Rafaril_m QTL Report (Mus musculus) - Rat Genome Database

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QTL: Rafaril_m (Rafar interacting locus (mouse)) Mus musculus

Symbol: Rafaril_m
Name: Rafar interacting locus (mouse)
RGD ID: 4142127
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39181 - 23,108,555MOUSEQTLGRCm39
GRCm38181 - 23,108,555MOUSEQTLGRCm38
MGSCv37181 - 23,108,553 (+)MOUSEQTLGRCm37
cM Map184.46MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:15781699  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
401708819LOC131389997STARR-seq mESC enhancer starr_436471830052983005951Mouse
4860065Vmn1r-ps151vomeronasal 1 receptor, pseudogene 1511830269013027802Mouse
401713320LOC131389998STARR-seq mESC enhancer starr_436481830306373031926Mouse
401705648LOC131389999STARR-seq mESC enhancer starr_436491830393823041858Mouse
401715476LOC131390000STARR-seq mESC enhancer starr_436501830457393048252Mouse
3739929Vmn1r-ps152vomeronasal 1 receptor, pseudogene 1521830807783081476Mouse
401702596LOC131390001STARR-seq mESC enhancer starr_436521831023083103547Mouse
4804708Vmn1r238vomeronasal 1 receptor, 2381831224923123412Mouse
401713585LOC131390002STARR-seq mESC enhancer starr_436531831308953131799Mouse
401715309LOC131390003STARR-seq mESC enhancer starr_436541831780753179520Mouse
401703362LOC131390004STARR-seq mESC enhancer starr_436551832115253214244Mouse
735942CremcAMP responsive element modulator1832631813337688Mouse
401841990LOC132444758STARR-positive B cell enhancer ABC_E56461832806553280956Mouse
1623511Gm6225predicted gene 62251833364163366863Mouse
1321671Cul2cullin 21833829703436700Mouse
1622598Gm6235predicted gene 62351834466543447503Mouse
401700774LOC131390005STARR-seq mESC enhancer starr_436581834476523450373Mouse
401712534LOC131390006STARR-seq mESC enhancer starr_436601834896993491622Mouse
736709BambiBMP and activin membrane-bound inhibitor1835070113516404Mouse
401835786LOC132444759STARR-positive B cell enhancer ABC_E109801835076303507930Mouse
401705124LOC131390007STARR-seq mESC enhancer starr_436611835929373594508Mouse
401702163LOC131390008STARR-seq mESC enhancer starr_436621836803773681376Mouse
401714843LOC131390009STARR-seq mESC enhancer starr_436631837351043737921Mouse
401702004LOC131390010STARR-seq mESC enhancer starr_436641837643793765506Mouse
39130236Gm54028predicted gene, 540281838274773829343Mouse
401701720LOC131390011STARR-seq mESC enhancer starr_436661838468623848514Mouse
401716013LOC131390012STARR-seq mESC enhancer starr_436671838569253858342Mouse
2310075Rpl7a-ps6ribosomal protein L7A, pseudogene 61838577303858585Mouse
401709216LOC131390013STARR-seq mESC enhancer starr_436681838979233899134Mouse
163682987LOC128927764CapStarr-seq enhancer MGSCv37_chr18:3933865-39340181839338673934020Mouse
1619440Gm7378predicted gene 73781840101434011335Mouse
401704199LOC131390014STARR-seq mESC enhancer starr_436701840173964020072Mouse
2295999Gm6248predicted gene 62481840523604052771Mouse
401715489LOC131390015STARR-seq mESC enhancer starr_436711840967264098810Mouse
401702627LOC131390016STARR-seq mESC enhancer starr_436721841265124128096Mouse
1557184Lyzl1lysozyme-like 11841658624182232Mouse
2307851Gm10557predicted gene 105571841983404199135Mouse
10021675Gm41657predicted gene, 416571842441214250779Mouse
401701069LOC131390017STARR-seq mESC enhancer starr_436731842485974250188Mouse
401713713LOC131390018STARR-seq mESC enhancer starr_436741842813744282602Mouse
2310955Gm7400predicted gene 74001842930974294538Mouse
401837519LOC132444760STARR-positive B cell enhancer ABC_E75691842950914295392Mouse
163675468LOC128927765CapStarr-seq enhancer MGSCv37_chr18:4295908-42960951842959104296097Mouse
401703243LOC131390019STARR-seq mESC enhancer starr_436751843200774321729Mouse
731489Map3k8mitogen-activated protein kinase kinase kinase 81843313254352978Mouse
16080544833419F23RikRIKEN cDNA 4833419F23 gene1843535474368945Mouse
163667509LOC128927766CapStarr-seq enhancer MGSCv37_chr18:4375540-43757271843755424375729Mouse
1322071Mtpapmitochondrial poly(A) polymerase1843755734399888Mouse
401715932LOC131390020STARR-seq mESC enhancer starr_436771844033784405041Mouse
401711669LOC131390021STARR-seq mESC enhancer starr_436791844264144429113Mouse
15018649Gm52359predicted gene, 523591844430864477580Mouse
1618581Gm7411predicted gene 74111844845064485501Mouse
401706901LOC131390022STARR-seq mESC enhancer starr_436801845376074540329Mouse
10028962Gm41658predicted gene, 416581845416124562599Mouse
401705972LOC131390023STARR-seq mESC enhancer starr_436811845810124582510Mouse
1312319Jcadjunctional cadherin 5 associated1845907754682869Mouse
401715770LOC131390024STARR-seq mESC enhancer starr_436821847358684738203Mouse
2295925Gm5047predicted gene 50471847430664743876Mouse
401715581LOC131390025STARR-seq mESC enhancer starr_436831847611984762889Mouse
401836922LOC132444761STARR-positive B cell enhancer ABC_E75701847854414785742Mouse
401711673LOC131390026STARR-seq mESC enhancer starr_436841848031454804362Mouse
1624765Gm10556predicted gene 105561848124864850959Mouse
9663533Gm34269predicted gene, 342691848203034826659Mouse
10010541Gm41659predicted gene, 416591848697774912271Mouse
