Dnai7 (dynein axonemal intermediate chain 7) - Rat Genome Database

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Gene: Dnai7 (dynein axonemal intermediate chain 7) Heterocephalus glaber
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Symbol: Dnai7
Name: dynein axonemal intermediate chain 7 (Ensembl:cancer susceptibility 1)
RGD ID: 18936159
Description: ENCODES a protein that exhibits beta-tubulin binding (inferred); microtubule binding (inferred); ASSOCIATED WITH lung cancer (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cancer susceptibility 1; cancer susceptibility candidate 1; cancer susceptibility candidate protein 1 homolog; Casc1; Cfap94; cilia and flagella associated protein 94; protein CASC1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475213,855,426 - 13,936,764 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475213,855,328 - 13,932,210 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnai7Naked Mole-Ratlung cancer amelioratesISORGD:16172289068941DNA:missense mutation:CDS:p.N60S (mouse)RGDPMID:14583591|REF_RGD_ID:152998907
Dnai7Naked Mole-RatLung Neoplasms susceptibilityISORGD:16172289068941 RGDPMID:16862160|REF_RGD_ID:11340955
Dnai7Naked Mole-Ratlung non-small cell carcinoma amelioratesISORGD:16172289068941 RGDPMID:24860162|REF_RGD_ID:152998908
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnai7Naked Mole-RatLung Neoplasms  ISORGD:13225549068941CTD Direct Evidence: marker/mechanismCTDPMID:15064703


Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnai7Naked Mole-Rataxonemal dynein complex part_ofISORGD:16172289068941 PMID:30060180UniProtPMID:30060180
Dnai7Naked Mole-Rataxoneme located_inIEAPANTHER:PTN000467975150520179 TreeGrafterGO_REF:0000118
Dnai7Naked Mole-Ratcilium located_inISORGD:16172289068941 PMID:30060180UniProtPMID:30060180
Dnai7Naked Mole-Ratcytoplasm located_inISORGD:16172289068941 PMID:14583591UniProtPMID:14583591
Dnai7Naked Mole-Ratcytoplasmic microtubule is_active_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961
Dnai7Naked Mole-Ratcytoplasmic microtubule located_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961
Dnai7Naked Mole-Ratmicrotubule cytoskeleton located_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnai7Naked Mole-Ratbeta-tubulin binding enablesIEAPANTHER:PTN000467975150520179 TreeGrafterGO_REF:0000118
Dnai7Naked Mole-Ratmicrotubule binding enablesIEAPANTHER:PTN000467975150520179 TreeGrafterGO_REF:0000118
Dnai7Naked Mole-Ratprotein binding enablesISOUniProtKB:Q9NYB9-2|UniProtKB:Q9Y5B89068941 PMID:32296183IntActPMID:32296183

PMID:30032202  



Dnai7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475213,855,426 - 13,936,764 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475213,855,328 - 13,932,210 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DNAI7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381225,107,047 - 25,195,160 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1225,108,289 - 25,195,162 (-)EnsemblGRCh38hg38GRCh38
GRCh371225,261,223 - 25,348,094 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,152,490 - 25,239,361 (-)NCBINCBI36Build 36hg18NCBI36
Build 341225,152,489 - 25,239,361NCBI
Celera1230,408,204 - 30,495,049 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1225,031,916 - 25,118,815 (-)NCBIHuRef
CHM1_11225,226,353 - 25,313,239 (-)NCBICHM1_1
T2T-CHM13v2.01224,977,958 - 25,066,403 (-)NCBIT2T-CHM13v2.0
Dnai7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396145,120,556 - 145,156,866 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6145,120,560 - 145,156,731 (-)EnsemblGRCm39 Ensembl
GRCm386145,174,833 - 145,211,017 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6145,174,834 - 145,211,005 (-)EnsemblGRCm38mm10GRCm38
MGSCv376145,123,392 - 145,159,490 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366145,132,084 - 145,168,060 (-)NCBIMGSCv36mm8
Celera6148,249,078 - 148,285,257 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.37NCBI
Dnai7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84179,874,338 - 179,910,716 (-)NCBIGRCr8
mRatBN7.24178,143,499 - 178,179,871 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4178,143,500 - 178,179,980 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4184,444,178 - 184,480,647 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04180,228,678 - 180,265,147 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04178,849,095 - 178,885,568 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04179,440,984 - 179,476,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4179,440,953 - 179,477,070 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04243,622,214 - 243,658,236 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44182,823,026 - 182,859,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14183,068,145 - 183,104,849 (-)NCBI
Celera4166,662,914 - 166,699,171 (-)NCBICelera
Cytogenetic Map4q44NCBI
Dnai7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541320,227,903 - 20,287,131 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541320,227,807 - 20,287,211 (-)NCBIChiLan1.0ChiLan1.0
DNAI7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21071,620,868 - 71,707,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11271,617,264 - 71,704,233 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01261,117,886 - 61,204,888 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11263,733,801 - 63,819,991 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1263,733,785 - 63,819,991 (+)Ensemblpanpan1.1panPan2
DNAI7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12722,309,705 - 22,369,052 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2722,303,849 - 22,369,051 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2723,999,487 - 24,071,297 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02722,502,481 - 22,568,288 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2722,502,580 - 22,568,282 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12722,317,692 - 22,384,301 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02722,336,520 - 22,403,282 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02724,171,481 - 24,238,226 (-)NCBIUU_Cfam_GSD_1.0
Dnai7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494584,200,357 - 84,274,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365482,123,360 - 2,202,032 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365482,123,248 - 2,197,245 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAI7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl548,555,688 - 48,651,365 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1548,555,637 - 48,651,370 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DNAI7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11124,871,767 - 24,953,586 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1124,875,416 - 24,953,375 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.






