DNAI7 (dynein axonemal intermediate chain 7) - Rat Genome Database

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Gene: DNAI7 (dynein axonemal intermediate chain 7) Homo sapiens
Analyze
Symbol: DNAI7
Name: dynein axonemal intermediate chain 7
RGD ID: 1322554
HGNC Page HGNC:29599
Description: Predicted to enable beta-tubulin binding activity and microtubule binding activity. Predicted to be located in cilium and microtubule cytoskeleton. Predicted to be part of axonemal dynein complex. Predicted to be active in axoneme and cytoplasmic microtubule.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cancer susceptibility 1; cancer susceptibility candidate 1; cancer susceptibility candidate gene 1 protein; cancer susceptibility candidate protein 1; CASC1; CFAP94; cilia and flagella associated protein 94; dynein intermediate chain CFAP94, axonemal; FLJ10921; LAS1; lung adenoma susceptibility 1-like protein; PPP1R54; protein phosphatase 1, regulatory subunit 54
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381225,107,047 - 25,195,160 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1225,108,289 - 25,195,162 (-)EnsemblGRCh38hg38GRCh38
GRCh371225,261,223 - 25,348,094 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,152,490 - 25,239,361 (-)NCBINCBI36Build 36hg18NCBI36
Build 341225,152,489 - 25,239,361NCBI
Celera1230,408,204 - 30,495,049 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1225,031,916 - 25,118,815 (-)NCBIHuRef
CHM1_11225,226,353 - 25,313,239 (-)NCBICHM1_1
T2T-CHM13v2.01224,977,958 - 25,066,403 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Humanlung cancer amelioratesISODnai7 (Mus musculus)152998907DNA:missense mutation:CDS:p.N60S (mouse)RGD 
DNAI7HumanLung Neoplasms susceptibilityISODnai7 (Mus musculus)11340955 RGD 
DNAI7Humanlung non-small cell carcinoma amelioratesISODnai7 (Mus musculus)152998908 RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7HumanLung Neoplasms  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:15064703

1 to 20 of 46 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Human2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISODnai7 (Rattus norvegicus)64804642 more ...CTDPMID:27291303
DNAI7Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISODnai7 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of DNAI7 mRNACTDPMID:33387578
DNAI7Human6-propyl-2-thiouracil decreases expressionISODnai7 (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of CASC1 mRNA and Propylthiouracil results in decreased expression of DNAI7 mRNACTDPMID:24780913 and PMID:30047161
DNAI7Humanacetamide increases expressionISODnai7 (Rattus norvegicus)6480464acetamide results in increased expression of DNAI7 mRNACTDPMID:31881176
DNAI7Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of DNAI7 gene and Aflatoxin B1 results in decreased methylation of DNAI7 intronCTDPMID:27153756 and PMID:30157460
DNAI7Humanamitrole decreases expressionISODnai7 (Rattus norvegicus)6480464Amitrole results in decreased expression of CASC1 mRNACTDPMID:30047161
DNAI7Humanamphetamine increases expressionISODnai7 (Rattus norvegicus)6480464Amphetamine results in increased expression of DNAI7 mRNACTDPMID:30779732
DNAI7Humanbenzo[a]pyrene decreases expressionISODnai7 (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of DNAI7 mRNACTDPMID:22228805
DNAI7Humanbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of DNAI7 mRNACTDPMID:32234424
DNAI7Humanbenzo[e]pyrene increases methylationEXP 6480464benzo(e)pyrene results in increased methylation of DNAI7 intronCTDPMID:30157460
DNAI7Humanbisphenol A decreases expressionISODnai7 (Rattus norvegicus)6480464bisphenol A results in decreased expression of DNAI7 mRNACTDPMID:25181051 and PMID:34947998
DNAI7Humanbisphenol A multiple interactionsEXP 6480464[bisphenol A co-treated with Fulvestrant] results in increased methylation of DNAI7 geneCTDPMID:31601247
DNAI7Humanbisphenol A increases methylationEXP 6480464bisphenol A results in increased methylation of DNAI7 geneCTDPMID:31601247
DNAI7Humanbisphenol A decreases expressionISODnai7 (Mus musculus)6480464bisphenol A results in decreased expression of DNAI7 mRNACTDPMID:29161229
DNAI7Humanbisphenol A increases methylationISODnai7 (Rattus norvegicus)6480464bisphenol A results in increased methylation of DNAI7 geneCTDPMID:28505145
DNAI7Humanbutanal decreases expressionEXP 6480464butyraldehyde results in decreased expression of DNAI7 mRNACTDPMID:26079696
DNAI7Humancarbon nanotube decreases expressionISODnai7 (Mus musculus)6480464Nanotubes more ...CTDPMID:25554681
DNAI7Humanclothianidin decreases expressionEXP 6480464clothianidin results in decreased expression of DNAI7 mRNACTDPMID:31626844
DNAI7HumanCuprizon increases expressionISODnai7 (Rattus norvegicus)6480464Cuprizone results in increased expression of DNAI7 mRNACTDPMID:26577399
DNAI7Humandiethylstilbestrol decreases expressionEXP 6480464Diethylstilbestrol results in decreased expression of DNAI7 mRNACTDPMID:19371625