1314925Svilsupervillin1849204975119290Mouse
401715859LOC131390027STARR-seq mESC enhancer starr_436861850108215013362Mouse
401710799LOC131390028STARR-seq mESC enhancer starr_436891850166335018744Mouse
9644295Gm34326predicted gene, 343261850428185048886Mouse
401704933LOC131390029STARR-seq mESC enhancer starr_436911851143605116265Mouse
401701567LOC131390030STARR-seq mESC enhancer starr_436921851362185137693Mouse
39128600Gm53196predicted gene, 531961851365745142799Mouse
163650607LOC128927767STARR-seq mESC enhancer starr_436931851621105164771Mouse
9626875Gm26682predicted gene, 266821851628395165731Mouse
401709070LOC131390031STARR-seq mESC enhancer starr_436941852019675204452Mouse
1332488Zfp438zinc finger protein 4381852100275334826Mouse
401835695LOC132444762STARR-positive B cell enhancer mm9_chr18:5334784-53350851853347865335087Mouse
163682026LOC128927768CapStarr-seq enhancer MGSCv37_chr18:5347140-53473231853471425347325Mouse
15019050Gm52372predicted gene, 523721853490145349149Mouse
9663571Gm34630predicted gene, 346301853898295402870Mouse
163645735LOC128927769STARR-seq mESC enhancer starr_436951854225485426399Mouse
1616093Zeb1os1zinc finger E-box binding homeobox 1, opposite strand 11854915015592437Mouse
401715063LOC131390032STARR-seq mESC enhancer starr_436971855222585523508Mouse
15022281Gm52340predicted gene, 523401855705485575055Mouse
401833335Gm2238predicted gene 22381855881215591729Mouse
163692936LOC128927770CapStarr-seq enhancer MGSCv37_chr18:5591157-55913401855911595591342Mouse
1552190Zeb1zinc finger E-box binding homeobox 11855913305775468Mouse
401840988LOC132444763STARR-positive B cell enhancer mm9_chr18:5591593-55918931855915955591895Mouse
401714024LOC131390033STARR-seq mESC enhancer starr_436991858743885876158Mouse
9631303Gm34740predicted gene, 347401858856415889876Mouse
9632105Gm34804predicted gene, 348041859567465966908Mouse
401832166LOC132444764STARR-positive B cell enhancer mm9_chr18:5989955-59902551859899575990257Mouse
10014811Gm41663predicted gene, 416631860045736014262Mouse
10013162Gm41662predicted gene, 416621860142536018865Mouse
1320677Arhgap12Rho GTPase activating protein 121860244486136102Mouse
5142307Gm19240predicted gene, 192401860289796030439Mouse
401712643LOC131390034STARR-seq mESC enhancer starr_437011860937576094669Mouse
5143281Gm18278predicted gene, 182781860954886096017Mouse
401841932LOC132444765STARR-positive B cell enhancer ABC_E15141861359366136237Mouse
401717356LOC131390035STARR-seq mESC enhancer starr_437021861736856175718Mouse
1552703Kif5bkinesin family member 5B1862010056241524Mouse
401702217LOC131390036STARR-seq mESC enhancer starr_437031862310286232895Mouse
10019696Gm41664predicted gene, 416641862348636326693Mouse
401701390LOC131390037STARR-seq mESC enhancer starr_437041862694106270715Mouse
401714059LOC131390038STARR-seq mESC enhancer starr_437051862750116276269Mouse
401710417LOC131390039STARR-seq mESC enhancer starr_437061862805616282276Mouse
401713287LOC131390040STARR-seq mESC enhancer starr_437091862914136292435Mouse
401715413LOC131390041STARR-seq mESC enhancer starr_437111863186416321780Mouse
401717059LOC131390042STARR-seq mESC enhancer starr_437121863238906326394Mouse
1615427Rpl27-ps3ribosomal protein L27, pseudogene 31863325916333082Mouse
401706795LOC131390043STARR-seq mESC enhancer starr_437131863712176372868Mouse
1617856Gm6291predicted gene 62911863713976371660Mouse
401707747LOC131390044STARR-seq mESC enhancer starr_437141863867696392704Mouse
401703104LOC131390045STARR-seq mESC enhancer starr_437151863937916395507Mouse
401707333LOC131390046STARR-seq mESC enhancer starr_437161864088396410822Mouse
1314408Epc1enhancer of polycomb homolog 11864359516516108Mouse
401709833LOC131390047STARR-seq mESC enhancer starr_437171864893706491270Mouse
4804470Mir1893microRNA 18931864905646490646Mouse
2295818Gm7464predicted gene 74641865570346557996Mouse
401716016LOC131390048STARR-seq mESC enhancer starr_437191865668796569192Mouse
16183354921524L21RikRIKEN cDNA 4921524L21 gene1866036296638970Mouse
401714951LOC131390049STARR-seq mESC enhancer starr_437211866789266680388Mouse
401705057LOC131390050STARR-seq mESC enhancer starr_437221866810386682549Mouse
401705177LOC131390051STARR-seq mESC enhancer starr_437231867570376758642Mouse
1617775Gm7466predicted gene 74661867600736760959Mouse
401836485LOC132444766STARR-positive B cell enhancer ABC_E56471867648196765120Mouse
1318942Rab18RAB18, member RAS oncogene family1867651676791606Mouse
401701398LOC131390052STARR-seq mESC enhancer starr_437251867733686774919Mouse
1313807Mkxmohawk homeobox1869349667004779Mouse
12794037Gm46633predicted gene, 466331870061387066322Mouse
2293947Gm10350predicted gene 103501870419397044195Mouse
401703340LOC131390053STARR-seq mESC enhancer starr_437311870735987074369Mouse
1315829Odad2outer dynein arm docking complex subunit 21870882337298272Mouse
5142982Gm18581predicted gene, 185811871071777108279Mouse
401705711LOC131390054STARR-seq mESC enhancer starr_437321873265167327415Mouse
9607174Gm34979predicted gene, 349791873324457346738Mouse
1313844Mpp7membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)1873479627627017Mouse
