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,718 (-)NCBI
RefSeq Acc Id: XM_021263526   ⟹   XP_021119185
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,716 (-)NCBI
RefSeq Acc Id: XM_021263527   ⟹   XP_021119186
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,716 (-)NCBI
RefSeq Acc Id: XM_021263528   ⟹   XP_021119187
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,500,975 - 6,607,727 (-)NCBI
RefSeq Acc Id: XM_021263530   ⟹   XP_021119189
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247656,476,544 - 6,607,692 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021119174   ⟸   XM_021263515
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119172   ⟸   XM_021263513
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119173   ⟸   XM_021263514
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119175   ⟸   XM_021263516
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119179   ⟸   XM_021263520
- Peptide Label: isoform X3
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119178   ⟸   XM_021263519
- Peptide Label: isoform X2
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119184   ⟸   XM_021263525
- Peptide Label: isoform X8
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119182   ⟸   XM_021263523
- Peptide Label: isoform X6
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119171   ⟸   XM_021263512
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119183   ⟸   XM_021263524
- Peptide Label: isoform X7
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119181   ⟸   XM_021263522
- Peptide Label: isoform X5
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119180   ⟸   XM_021263521
- Peptide Label: isoform X4
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119186   ⟸   XM_021263527
- Peptide Label: isoform X10
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119185   ⟸   XM_021263526
- Peptide Label: isoform X9
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004851190   ⟸   XM_004851133
- Peptide Label: isoform X12
RefSeq Acc Id: XP_021119189   ⟸   XM_021263530
- Peptide Label: isoform X13
RefSeq Acc Id: XP_021119176   ⟸   XM_021263517
- Peptide Label: isoform X1
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021119187   ⟸   XM_021263528
- Peptide Label: isoform X11
- UniProtKB: G5AL24 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000013658   ⟸   ENSHGLT00000013799
RefSeq Acc Id: ENSHGLP00000013659   ⟸   ENSHGLT00000013800


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000009762 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000013799 ENTREZGENE
  ENSHGLT00000013800 ENTREZGENE
InterPro MAP2/MAP4/Tau UniProtKB/TrEMBL
  MAP2_projctn UniProtKB/TrEMBL
  MAP_tubulin-bd_rpt UniProtKB/TrEMBL
NCBI Gene Map2 ENTREZGENE
PANTHER MICROTUBULE-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  MICROTUBULE-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
Pfam MAP2_projctn UniProtKB/TrEMBL
  Tubulin-binding UniProtKB/TrEMBL
PROSITE TAU_MAP_1 UniProtKB/TrEMBL
  TAU_MAP_2 UniProtKB/TrEMBL
UniProt G5AL24 ENTREZGENE, UniProtKB/TrEMBL