DNAI7 (dynein axonemal intermediate chain 7) - Rat Genome Database

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Gene: DNAI7 (dynein axonemal intermediate chain 7) Chlorocebus sabaeus
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Symbol: DNAI7
Name: dynein axonemal intermediate chain 7
RGD ID: 18467684
Description: ENCODES a protein that exhibits beta-tubulin binding (inferred); microtubule binding (inferred); ASSOCIATED WITH lung cancer (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cancer susceptibility 1; cancer susceptibility candidate 1; CASC1; CFAP94; cilia and flagella associated protein 94; dynein intermediate chain CFAP94, axonemal; protein CASC1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11124,871,767 - 24,953,586 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1124,875,416 - 24,953,375 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Green Monkeylung cancer amelioratesISORGD:16172289068941DNA:missense mutation:CDS:p.N60S (mouse)RGDPMID:14583591|REF_RGD_ID:152998907
DNAI7Green MonkeyLung Neoplasms susceptibilityISORGD:16172289068941 RGDPMID:16862160|REF_RGD_ID:11340955
DNAI7Green Monkeylung non-small cell carcinoma amelioratesISORGD:16172289068941 RGDPMID:24860162|REF_RGD_ID:152998908
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Green MonkeyLung Neoplasms  ISORGD:13225549068941CTD Direct Evidence: marker/mechanismCTDPMID:15064703


Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Green Monkeyaxonemal dynein complex part_ofISORGD:16172289068941 PMID:30060180UniProtPMID:30060180
DNAI7Green Monkeyaxoneme located_inIEAPANTHER:PTN000467981150520179 TreeGrafterGO_REF:0000118
DNAI7Green Monkeycilium located_inISORGD:16172289068941 PMID:30060180UniProtPMID:30060180
DNAI7Green Monkeycytoplasm located_inISORGD:16172289068941 PMID:14583591UniProtPMID:14583591
DNAI7Green Monkeycytoplasmic microtubule is_active_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961
DNAI7Green Monkeycytoplasmic microtubule located_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961
DNAI7Green Monkeymicrotubule cytoskeleton located_inISORGD:16172289068941 PMID:17974961MGIPMID:17974961

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Green Monkeybeta-tubulin binding enablesIEAPANTHER:PTN000467981150520179 TreeGrafterGO_REF:0000118
DNAI7Green Monkeymicrotubule binding enablesIEAPANTHER:PTN000467981150520179 TreeGrafterGO_REF:0000118
DNAI7Green Monkeyprotein binding enablesISOUniProtKB:Q9NYB9-2|UniProtKB:Q9Y5B89068941 PMID:32296183IntActPMID:32296183