401701350LOC131390055STARR-seq mESC enhancer starr_437331874161687419332Mouse
401715192LOC131390056STARR-seq mESC enhancer starr_437341874328607434555Mouse
401835849LOC132444767STARR-positive B cell enhancer mm9_chr18:7497579-74978791874975817497881Mouse
401701945LOC131390057STARR-seq mESC enhancer starr_437351875195267521080Mouse
5142603Gm18948predicted gene, 189481875489327549781Mouse
1616299Fabp5l2fatty acid binding protein 5-like 21875814827582130Mouse
401711179LOC131390058STARR-seq mESC enhancer starr_437361875822647584697Mouse
401832220LOC132444768STARR-positive B cell enhancer mm9_chr18:7609231-76095321876092337609534Mouse
401836772LOC132444769STARR-positive B cell enhancer ABC_E42381876267887627089Mouse
401711584LOC131390059STARR-seq mESC enhancer starr_437401876492837653479Mouse
401708278LOC131390060STARR-seq mESC enhancer starr_437411876719207673111Mouse
401706179LOC131390061STARR-seq mESC enhancer starr_437421876817887683137Mouse
5142800Gm18763predicted gene, 187631876840767693411Mouse
401714862LOC131390062STARR-seq mESC enhancer starr_437431876861117688127Mouse
401707901LOC131390063STARR-seq mESC enhancer starr_437451877191537722222Mouse
2310644Gm2336predicted gene 23361877987847799900Mouse
14999041Gm24292predicted gene, 242921878351777835283Mouse
401716388LOC131390064STARR-seq mESC enhancer starr_437471878630007864443Mouse
1616893Gm9993predicted gene 99931878676257869095Mouse
1558548WacWW domain containing adaptor with coiled-coil1878686147929028Mouse
401838680LOC132444770STARR-positive B cell enhancer ABC_E75721878689677869268Mouse
2295747Gm7502predicted gene 75021879327287933556Mouse
401713482LOC131390065STARR-seq mESC enhancer starr_437481879640337966708Mouse
401710348LOC131390066STARR-seq mESC enhancer starr_437491880071108008277Mouse
2294313Gm4833predicted gene 48331880511808052093Mouse
401705850LOC131390067STARR-seq mESC enhancer starr_437501880725428073357Mouse
15020456Gm51428predicted gene, 514281880822538082358Mouse
401702830LOC131390068STARR-seq mESC enhancer starr_437511880986338100329Mouse
401705112LOC131390069STARR-seq mESC enhancer starr_437521881361748137284Mouse
401710934LOC131390070STARR-seq mESC enhancer starr_437531881762988177327Mouse
9635016Gm35031predicted gene, 350311881805798192719Mouse
401703566LOC131390071STARR-seq mESC enhancer starr_437541881934578195039Mouse
5138120Gm20147predicted gene, 201471882273438228021Mouse
401713597LOC131390072STARR-seq mESC enhancer starr_437561883570348358566Mouse
1621895Gm5500predicted pseudogene 55001884150208417612Mouse
401704878LOC131390073STARR-seq mESC enhancer starr_437581884662038467481Mouse
401700452LOC131390074STARR-seq mESC enhancer starr_437591884777918479021Mouse
401703934LOC131390075STARR-seq mESC enhancer starr_437601885236018524766Mouse
401710954LOC131390076STARR-seq mESC enhancer starr_437621886146098616306Mouse
9661488Gm35180predicted gene, 351801886739218718016Mouse
9608717Gm35232predicted gene, 352321886790518679298Mouse
1619590Gm5819predicted gene 58191886939588697114Mouse
401705615LOC131390077STARR-seq mESC enhancer starr_437631887927278794212Mouse
401701084LOC131390078STARR-seq mESC enhancer starr_437651888595688861051Mouse
2310760Gm7523predicted gene 75231889677318969032Mouse
401705195LOC131390079STARR-seq mESC enhancer starr_437671890006779002057Mouse
5143033Gm18526predicted gene, 185261890997089100255Mouse
401702889LOC131390080STARR-seq mESC enhancer starr_437681891080809111451Mouse
401714766LOC131390081STARR-seq mESC enhancer starr_437691891564929157520Mouse
401708712LOC131390082STARR-seq mESC enhancer starr_437701891965589198405Mouse
1558526Fzd8frizzled class receptor 81892128569216201Mouse
39130125LOC114827939VISTA enhancer mm16321892156739216934Mouse
1550043Gjd4gap junction protein, delta 41892781249289808Mouse
401703995LOC131390083STARR-seq mESC enhancer starr_437721892786049280075Mouse
401711936LOC131390084STARR-seq mESC enhancer starr_437731892974369299028Mouse
401700998LOC131390085STARR-seq mESC enhancer starr_437741892997819301004Mouse
1557522Ccnycyclin Y1893123049450188Mouse
401832215LOC132444771STARR-positive B cell enhancer ABC_E75731894501279450428Mouse
401712645LOC131390086STARR-seq mESC enhancer starr_437761894557179457152Mouse
9665637Gm35458predicted gene, 354581894650509471153Mouse
2295738Gm7527predicted gene 75271894956219496509Mouse
401705092LOC131390087STARR-seq mESC enhancer starr_437771895310729534122Mouse
2310756Gm7532predicted gene 75321895382589539766Mouse
1623444Gm7274predicted gene 72741895435929546376Mouse
401703992LOC131390088STARR-seq mESC enhancer starr_437791895867939589337Mouse
401711663LOC131390089STARR-seq mESC enhancer starr_437801895910599592199Mouse
12798104Gm46616predicted gene, 466161895910609591433Mouse
1552948Cetn1centrin 11896184199619469Mouse
2309350Gm4834predicted gene 48341896288549632527Mouse
401712004LOC131390090STARR-seq mESC enhancer starr_437811896493149651316Mouse
1553600Colec12collectin sub-family member 121897076489877995Mouse
39128502LOC11856836860S ribosomal protein L24-like1897261179726734Mouse
401710015LOC131390091STARR-seq mESC enhancer starr_437821897298929730937Mouse