1 to 20 of 46 rows

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Humanaxonemal dynein complex part_ofISSUniProtKB:Q6TDU8150520179 UniProtGO_REF:0000024
DNAI7Humanaxoneme is_active_inIBAMGI:2444480 more ...150520179 GO_CentralGO_REF:0000033
DNAI7Humancell projection located_inIEAUniProtKB-KW:KW-0966150520179 UniProtGO_REF:0000043
DNAI7Humancilium located_inIEAUniProtKB-SubCell:SL-0066150520179 UniProtGO_REF:0000044
DNAI7Humancilium located_inISSUniProtKB:Q6TDU8150520179 UniProtGO_REF:0000024
DNAI7Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
DNAI7Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
DNAI7Humancytoplasmic microtubule is_active_inISODnai7 (Mus musculus)9068941 PMID:17974961MGIPMID:17974961
DNAI7Humancytoplasmic microtubule located_inISODnai7 (Mus musculus)9068941 PMID:17974961MGIPMID:17974961
DNAI7Humanmicrotubule cytoskeleton located_inISODnai7 (Mus musculus)9068941 PMID:17974961MGIPMID:17974961
1 to 10 of 10 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DNAI7Humanbeta-tubulin binding enablesISSUniProtKB:Q6TDU8150520179 UniProtGO_REF:0000024
DNAI7Humanbeta-tubulin binding enablesIBAMGI:2444480 and PANTHER:PTN000467967150520179 GO_CentralGO_REF:0000033
DNAI7Humanmicrotubule binding enablesISSUniProtKB:Q6TDU8150520179 UniProtGO_REF:0000024
DNAI7Humanmicrotubule binding enablesIBAMGI:2444480 and PANTHER:PTN000467967150520179 GO_CentralGO_REF:0000033
DNAI7Humanprotein binding enablesIPIUniProtKB:Q9NYB9-2 and UniProtKB:Q9Y5B8150520179 PMID:32296183IntActPMID:32296183


#
Reference Title
Reference Citation
1. Candidate lung tumor susceptibility genes identified through whole-genome association analyses in inbred mice. Liu P, etal., Nat Genet. 2006 Aug;38(8):888-95. Epub 2006 Jul 23.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Mechanisms promoting escape from mitotic stress-induced tumor cell death. Sinnott R, etal., Cancer Res. 2014 Jul 15;74(14):3857-69. doi: 10.1158/0008-5472.CAN-13-3398. Epub 2014 May 23.
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
6. Positional cloning of the major quantitative trait locus underlying lung tumor susceptibility in mice. Zhang Z, etal., Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12642-7. doi: 10.1073/pnas.2133947100.
PMID:8889548   PMID:14702039   PMID:16344560   PMID:16410263   PMID:18299280   PMID:19389623   PMID:20639392   PMID:20734064   PMID:21873635   PMID:22990118   PMID:28514442   PMID:30021884  
PMID:32296183   PMID:35914814   PMID:36774506  