Ensembl Acc Id: ENSHGLT00000025235   ⟹   ENSHGLP00000025013
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475213,855,426 - 13,936,764 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000025236   ⟹   ENSHGLP00000025014
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475213,862,334 - 13,936,764 (+)Ensembl
RefSeq Acc Id: XM_021259081   ⟹   XP_021114740
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,863,353 - 13,932,210 (+)NCBI
RefSeq Acc Id: XM_021259082   ⟹   XP_021114741
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,863,353 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259083   ⟹   XP_021114742
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,855,328 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259084   ⟹   XP_021114743
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,855,355 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259085   ⟹   XP_021114744
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,880,158 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259086   ⟹   XP_021114745
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,855,451 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259087   ⟹   XP_021114746
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,877,140 - 13,932,021 (+)NCBI
RefSeq Acc Id: XM_021259088   ⟹   XP_021114747
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475213,869,943 - 13,932,021 (+)NCBI
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: XP_021114742   ⟸   XM_021259083
- Peptide Label: isoform X3
- UniProtKB: A0AAX6T445 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114743   ⟸   XM_021259084
- Peptide Label: isoform X4
- UniProtKB: A0AAX6T2J9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114745   ⟸   XM_021259086
- Peptide Label: isoform X1
- UniProtKB: A0AAX6T1M5 (UniProtKB/TrEMBL),   G5BEH7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114740   ⟸   XM_021259081
- Peptide Label: isoform X1
- UniProtKB: A0AAX6T1M5 (UniProtKB/TrEMBL),   G5BEH7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021114741   ⟸   XM_021259082
- Peptide Label: isoform X2
- UniProtKB: A0AAX6T2C0 (UniProtKB/TrEMBL),   G5BEH7 (UniProtKB/TrEMBL)



1 to 18 of 18 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000017827 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000025235 ENTREZGENE
  ENSHGLT00000025236 ENTREZGENE
InterPro CASC1_C UniProtKB/TrEMBL
  IC97/Casc1_N UniProtKB/TrEMBL
  IC97/Dnai7-like UniProtKB/TrEMBL
NCBI Gene Casc1 ENTREZGENE
PANTHER DYNEIN AXONEMAL INTERMEDIATE CHAIN 7 UniProtKB/TrEMBL
  LUNG ADENOMA SUSCEPTIBILITY 1-RELATED UniProtKB/TrEMBL
Pfam Casc1_C UniProtKB/TrEMBL
  Casc1_N UniProtKB/TrEMBL
PRINTS CANCERSCCP1 UniProtKB/TrEMBL
UniProt A0AAX6T078 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T1M5 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T2C0 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T2J9 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T445 ENTREZGENE, UniProtKB/TrEMBL
  G5BEH7 ENTREZGENE, UniProtKB/TrEMBL
1 to 18 of 18 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-02-16 Dnai7  dynein axonemal intermediate chain 7  Cfap94  cilia and flagella associated protein 94  Symbol and/or name change 5135510 APPROVED
2020-05-12 Cfap94  cilia and flagella associated protein 94  Casc1  cancer susceptibility 1  Symbol and/or name change 5135510 APPROVED