2295749Gm7497predicted gene 74971897487049749925Mouse
14996058Gm23350predicted gene, 233501897631609763262Mouse
401713515LOC131390092STARR-seq mESC enhancer starr_437831898947669897149Mouse
401712788LOC131390093STARR-seq mESC enhancer starr_437841898992679901052Mouse
2310543Gm2424predicted gene 24241899091969910499Mouse
1621894Gm5501predicted gene 55011899169259917758Mouse
401715630LOC131390094STARR-seq mESC enhancer starr_437851899288009929936Mouse
401702342LOC131390095STARR-seq mESC enhancer starr_437861899463439949391Mouse
1318556Thoc1THO complex 11899581769995486Mouse
1323484Usp14ubiquitin specific peptidase 1418999361510030149Mouse
401714288LOC131390096STARR-seq mESC enhancer starr_43787181004081710042524Mouse
401713754LOC131390097STARR-seq mESC enhancer starr_43788181004404610045952Mouse
401703314LOC131390098STARR-seq mESC enhancer starr_43789181004887910051759Mouse
733752Rock1Rho-associated coiled-coil containing protein kinase 1181006440110182225Mouse
2299693Gm2531predicted gene 2531181014545110146007Mouse
15003109Gm26244predicted gene, 26244181015097710151140Mouse
2309521Gm7156predicted gene 7156181019742410198248Mouse
401702850LOC131390099STARR-seq mESC enhancer starr_43790181020778110210186Mouse
5142500Gm19052predicted gene, 19052181023668510237821Mouse
2295045Gm5686predicted gene 5686181026220210263803Mouse
401704216LOC131390100STARR-seq mESC enhancer starr_43791181026879210271336Mouse
401701831LOC131390101STARR-seq mESC enhancer starr_43793181028933410291376Mouse
1621948Greb1lgrowth regulation by estrogen in breast cancer-like181032493310562945Mouse
2295842Nutf2-ps2nuclear transport factor 2, pseudogene 2181048265710483545Mouse
401710881LOC131390102STARR-seq mESC enhancer starr_43798181051790310519522Mouse
163688073LOC128927771CapStarr-seq enhancer MGSCv37_chr18:10532920-10533103181053292210533105Mouse
1615016Esco1establishment of sister chromatid cohesion N-acetyltransferase 1181056650710610863Mouse
1314913Snrpd1small nuclear ribonucleoprotein D1181061779610628230Mouse
1321687Abhd3abhydrolase domain containing 3181064441110706784Mouse
16073934930563E18RikRIKEN cDNA 4930563E18 gene181070686010711832Mouse
1316243Mib1MIB E3 ubiquitin protein ligase 1181072552310822969Mouse
14997566Gm25116predicted gene, 25116181075753610757657Mouse
10000599Mir133a-1hgMir133a-1, Mir1b and Mir1a-2 host gene181078172310791734Mouse
1615488Mir133a-1microRNA 133a-1181078290910782976Mouse
4889772Mir1bmicroRNA 1b181078544610785567Mouse
1607564Mir1a-2microRNA 1a-2181078548110785552Mouse
401704395LOC131390103STARR-seq mESC enhancer starr_43802181082122210822720Mouse
5142793Gm18764predicted gene, 18764181085967810860433Mouse
401706535LOC131390104STARR-seq mESC enhancer starr_43806181086786210869410Mouse
9644539Gm35814predicted gene, 35814181088840410997808Mouse
2295642Gm7575predicted gene 7575181092860810931803Mouse
401704844LOC131390105STARR-seq mESC enhancer starr_43807181096319210965111Mouse
401715512LOC131390106STARR-seq mESC enhancer starr_43808181097675810979779Mouse
16135559130001E16RikRIKEN cDNA 9130001E16 gene181100368811008672Mouse
401704045LOC131390107STARR-seq mESC enhancer starr_43809181100370211006868Mouse
1609846Gata6osGATA binding protein 6, opposite strand181104203711052567Mouse
735651Gata6GATA binding protein 6181105251011085636Mouse
39129214LOC109280156VISTA enhancer mm138181137124411374385Mouse
9602464Gm35918predicted gene, 35918181153270911534952Mouse
1622091Rbbp8retinoblastoma binding protein 8, endonuclease181176633311876264Mouse
401833183LOC132444772STARR-positive B cell enhancer ABC_E8703181179029511790596Mouse
163685556LOC128927772CapStarr-seq enhancer MGSCv37_chr18:11816567-11816720181179111511791268Mouse
401706236LOC131390108STARR-seq mESC enhancer starr_43816181182337211824709Mouse
39129367Gm54029predicted gene, 54029181183257111837532Mouse
5142840Gm18713predicted gene, 18713181188534511885615Mouse
10019196Gm41665predicted gene, 41665181194876711952129Mouse
2303944Gm6277predicted gene 6277181195414511972434Mouse
1313590Cables1CDK5 and Abl enzyme substrate 1181197260012078681Mouse
4886550Mir1901microRNA 1901181197341811973495Mouse
401712869LOC131390109STARR-seq mESC enhancer starr_43817181199338411993767Mouse
163671297LOC128927773CapStarr-seq enhancer MGSCv37_chr18:12094438-12094547181206898612069095Mouse
10020782Gm41666predicted gene, 41666181208239912083492Mouse
1557048Tmem241transmembrane protein 241181211319312254604Mouse
401714519LOC131390110STARR-seq mESC enhancer starr_43825181216138712162345Mouse
401713051LOC131390111STARR-seq mESC enhancer starr_43827181221924812220655Mouse
401714443LOC131390112STARR-seq mESC enhancer starr_43828181222199112223218Mouse
401711293LOC131390113STARR-seq mESC enhancer starr_43830181223609712237169Mouse
10006931Gm41667predicted gene, 41667181225461112255527Mouse
1321962Riok3RIO kinase 3181225911412290424Mouse
401834989LOC132444773STARR-positive B cell enhancer ABC_E4239181226156212261863Mouse
14999468Gm25289predicted gene, 25289181229649512296613Mouse
401842190LOC132444774STARR-positive B cell enhancer ABC_E3223181230149412301795Mouse