DNAI7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381225,107,047 - 25,195,160 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1225,108,289 - 25,195,162 (-)EnsemblGRCh38hg38GRCh38
GRCh371225,261,223 - 25,348,094 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,152,490 - 25,239,361 (-)NCBINCBI36Build 36hg18NCBI36
Build 341225,152,489 - 25,239,361NCBI
Celera1230,408,204 - 30,495,049 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1225,031,916 - 25,118,815 (-)NCBIHuRef
CHM1_11225,226,353 - 25,313,239 (-)NCBICHM1_1
T2T-CHM13v2.01224,977,958 - 25,066,403 (-)NCBIT2T-CHM13v2.0
Dnai7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396145,120,556 - 145,156,866 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6145,120,560 - 145,156,731 (-)EnsemblGRCm39 Ensembl
GRCm386145,174,833 - 145,211,017 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6145,174,834 - 145,211,005 (-)EnsemblGRCm38mm10GRCm38
MGSCv376145,123,392 - 145,159,490 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366145,132,084 - 145,168,060 (-)NCBIMGSCv36mm8
Celera6148,249,078 - 148,285,257 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.37NCBI
Dnai7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84179,874,338 - 179,910,716 (-)NCBIGRCr8
mRatBN7.24178,143,499 - 178,179,871 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4178,143,500 - 178,179,980 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4184,444,178 - 184,480,647 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04180,228,678 - 180,265,147 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04178,849,095 - 178,885,568 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04179,440,984 - 179,476,965 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4179,440,953 - 179,477,070 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04243,622,214 - 243,658,236 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44182,823,026 - 182,859,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14183,068,145 - 183,104,849 (-)NCBI
Celera4166,662,914 - 166,699,171 (-)NCBICelera
Cytogenetic Map4q44NCBI
Dnai7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541320,227,903 - 20,287,131 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541320,227,807 - 20,287,211 (-)NCBIChiLan1.0ChiLan1.0
DNAI7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21071,620,868 - 71,707,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11271,617,264 - 71,704,233 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01261,117,886 - 61,204,888 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11263,733,801 - 63,819,991 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1263,733,785 - 63,819,991 (+)Ensemblpanpan1.1panPan2
DNAI7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12722,309,705 - 22,369,052 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2722,303,849 - 22,369,051 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2723,999,487 - 24,071,297 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02722,502,481 - 22,568,288 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2722,502,580 - 22,568,282 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12722,317,692 - 22,384,301 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02722,336,520 - 22,403,282 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02724,171,481 - 24,238,226 (-)NCBIUU_Cfam_GSD_1.0
Dnai7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494584,200,357 - 84,274,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365482,123,360 - 2,202,032 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365482,123,248 - 2,197,245 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAI7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl548,555,688 - 48,651,365 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1548,555,637 - 48,651,370 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DNAI7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11124,871,767 - 24,953,586 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1124,875,416 - 24,953,375 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606910,173,735 - 10,255,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnai7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475213,855,426 - 13,936,764 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475213,855,328 - 13,932,210 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in DNAI7
60 total Variants