PMID:30032202  



DNAI7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11124,871,767 - 24,953,586 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1124,875,416 - 24,953,375 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
DNAI7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381225,107,047 - 25,195,160 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1225,108,289 - 25,195,162 (-)EnsemblGRCh38hg38GRCh38
GRCh371225,261,223 - 25,348,094 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,152,490 - 25,239,361 (-)NCBINCBI36Build 36hg18NCBI36
Build 341225,152,489 - 25,239,361NCBI
Celera1230,408,204 - 30,495,049 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1225,031,916 - 25,118,815 (-)NCBIHuRef
CHM1_11225,226,353 - 25,313,239 (-)NCBICHM1_1
T2T-CHM13v2.01224,977,958 - 25,066,403 (-)NCBIT2T-CHM13v2.0
Dnai7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396145,120,556 - 145,156,866 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6145,120,560 - 145,156,731 (-)EnsemblGRCm39 Ensembl
GRCm386145,174,833 - 145,211,017 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6145,174,834 - 145,211,005 (-)EnsemblGRCm38mm10GRCm38
MGSCv376145,123,392 - 145,159,490 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366145,132,084 - 145,168,060 (-)NCBIMGSCv36mm8
Celera6148,249,078 - 148,285,257 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.37NCBI
Dnai7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84179,874,338 - 179,910,716 (-)NCBIGRCr8
mRatBN7.24178,143,499 - 178,179,871 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4178,143,500 - 178,179,980 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4184,444,178 - 184,480,647 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04180,228,678 - 180,265,147 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04178,849,095 - 178,885,568 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04179,440,984 - 179,476,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4179,440,953 - 179,477,070 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04243,622,214 - 243,658,236 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44182,823,026 - 182,859,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14183,068,145 - 183,104,849 (-)NCBI
Celera4166,662,914 - 166,699,171 (-)NCBICelera
Cytogenetic Map4q44NCBI
Dnai7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541320,227,903 - 20,287,131 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541320,227,807 - 20,287,211 (-)NCBIChiLan1.0ChiLan1.0
DNAI7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21071,620,868 - 71,707,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11271,617,264 - 71,704,233 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01261,117,886 - 61,204,888 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11263,733,801 - 63,819,991 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1263,733,785 - 63,819,991 (+)Ensemblpanpan1.1panPan2
DNAI7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12722,309,705 - 22,369,052 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2722,303,849 - 22,369,051 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2723,999,487 - 24,071,297 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02722,502,481 - 22,568,288 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2722,502,580 - 22,568,282 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12722,317,692 - 22,384,301 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02722,336,520 - 22,403,282 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02724,171,481 - 24,238,226 (-)NCBIUU_Cfam_GSD_1.0
Dnai7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494584,200,357 - 84,274,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365482,123,360 - 2,202,032 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365482,123,248 - 2,197,245 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAI7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl548,555,688 - 48,651,365 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1548,555,637 - 48,651,370 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Dnai7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475213,855,426 - 13,936,764 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475213,855,328 - 13,932,210 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in DNAI7
2121 total Variants



ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20


1 to 23 of 23 rows
RefSeq Transcripts XM_007967939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007967951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037990251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073020565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JBLKOC010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 23 of 23 rows

Ensembl Acc Id: ENSCSAT00000005841   ⟹   ENSCSAP00000004057
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1124,875,416 - 24,953,375 (-)Ensembl
RefSeq Acc Id: XM_007967940   ⟹   XP_007966131
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11124,871,767 - 24,953,586 (-)NCBI
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007967942   ⟹   XP_007966133
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11124,871,767 - 24,953,586 (-)NCBI
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007967949   ⟹   XP_007966140
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11124,872,023 - 24,925,168 (-)NCBI
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037990250   ⟹   XP_037846178
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBI
RefSeq Acc Id: XM_037990251   ⟹   XP_037846179
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBI
RefSeq Acc Id: XP_007966133   ⟸   XM_007967942
- Peptide Label: isoform X2
RefSeq Acc Id: XP_007966131   ⟸   XM_007967940
- Peptide Label: isoform X1
RefSeq Acc Id: XP_007966140   ⟸   XM_007967949
- Peptide Label: isoform X5
Ensembl Acc Id: ENSCSAP00000004057   ⟸   ENSCSAT00000005841
RefSeq Acc Id: XP_037846179   ⟸   XM_037990251
- Peptide Label: isoform X4



1 to 10 of 10 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCSAG00000007796 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000005841.1 UniProtKB/TrEMBL
InterPro Casc1 UniProtKB/TrEMBL
  Casc1_N UniProtKB/TrEMBL
NCBI Gene CASC1 ENTREZGENE
PANTHER DYNEIN AXONEMAL INTERMEDIATE CHAIN 7 UniProtKB/TrEMBL
  PTHR20929 UniProtKB/TrEMBL
Pfam Casc1_N UniProtKB/TrEMBL
PRINTS CANCERSCCP1 UniProtKB/TrEMBL
UniProt A0A0D9R618_CHLSB UniProtKB/TrEMBL
1 to 10 of 10 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-02-16 DNAI7  dynein axonemal intermediate chain 7  CFAP94  cilia and flagella associated protein 94  Symbol and/or name change 5135510 APPROVED
2020-05-12 CFAP94  cilia and flagella associated protein 94  CASC1  cancer susceptibility 1  Symbol and/or name change 5135510 APPROVED