1552395Rmc1regulator of MON1-CCZ1181230174612331732Mouse
5142196Gm19293predicted gene, 19293181230621612307984Mouse
1553002Npc1NPC intracellular cholesterol transporter 1181232275112369851Mouse
401839612LOC132444775STARR-positive B cell enhancer ABC_E2504181236943812369739Mouse
401708088LOC131390114STARR-seq mESC enhancer starr_43833181237148612372621Mouse
1317260Ankrd29ankyrin repeat domain 29181238541412439067Mouse
5146974Gm16072predicted gene 16072181242045112423060Mouse
401713638LOC131390115STARR-seq mESC enhancer starr_43835181246165412463787Mouse
1615178Lama3laminin, alpha 3181246680612716070Mouse
9594258Gm36232predicted gene, 36232181254257712558319Mouse
401837482LOC132444776STARR-positive B cell enhancer ABC_E8704181257354912573850Mouse
10002157Gm29200predicted gene 29200181263253812637146Mouse
401701264LOC131390116STARR-seq mESC enhancer starr_43837181264138312643156Mouse
401717092LOC131390117STARR-seq mESC enhancer starr_43839181268253012687677Mouse
1614313Ttc39ctetratricopeptide repeat domain 39C181271616812872461Mouse
401709350LOC131390118STARR-seq mESC enhancer starr_43841181272580112726950Mouse
401705060LOC131390119STARR-seq mESC enhancer starr_43842181277065612771744Mouse
10009406Gm41668predicted gene, 41668181277850112781713Mouse
4810540Mir1948microRNA 1948181284786812847952Mouse
1616750Cabyrcalcium binding tyrosine phosphorylation regulated181287414112888203Mouse
2295556Gm7599predicted gene 7599181287551912876316Mouse
1620047Osbpl1aoxysterol binding protein-like 1A181288695513074933Mouse
15023422Gm52343predicted gene, 52343181291056812913391Mouse
9634828Gm36439predicted gene, 36439181293151012942122Mouse
163683104LOC128927774CapStarr-seq enhancer MGSCv37_chr18:12966807-12966996181294135512941544Mouse
401713673LOC131390120STARR-seq mESC enhancer starr_43844181297799112979487Mouse
401709828LOC131390121STARR-seq mESC enhancer starr_43846181299900013000437Mouse
401707032LOC131390122STARR-seq mESC enhancer starr_43847181301966613021223Mouse
2295044Gm5687predicted gene 5687181303145413032162Mouse
1619255Impactimpact, RWD domain protein181308774713126007Mouse
401837758LOC132444777STARR-positive B cell enhancer ABC_E9448181310511413105414Mouse
732950Hrh4histamine receptor H4181314003913156758Mouse
1614762Gm5240predicted gene 5240181326373213264618Mouse
9605301Gm36563predicted gene, 36563181327370013278476Mouse
5143484Gm18083predicted gene, 18083181328512213285862Mouse
401716082LOC131390123STARR-seq mESC enhancer starr_43855181329907013300391Mouse
14998826Gm22251predicted gene, 22251181334275913342865Mouse
401713463LOC131390124STARR-seq mESC enhancer starr_43856181353001013530797Mouse
9673768Gm36689predicted gene, 36689181358071113589742Mouse
9612161Gm36747predicted gene, 36747181364144813656804Mouse
401712272LOC131390125STARR-seq mESC enhancer starr_43858181364538613646663Mouse
9606505Gm36802predicted gene, 36802181365679513675336Mouse
10033225Gm41670predicted gene, 41670181367967113734341Mouse
401703794LOC131390126STARR-seq mESC enhancer starr_43859181371481113715929Mouse
401713144LOC131390127STARR-seq mESC enhancer starr_43861181376788513769633Mouse
1316489Zfp521zinc finger protein 521181382007014105812Mouse
401709434LOC131390128STARR-seq mESC enhancer starr_43863181384478213846720Mouse
401702448LOC131390129STARR-seq mESC enhancer starr_43868181394340013944221Mouse
401704412LOC131390130STARR-seq mESC enhancer starr_43869181402963914032106Mouse
16102106330525I24RikRIKEN cDNA 6330525I24 gene181410608414132520Mouse
401707360LOC131390131STARR-seq mESC enhancer starr_43871181423126214233072Mouse
16118268430422H06RikRIKEN cDNA 8430422H06 gene181436536314411599Mouse
9662445Gm29992predicted gene, 29992181444207914464962Mouse
2295697Gm5160predicted gene 5160181455788114558576Mouse
401711162LOC131390132STARR-seq mESC enhancer starr_43872181456662014568285Mouse
15018983Gm52378predicted gene, 52378181459705214597117Mouse
1614642Gm6457predicted pseudogene 6457181470317014704557Mouse
401702932LOC131390133STARR-seq mESC enhancer starr_43874181472402614726372Mouse
1323628Ss18SS18, subunit of BAF chromatin remodeling complex181475868614817476Mouse
14997868Gm24924predicted gene, 24924181478082414780987Mouse
401710555LOC131390134STARR-seq mESC enhancer starr_43875181480707914808366Mouse
1617483Psma8proteasome subunit alpha 8181483919214895358Mouse
401711519LOC131390135STARR-seq mESC enhancer starr_43877181484668114848025Mouse
163687547LOC128927775STARR-positive B cell enhancer ABC_E1951181491599014916291Mouse
1615849Taf4bTATA-box binding protein associated factor 4b181491630215035160Mouse
7181364Gm21055predicted gene, 21055181496372414965576Mouse
401702142LOC131390136STARR-seq mESC enhancer starr_43878181499434614996517Mouse
16086584930543D07RikRIKEN cDNA 4930543D07 gene181502714915032421Mouse
2308592Gm9474predicted gene 9474181505427815057208Mouse
39130077Gm54035predicted gene, 54035181507701615100739Mouse
1551590Kctd1potassium channel tetramerisation domain containing 1181510174215284503Mouse
16122374933424G05RikRIKEN cDNA 4933424G05 gene181512205215181044Mouse
1617097Mrpl27-psmitochondrial ribosomal protein L27, pseudogene181514429215145014Mouse