1 to 10 of 77 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 1p31.1-13.3(chr1:72661709-107456880)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]|See cases [RCV000051825] Chr1:72661709..107456880 [GRCh38]
Chr1:73127392..107999502 [GRCh37]
Chr1:72899980..107801025 [NCBI36]
Chr1:1p31.1-13.3
pathogenic
NM_012093.3(AK5):c.1069+12565A>T single nucleotide variant Lung cancer [RCV000090988] Chr1:77498917 [GRCh38]
Chr1:77964602 [GRCh37]
Chr1:1p31.1
uncertain significance
GRCh38/hg38 1p32.1-22.3(chr1:58819605-86098611)x1 copy number loss See cases [RCV000136913] Chr1:58819605..86098611 [GRCh38]
Chr1:59285277..86564294 [GRCh37]
Chr1:59057865..86336882 [NCBI36]
Chr1:1p32.1-22.3
pathogenic
GRCh38/hg38 1p31.1-22.2(chr1:76419302-88628464)x1 copy number loss See cases [RCV000138957] Chr1:76419302..88628464 [GRCh38]
Chr1:76884987..89094147 [GRCh37]
Chr1:76657575..88866735 [NCBI36]
Chr1:1p31.1-22.2
pathogenic
GRCh38/hg38 1p31.1(chr1:77256993-77510214)x1 copy number loss See cases [RCV000142131] Chr1:77256993..77510214 [GRCh38]
Chr1:77722678..77975899 [GRCh37]
Chr1:77495266..77748487 [NCBI36]
Chr1:1p31.1
uncertain significance
GRCh38/hg38 1p31.1(chr1:77264562-77493002)x1 copy number loss See cases [RCV000143317] Chr1:77264562..77493002 [GRCh38]
Chr1:77730247..77958687 [GRCh37]
Chr1:77502835..77731275 [NCBI36]
Chr1:1p31.1
likely benign|uncertain significance
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 copy number loss not provided [RCV000762767] Chr1:20608823..120546301 [GRCh37]
Chr1:1p36.12-12
likely benign
GRCh37/hg19 1p31.1(chr1:77722678-77970795)x1 copy number loss See cases [RCV000448416] Chr1:77722678..77970795 [GRCh37]
Chr1:1p31.1
uncertain significance
NM_174858.3(AK5):c.609= (p.Lys203=) single nucleotide variant not provided [RCV004713972]|not specified [RCV000454614] Chr1:77297857 [GRCh38]
Chr1:77763542 [GRCh37]
Chr1:1p31.1
benign
NM_174858.3(AK5):c.1681_1683dup (p.Ile561dup) duplication not specified [RCV000454873] Chr1:77558660..77558661 [GRCh38]
Chr1:78024345..78024346 [GRCh37]
Chr1:1p31.1
benign
1 to 10 of 77 rows

Predicted Target Of
Summary Value
Count of predictions:1459
Count of miRNA genes:594
Interacting mature miRNAs:652
Transcripts:ENST00000320267, ENST00000354189, ENST00000395987, ENST00000395990, ENST00000537577, ENST00000545133, ENST00000554347, ENST00000554533, ENST00000555240, ENST00000555554, ENST00000556006, ENST00000556467, ENST00000556547, ENST00000557684
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

RH92803  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,261,476 - 25,261,595UniSTSGRCh37
Build 361225,152,743 - 25,152,862RGDNCBI36
Celera1230,408,457 - 30,408,576RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,032,169 - 25,032,288UniSTS
GeneMap99-GB4 RH Map1292.63UniSTS
SHGC-83826  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,265,038 - 25,265,314UniSTSGRCh37
Build 361225,156,305 - 25,156,581RGDNCBI36
Celera1230,412,040 - 30,412,316RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,035,752 - 25,036,028UniSTS
TNG Radiation Hybrid Map1211299.0UniSTS
SHGC-132095  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,261,069 - 25,261,169UniSTSGRCh37
Build 361225,152,336 - 25,152,436RGDNCBI36
Celera1230,408,050 - 30,408,150RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,031,762 - 25,031,862UniSTS
TNG Radiation Hybrid Map1211291.0UniSTS
LRMP_7815  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,260,821 - 25,261,289UniSTSGRCh37
Build 361225,152,088 - 25,152,556RGDNCBI36
Celera1230,407,802 - 30,408,270RGD
HuRef1225,031,514 - 25,031,982UniSTS
CASC1_9888  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,261,055 - 25,261,643UniSTSGRCh37
Build 361225,152,322 - 25,152,910RGDNCBI36
Celera1230,408,036 - 30,408,624RGD
HuRef1225,031,748 - 25,032,336UniSTS
D12S1350E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,260,995 - 25,261,169UniSTSGRCh37
Build 361225,152,262 - 25,152,436RGDNCBI36
Celera1230,407,976 - 30,408,150RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,031,688 - 25,031,862UniSTS
Stanford-G3 RH Map121228.0UniSTS
Whitehead-YAC Contig Map12 UniSTS
NCBI RH Map12278.3UniSTS
GeneMap99-G3 RH Map121228.0UniSTS
RH17991  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,260,768 - 25,261,005UniSTSGRCh37
Build 361225,152,035 - 25,152,272RGDNCBI36
Celera1230,407,749 - 30,407,986RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,031,461 - 25,031,698UniSTS
GeneMap99-GB4 RH Map1292.63UniSTS
STS-AA005176  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,297,363 - 25,297,582UniSTSGRCh37
Build 361225,188,630 - 25,188,849RGDNCBI36
Celera1230,444,336 - 30,444,555RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,068,098 - 25,068,317UniSTS
GeneMap99-GB4 RH Map1293.32UniSTS
RH45039  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371225,261,081 - 25,261,200UniSTSGRCh37
Build 361225,152,348 - 25,152,467RGDNCBI36
Celera1230,408,062 - 30,408,181RGD
Cytogenetic Map12p12.1UniSTS
HuRef1225,031,774 - 25,031,893UniSTS
GeneMap99-GB4 RH Map1292.63UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1183 2385 2706 2209 4947 1640 2257 6 538 1790 380 2240 6893 6239 52 3731 843 1735 1608 172 1