401706386LOC131390137STARR-seq mESC enhancer starr_43881181519350415194090Mouse
401702662LOC131390138STARR-seq mESC enhancer starr_43882181519867215199777Mouse
401713938LOC131390139STARR-seq mESC enhancer starr_43883181522577915227606Mouse
39130239Gm57822predicted gene, 57822181532777215342121Mouse
2308283Gm2629predicted gene 2629181534615715347321Mouse
401714057LOC131390140STARR-seq mESC enhancer starr_43885181535731315358765Mouse
10038091Gm41672predicted gene, 41672181536610615385065Mouse
163685481LOC128927776CapStarr-seq enhancer MGSCv37_chr18:15471265-15471418181544581315445966Mouse
9627786Gm30230predicted gene, 30230181545416615479263Mouse
163672020LOC128927777CapStarr-seq enhancer MGSCv37_chr18:15490295-15490483181546484315465031Mouse
401714792LOC131390141STARR-seq mESC enhancer starr_43886181546616515468265Mouse
1609364A830021F12RikRIKEN cDNA A830021F12 gene181548362015597002Mouse
39129449Gm57651predicted gene, 57651181549303115493174Mouse
10183Aqp4aquaporin 4181552245115544039Mouse
2310506Gm7650predicted gene 7650181554753115548424Mouse
1316418Chst9carbohydrate sulfotransferase 9181558483015893214Mouse
401703374LOC131390142STARR-seq mESC enhancer starr_43888181562228215623401Mouse
401713453LOC131390143STARR-seq mESC enhancer starr_43889181568500015686230Mouse
9647966Gm30452predicted gene, 30452181571400315787099Mouse
401715854LOC131390144STARR-seq mESC enhancer starr_43890181579139515792533Mouse
401711080LOC131390145STARR-seq mESC enhancer starr_43891181582793515829087Mouse
401704424LOC131390146STARR-seq mESC enhancer starr_43892181583839415839324Mouse
401704902LOC131390147STARR-seq mESC enhancer starr_43893181586136015864797Mouse
39128681Gm54036predicted gene, 54036181590101215903828Mouse
401712334LOC131390148STARR-seq mESC enhancer starr_43895181595447815955985Mouse
2294789Gm10036predicted gene 10036181596583115966427Mouse
14997433Gm24228predicted gene, 24228181600771816007846Mouse
401714015LOC131390149STARR-seq mESC enhancer starr_43896181606271516063735Mouse
39131071Gm57653predicted gene, 57653181610749816107634Mouse
1621346Gm4835predicted pseudogene 4835181612134916123256Mouse
9624013Gm30512predicted gene, 30512181615456016169340Mouse
10003446Gm41673predicted gene, 41673181617019216173413Mouse
401715832LOC131390150STARR-seq mESC enhancer starr_43898181617095116173623Mouse
9602533Gm30620predicted gene, 30620181617667516248481Mouse
401708456LOC131390151STARR-seq mESC enhancer starr_43900181624491316246409Mouse
2294288Gm6078predicted gene 6078181632709216327705Mouse
1613780Gm7665predicted pseudogene 7665181640756516408066Mouse
9606965Gm30765predicted gene, 30765181642688116451650Mouse
401701278LOC131390152STARR-seq mESC enhancer starr_43904181645196216452987Mouse
401714624LOC131390153STARR-seq mESC enhancer starr_43905181647010316471088Mouse
401716357LOC131390154STARR-seq mESC enhancer starr_43906181653130816532520Mouse
401716329LOC131390155STARR-seq mESC enhancer starr_43907181657542016576883Mouse
401710682LOC131390156STARR-seq mESC enhancer starr_43908181658820816588692Mouse
401710779LOC131390157STARR-seq mESC enhancer starr_43909181662311416624245Mouse
401712599LOC131390158STARR-seq mESC enhancer starr_43910181671316216714787Mouse
401715288LOC131390159STARR-seq mESC enhancer starr_43911181672089516723667Mouse
731821Cdh2cadherin 2181672193416942303Mouse
401712125LOC131390160STARR-seq mESC enhancer starr_43913181680267016803570Mouse
401708878LOC131390161STARR-seq mESC enhancer starr_43914181684598316847350Mouse
7181121Gm15328predicted gene 15328181694946416955840Mouse
2312117Gm7670predicted gene 7670181697229716973053Mouse
401702566LOC131390162STARR-seq mESC enhancer starr_43915181698194116982974Mouse
5143163Gm18399predicted gene, 18399181708410517084924Mouse
401714910LOC131390163STARR-seq mESC enhancer starr_43916181709433917095602Mouse
14997310Gm22470predicted gene, 22470181716771917167848Mouse
16239181700001G01RikRIKEN cDNA 1700001G01 gene181716856517270616Mouse
10029071Gm41674predicted gene, 41674181718362817191521Mouse
401716617LOC131390164STARR-seq mESC enhancer starr_43917181720185417203470Mouse
401703908LOC131390165STARR-seq mESC enhancer starr_43918181735110817352020Mouse
36462534921533I20RikRiken cDNA 4921533I20 gene181736754017368539Mouse
9656780Gm30960predicted gene, 30960181738769617390079Mouse
401709123LOC131390166STARR-seq mESC enhancer starr_43919181742314017425208Mouse
5142625Gm18928predicted gene, 18928181742370417424922Mouse
401706989LOC131390167STARR-seq mESC enhancer starr_43920181744874917450434Mouse
401713763LOC131390168STARR-seq mESC enhancer starr_43921181745114417452470Mouse
401702247LOC131390169STARR-seq mESC enhancer starr_43922181754082517542453Mouse
401708715LOC131390170STARR-seq mESC enhancer starr_43923181755137917552952Mouse
401716492LOC131390171STARR-seq mESC enhancer starr_43924181757965617580238Mouse
401703919LOC131390172STARR-seq mESC enhancer starr_43925181758365717583943Mouse
401705662LOC131390173STARR-seq mESC enhancer starr_43926181759630517598564Mouse
9666718Gm31018predicted gene, 31018181761202417666986Mouse
401715191LOC131390174STARR-seq mESC enhancer starr_43927181769778517699229Mouse
16086674930545E07RikRIKEN cDNA 4930545E07 gene181770180317714047Mouse
401710729LOC131390175STARR-seq mESC enhancer starr_43928181770749117708911Mouse
401715703LOC131390176STARR-seq mESC enhancer starr_43929181776740917768472Mouse
401714006LOC131390177STARR-seq mESC enhancer starr_43930181796081517961619Mouse
39128857Gm54037predicted gene, 54037181796129918048477Mouse
401713697LOC131390178STARR-seq mESC enhancer starr_43932181800698118008588Mouse
39129591Gm57650predicted gene, 57650181811648018116620Mouse
401702444LOC131390179STARR-seq mESC enhancer starr_43933181819138618192791Mouse
401704973LOC131390180STARR-seq mESC enhancer starr_43934181819611818198265Mouse
401716513LOC131390181STARR-seq mESC enhancer starr_43935181834146918342532Mouse
401713132LOC131390182STARR-seq mESC enhancer starr_43936181874348218745107Mouse
401707883LOC131390183STARR-seq mESC enhancer starr_43939181886261818863636Mouse
401702184LOC131390184STARR-seq mESC enhancer starr_43940181895597818957322Mouse
401713513LOC131390185STARR-seq mESC enhancer starr_43941181896122618962793Mouse
401702097LOC131390186STARR-seq mESC enhancer starr_43942181896915918970705Mouse
401705545LOC131390187STARR-seq mESC enhancer starr_43943181898952518990731Mouse
401710705LOC131390188STARR-seq mESC enhancer starr_43945181911659319118808Mouse
401700686LOC131390189STARR-seq mESC enhancer starr_43946181919588219197520Mouse
9635164Gm31086predicted gene, 31086181930081819321113Mouse
10020117Gm38432predicted gene, 38432181949901719512964Mouse
401702103LOC131390190STARR-seq mESC enhancer starr_43950181955539019556269Mouse
2310323Gm7718predicted gene 7718181958064119587045Mouse
401707091LOC131390191STARR-seq mESC enhancer starr_43951181958539419586935Mouse
2310322Gm7720predicted gene 7720181968298319683453Mouse
401704109LOC131390192STARR-seq mESC enhancer starr_43952181968648319687897Mouse
401704853LOC131390193STARR-seq mESC enhancer starr_43953181985871619860472Mouse
401715474LOC131390194STARR-seq mESC enhancer starr_43954181988983219891640Mouse
401703623LOC131390195STARR-seq mESC enhancer starr_43955181989523219896519Mouse
401713138LOC131390196STARR-seq mESC enhancer starr_43956181995934919960544Mouse
1551885Dsc3desmocollin 3182009398720135465Mouse
1319764Dsc2desmocollin 2182016369020192611Mouse
1321864Dsc1desmocollin 1182021652820247830Mouse
401714051LOC131390197STARR-seq mESC enhancer starr_43958182032096420322097Mouse
401707585LOC131390198STARR-seq mESC enhancer starr_43959182032329320324573Mouse
1320532Dsg1cdesmoglein 1 gamma182038039720418088Mouse
401715518LOC131390199STARR-seq mESC enhancer starr_43960182038626720387333Mouse
9599626Gm31237predicted gene, 31237182042014620445363Mouse
401708463LOC131390200STARR-seq mESC enhancer starr_43962182043473120436203Mouse
1620127Dsg1adesmoglein 1 alpha182044398220476407Mouse
1621345Dsg1bdesmoglein 1 beta182050978620545240Mouse
1550419Dsg4desmoglein 4182056923420606191Mouse
401706939LOC131390201STARR-seq mESC enhancer starr_43965182058821420589248Mouse
401714841LOC131390202STARR-seq mESC enhancer starr_43966182062148420623681Mouse
2303698Gm5688predicted gene 5688182063227620633654Mouse
1620126Dsg3desmoglein 3182064333120674367Mouse
1623410Tpi-rs10triosephosphate isomerase related sequence 10182068108520682415Mouse
12798371Gm46630predicted gene, 46630182069058520691063Mouse
1322447Dsg2desmoglein 2182069124720737583Mouse
401706311LOC131390203STARR-seq mESC enhancer starr_43967182072178520723484Mouse
9630623Gm16090predicted gene 16090182073102120798317Mouse
11463Ttrtransthyretin182079726620807383Mouse
2294505Gm10269predicted gene 10269182081561420816059Mouse
737377B4galt6UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6182081765620879461Mouse
9679391Gm31437predicted gene, 31437182085664220859060Mouse
401708476LOC131390204STARR-seq mESC enhancer starr_43979182088196220884255Mouse
401713387LOC131390205STARR-seq mESC enhancer starr_43980182089536020896200Mouse
401701106LOC131390206STARR-seq mESC enhancer starr_43983182090111320902860Mouse
401706771LOC131390207STARR-seq mESC enhancer starr_43987182090816420911797Mouse
401703239LOC131390208STARR-seq mESC enhancer starr_43988182094450420947519Mouse
1319255Trappc8trafficking protein particle complex 8182095026821033851Mouse
401842161LOC132444778STARR-positive B cell enhancer ABC_E11655182102939121029691Mouse
401717037LOC131390209STARR-seq mESC enhancer starr_43995182107513221077366Mouse
1315558Rnf125ring finger protein 125182107767221120416Mouse
401712755LOC131390210STARR-seq mESC enhancer starr_43996182108184421084738Mouse
163687732LOC128927778CapStarr-seq enhancer MGSCv37_chr18:21115655-21115838182109021121090394Mouse
401708346LOC131390211STARR-seq mESC enhancer starr_43997182111330421114646Mouse
731898Rnf138ring finger protein 138182113420221161281Mouse
401839154LOC132444779STARR-positive B cell enhancer ABC_E3224182113475521135056Mouse
401717169LOC131390212STARR-seq mESC enhancer starr_43999182114051521141703Mouse
401706986LOC131390213STARR-seq mESC enhancer starr_44001182117540721178176Mouse
401706096LOC131390214STARR-seq mESC enhancer starr_44006182119914421200912Mouse