1 to 30 of 64 rows
RefSeq Transcripts NM_001082972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001082973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001319977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001319978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_147909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_147910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_147911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 64 rows

Ensembl Acc Id: ENST00000320267   ⟹   ENSP00000313141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,420 - 25,195,160 (-)Ensembl
Ensembl Acc Id: ENST00000354189   ⟹   ENSP00000346126
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,420 - 25,195,098 (-)Ensembl
Ensembl Acc Id: ENST00000395987   ⟹   ENSP00000379310
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,289 - 25,195,160 (-)Ensembl
Ensembl Acc Id: ENST00000395990   ⟹   ENSP00000379313
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,420 - 25,195,160 (-)Ensembl
Ensembl Acc Id: ENST00000545133   ⟹   ENSP00000437373
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,424 - 25,195,126 (-)Ensembl
Ensembl Acc Id: ENST00000554347   ⟹   ENSP00000451232
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,154,341 - 25,195,130 (-)Ensembl
Ensembl Acc Id: ENST00000554533   ⟹   ENSP00000450703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,421 - 25,195,162 (-)Ensembl
Ensembl Acc Id: ENST00000555240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,154,375 - 25,195,127 (-)Ensembl
Ensembl Acc Id: ENST00000555554
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,111,817 - 25,149,692 (-)Ensembl
Ensembl Acc Id: ENST00000556006   ⟹   ENSP00000451813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,420 - 25,158,563 (-)Ensembl
Ensembl Acc Id: ENST00000556467   ⟹   ENSP00000451011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,149,762 - 25,195,160 (-)Ensembl
Ensembl Acc Id: ENST00000556547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,149,628 - 25,195,157 (-)Ensembl
Ensembl Acc Id: ENST00000557684
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,111,772 - 25,195,126 (-)Ensembl
Ensembl Acc Id: ENST00000674567   ⟹   ENSP00000502075
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,436 - 25,195,144 (-)Ensembl
Ensembl Acc Id: ENST00000676236   ⟹   ENSP00000501714
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1225,108,477 - 25,195,108 (-)Ensembl
RefSeq Acc Id: NM_001082972   ⟹   NP_001076441
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
Build 361225,152,490 - 25,239,361 (-)NCBI Archive
Celera1230,408,204 - 30,495,049 (-)RGD
HuRef1225,031,916 - 25,118,815 (-)RGD
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001082973   ⟹   NP_001076442
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
Build 361225,152,490 - 25,239,361 (-)NCBI Archive
Celera1230,408,204 - 30,495,049 (-)RGD
HuRef1225,031,916 - 25,118,815 (-)RGD
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001204101   ⟹   NP_001191030
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
HuRef1225,031,916 - 25,118,815 (-)RGD
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001204102   ⟹   NP_001191031
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
HuRef1225,031,916 - 25,118,815 (-)RGD
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001319977   ⟹   NP_001306906
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001319978   ⟹   NP_001306907
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352061   ⟹   NP_001338990
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352062   ⟹   NP_001338991
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352063   ⟹   NP_001338992
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352064   ⟹   NP_001338993
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352065   ⟹   NP_001338994
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352066   ⟹   NP_001338995
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352067   ⟹   NP_001338996
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352068   ⟹   NP_001338997
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018272   ⟹   NP_060742
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
Build 361225,152,490 - 25,239,361 (-)NCBI Archive
Celera1230,408,204 - 30,495,049 (-)RGD
HuRef1225,031,916 - 25,118,815 (-)RGD
CHM1_11225,226,353 - 25,313,241 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NR_147909
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NR_147910
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: NR_147911
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005253406   ⟹   XP_005253463
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
GRCh371225,261,223 - 25,348,096 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719101   ⟹   XP_006719164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520723   ⟹   XP_011519025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,107,047 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520726   ⟹   XP_011519028