10893Mep1bmeprin 1 beta182120540121233256Mouse
1621830Gm6378predicted pseudogene 6378182120968821210191Mouse
401704953LOC131390215STARR-seq mESC enhancer starr_44007182121640921219754Mouse
1621952Garem1GRB2 associated regulator of MAPK1 subtype 1182125791621433196Mouse
401712364LOC131390216STARR-seq mESC enhancer starr_44011182139215421395328Mouse
2295204Gm7758predicted gene 7758182145086021451310Mouse
10003836Gm41675predicted gene, 41675182145182821461132Mouse
14998349Gm22886predicted gene, 22886182151388221513988Mouse
401714109LOC131390217STARR-seq mESC enhancer starr_44013182154141821542298Mouse
401711233LOC131390218STARR-seq mESC enhancer starr_44015182156661121568328Mouse
9648889Gm31646predicted gene, 31646182161355021782652Mouse
2309282Gm4837predicted gene 4837182162556421627156Mouse
401710162LOC131390219STARR-seq mESC enhancer starr_44016182164518921647637Mouse
1621344Klhl14kelch-like 14182168343621805986Mouse
401714307LOC131390220STARR-seq mESC enhancer starr_44017182171832021720655Mouse
401714516LOC131390221STARR-seq mESC enhancer starr_44018182172225621723722Mouse
16113114930426D05RikRIKEN cDNA 4930426D05 gene182178462221789164Mouse
401710663LOC131390222STARR-seq mESC enhancer starr_44019182184215721843320Mouse
1317774Ccdc178coiled coil domain containing 178182194395422304453Mouse
401706197LOC131390223STARR-seq mESC enhancer starr_44020182224545022246994Mouse
401716260LOC131390224STARR-seq mESC enhancer starr_44021182225583922257099Mouse
401705426LOC131390225STARR-seq mESC enhancer starr_44023182236178422363337Mouse
401702772LOC131390226STARR-seq mESC enhancer starr_44024182242995222431458Mouse
2294298Gm5968predicted gene 5968182245212222452985Mouse
401716655LOC131390227STARR-seq mESC enhancer starr_44025182245750622458889Mouse
10038932Gm41676predicted gene, 41676182246789722477167Mouse
1314159Asxl3ASXL transcriptional regulator 3182247719522663284Mouse
401701716LOC131390228STARR-seq mESC enhancer starr_44026182254238822543626Mouse
401702994LOC131390229STARR-seq mESC enhancer starr_44028182255626022557605Mouse
401709580LOC131390230STARR-seq mESC enhancer starr_44029182276313122764155Mouse
1618005Nol4nucleolar protein 4182282620923174926Mouse
401716875LOC131390231STARR-seq mESC enhancer starr_44030182289356222895321Mouse
401704766LOC131390232STARR-seq mESC enhancer starr_44031182293430022936653Mouse
401705503LOC131390233STARR-seq mESC enhancer starr_44032182301027523011467Mouse
401703312LOC131390234STARR-seq mESC enhancer starr_44033182307444223075422Mouse
401700901LOC131390235STARR-seq mESC enhancer starr_44034182310170523102739Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558743Kcal1_mkilocalorie 1 (mouse)Not determined181901887453018992Mouse
11532716Sluc41c_msusceptibility to lung cancer 41c (mouse)182261991456620127Mouse
11532715Sluc41b_msusceptibility to lung cancer 41b (mouse)182261991456620127Mouse
12910787Pwbwq18_mpost-weaning body weight QTL 18 (mouse)181826552930570819Mouse
11532710Sluc41a_msusceptibility to lung cancer 41a (mouse)182261991456620127Mouse
11532709Sluc41_msusceptibility to lung cancer 41 (mouse)182095369457590708Mouse
1300638Im7_mimmunoregulatory 7 (mouse)Not determined181901887453018992Mouse
1558873Hrtfm7_mheart failure modifier 7 (mouse)Not determined18808696442087106Mouse
4142127Rafaril_mRafar interacting locus (mouse)Not determined18123108555Mouse
14928307Manh83_mmandible shape 83 (mouse)18126902168Mouse
12910805Pwbwq17_mpost-weaning body weight QTL 17 (mouse)181826552930570819Mouse
1300994Pvcan3_mprotection against vaginal candidiasis 3 (mouse)Not determined181619964050199776Mouse
1301570Sluc14_msusceptibility to lung cancer 14 (mouse)Not determined182261991456620127Mouse
13504732Cath6_mcarotid atherosclerosis 6 (mouse)181363712647637126Mouse
4142250Idd21.3_minsulin dependent diabetes susceptibility 21.3 (mouse)Not determined18610840421646477Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
1300877Adip8_madiposity 8 (mouse)Not determined182261991456620127Mouse
11354953Mom21_mmodifier of Min 21 (mouse)18128893823Mouse
12910819Ogrq6_moverall growth rate QTL 6 (mouse)181826552930570819Mouse
13207585Mwmlpt3_mMorris water maze latency to platform, training, 3 (mouse)18133547739Mouse
1301307Phospq1_mphospholipid QTL 1 (mouse)Not determined181813970452139859Mouse
13207589Mwmlpa3_mMorris water maze latency to platform, all, 3 (mouse)18133547739Mouse
1301950Otx2m1_morthodenticle homolog 2 (Drosophila) modifier 1 (mouse)Not determined182156868236187740Mouse
13432188Actrse3_mactivity response to saline/ethanol 3 (mouse)181237454818574548Mouse
12801458Intmrm3_mintima/media ratio modifier 3 (mouse)18131720756Mouse
13432190Actrse5_mactivity response to saline/ethanol 5 (mouse)181217454817574548Mouse
12801462Intim3_mintima modifier 3 (mouse)18131720756Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181403002367098962Mouse
13463476Hctq8_mhematocrit QTL 8 (mouse)182121758055217727Mouse
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060933072Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:3606900 MouseQtl

RGD Curation Notes
Note Type Note Reference