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,114,655 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520727   ⟹   XP_011519029
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,114,787 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019560   ⟹   XP_016875049
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019565   ⟹   XP_016875054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429074   ⟹   XP_047285030
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
RefSeq Acc Id: XM_047429075   ⟹   XP_047285031
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
RefSeq Acc Id: XM_047429076   ⟹   XP_047285032
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,114,655 - 25,195,160 (-)NCBI
RefSeq Acc Id: XM_047429077   ⟹   XP_047285033
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,108,289 - 25,195,160 (-)NCBI
RefSeq Acc Id: XM_047429078   ⟹   XP_047285034
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,114,655 - 25,195,160 (-)NCBI
RefSeq Acc Id: XM_054372411   ⟹   XP_054228386
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372412   ⟹   XP_054228387
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,977,958 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372413   ⟹   XP_054228388
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372414   ⟹   XP_054228389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372415   ⟹   XP_054228390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372416   ⟹   XP_054228391
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372417   ⟹   XP_054228392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372418   ⟹   XP_054228393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,985,588 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372419   ⟹   XP_054228394
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,985,720 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372420   ⟹   XP_054228395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,985,588 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372421   ⟹   XP_054228396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,979,200 - 25,066,403 (-)NCBI
RefSeq Acc Id: XM_054372422   ⟹   XP_054228397
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01224,985,588 - 25,066,403 (-)NCBI
1 to 30 of 67 rows
Protein RefSeqs NP_001076441 (Get FASTA)   NCBI Sequence Viewer  
  NP_001076442 (Get FASTA)   NCBI Sequence Viewer  
  NP_001191030 (Get FASTA)   NCBI Sequence Viewer  
  NP_001191031 (Get FASTA)   NCBI Sequence Viewer  
  NP_001306906 (Get FASTA)   NCBI Sequence Viewer  
  NP_001306907 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338990 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338991 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338992 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338993 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338994 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338995 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338996 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338997 (Get FASTA)   NCBI Sequence Viewer  
  NP_060742 (Get FASTA)   NCBI Sequence Viewer  
  XP_005253463 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719164 (Get FASTA)   NCBI Sequence Viewer  
  XP_011519025 (Get FASTA)   NCBI Sequence Viewer  
  XP_011519028 (Get FASTA)   NCBI Sequence Viewer  
  XP_011519029 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875049 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875054 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285030 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285031 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285032 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285033 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285034 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228386 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228387 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228388 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 67 rows
1 to 5 of 50 rows
1 to 5 of 50 rows
RefSeq Acc Id: NP_060742   ⟸   NM_018272
- Peptide Label: isoform a
- UniProtKB: F8W8F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001076442   ⟸   NM_001082973
- Peptide Label: isoform b
- UniProtKB: Q6TDU7 (UniProtKB/Swiss-Prot),   Q5U5K5 (UniProtKB/Swiss-Prot),   Q4G171 (UniProtKB/Swiss-Prot),   Q17RL2 (UniProtKB/Swiss-Prot),   F5H6T6 (UniProtKB/Swiss-Prot),   B4DNP2 (UniProtKB/Swiss-Prot),   Q9NV50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001076441   ⟸   NM_001082972
- Peptide Label: isoform c
- UniProtKB: Q6TDU7 (UniProtKB/Swiss-Prot),   B4E376 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001191030   ⟸   NM_001204101
- Peptide Label: isoform e
- UniProtKB: A0A6Q8PG26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001191031   ⟸   NM_001204102
- Peptide Label: isoform d
- UniProtKB: A0A6Q8PG26 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-Q6TDU7-F1-model_v2 AlphaFold Q6TDU7 1-716 view protein structure

RGD ID:7223453
Promoter ID:EPDNEW_H17473
Type:initiation region
Name:CASC1_1
Description:cancer susceptibility 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381225,195,160 - 25,195,220EPDNEW
RGD ID:6789929
Promoter ID:HG_KWN:15217
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000395992,   NM_001001660,   NM_001082972,   NM_001082973,   NM_018272,   UC001RGJ.1,   UC001RGO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361225,239,249 - 25,239,749 (-)MPROMDB


1 to 40 of 53 rows
Database
Acc Id
Source(s)
COSMIC DNAI7 COSMIC
Ensembl Genes ENSG00000118307 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000320267 ENTREZGENE
  ENST00000320267.13 UniProtKB/Swiss-Prot
  ENST00000354189 ENTREZGENE
  ENST00000354189.9 UniProtKB/Swiss-Prot
  ENST00000395987 ENTREZGENE
  ENST00000395990 ENTREZGENE
  ENST00000395990.6 UniProtKB/Swiss-Prot
  ENST00000545133 ENTREZGENE
  ENST00000545133.5 UniProtKB/Swiss-Prot
  ENST00000554533 ENTREZGENE
  ENST00000557684 ENTREZGENE
  ENST00000674567 ENTREZGENE
  ENST00000676236 ENTREZGENE
GTEx ENSG00000118307 GTEx
HGNC ID HGNC:29599 ENTREZGENE
Human Proteome Map DNAI7 Human Proteome Map
InterPro Casc1 UniProtKB/Swiss-Prot
  CASC1_C UniProtKB/Swiss-Prot
  Casc1_N UniProtKB/Swiss-Prot
KEGG Report hsa:55259 UniProtKB/Swiss-Prot
NCBI Gene 55259 ENTREZGENE
OMIM 616906 OMIM
PANTHER DYNEIN AXONEMAL INTERMEDIATE CHAIN 7 UniProtKB/Swiss-Prot
  PTHR20929 UniProtKB/Swiss-Prot
Pfam Casc1_C UniProtKB/Swiss-Prot
  Casc1_N UniProtKB/Swiss-Prot
PharmGKB PA166352473 PharmGKB
PRINTS CANCERSCCP1 UniProtKB/Swiss-Prot
UniProt A0A6Q8PG26 ENTREZGENE, UniProtKB/TrEMBL
  B3KS92 ENTREZGENE, UniProtKB/TrEMBL
  B4DNP2 ENTREZGENE
  B4DY27 ENTREZGENE, UniProtKB/TrEMBL
  B4E376 ENTREZGENE, UniProtKB/TrEMBL
  CASC1_HUMAN UniProtKB/Swiss-Prot
  F5H6T6 ENTREZGENE
  F8W8F9 ENTREZGENE, UniProtKB/TrEMBL
  G3V2J3_HUMAN UniProtKB/TrEMBL
  G3V333_HUMAN UniProtKB/TrEMBL
1 to 40 of 53 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-02-15 DNAI7  dynein axonemal intermediate chain 7  CFAP94  cilia and flagella associated protein 94  Symbol and/or name change 19259463 PROVISIONAL
2020-05-11 CFAP94  cilia and flagella associated protein 94  CASC1  cancer susceptibility 1  Symbol and/or name change 19259463 PROVISIONAL
2017-01-31 CASC1  cancer susceptibility 1    cancer susceptibility candidate 1  Symbol and/or name change 5135510 APPROVED