Osbpl1a (oxysterol binding protein-like 1A) - Rat Genome Database

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Gene: Osbpl1a (oxysterol binding protein-like 1A) Mus musculus
Analyze
Symbol: Osbpl1a
Name: oxysterol binding protein-like 1A
RGD ID: 1620047
MGI Page MGI
Description: Predicted to enable cholesterol binding activity and sterol transporter activity. Predicted to act upstream of or within lipid transport. Predicted to be located in late endosome and organelle membrane contact site. Predicted to be active in cytosol; perinuclear endoplasmic reticulum; and plasma membrane. Is expressed in several structures, including central nervous system; genitourinary system; immune system; liver; and retina. Orthologous to human OSBPL1A (oxysterol binding protein like 1A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: G430090F17Rik; Gm753; ORP-1; OSBP-related protein 1; Osbpl1b; oxysterol-binding protein-related protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391812,886,955 - 13,074,933 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1812,888,371 - 13,074,898 (-)EnsemblGRCm39 Ensembl
GRCm381812,753,898 - 12,941,871 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1812,755,314 - 12,941,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371812,914,537 - 13,100,229 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361812,899,197 - 13,084,889 (-)NCBIMGSCv36mm8
Celera1812,987,816 - 13,172,462 (-)NCBICelera
Cytogenetic Map18A1NCBI
cM Map186.78NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (EXP)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
buspirone  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
choline  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cocaine  (ISO)
cyclosporin A  (EXP,ISO)
decabromodiphenyl ether  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fenthion  (EXP)
fenvalerate  (ISO)
fipronil  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
glyphosate  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
levofloxacin  (ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methoxychlor  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
ozone  (EXP)
paracetamol  (EXP)
parathion  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
pirinixic acid  (EXP)
rac-lactic acid  (ISO)
selenium atom  (ISO)
simvastatin  (ISO)
tamoxifen  (EXP)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
titanium dioxide  (EXP)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vitamin E  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11752298   PMID:12215260   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15142957  
PMID:15489334   PMID:15782199   PMID:15871461   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17303778   PMID:18799693   PMID:20690035   PMID:21267068   PMID:21873635   PMID:22623793  
PMID:32325033  


Genomics

Comparative Map Data
Osbpl1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391812,886,955 - 13,074,933 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1812,888,371 - 13,074,898 (-)EnsemblGRCm39 Ensembl
GRCm381812,753,898 - 12,941,871 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1812,755,314 - 12,941,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371812,914,537 - 13,100,229 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361812,899,197 - 13,084,889 (-)NCBIMGSCv36mm8
Celera1812,987,816 - 13,172,462 (-)NCBICelera
Cytogenetic Map18A1NCBI
cM Map186.78NCBI
OSBPL1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381824,162,045 - 24,397,824 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1824,162,045 - 24,397,880 (-)EnsemblGRCh38hg38GRCh38
GRCh371821,742,009 - 21,977,788 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361819,996,007 - 20,231,788 (-)NCBINCBI36Build 36hg18NCBI36
Build 341819,996,010 - 20,231,788NCBI
Celera1818,558,319 - 18,792,861 (-)NCBICelera
Cytogenetic Map18q11.2NCBI
HuRef1818,598,065 - 18,833,825 (-)NCBIHuRef
CHM1_11821,669,277 - 21,904,868 (-)NCBICHM1_1
T2T-CHM13v2.01824,356,384 - 24,592,191 (-)NCBIT2T-CHM13v2.0
Osbpl1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8184,178,734 - 4,383,511 (-)NCBIGRCr8
mRatBN7.2183,904,006 - 4,094,635 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl183,904,006 - 4,094,585 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,127,907 - 4,317,941 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0184,915,466 - 5,105,503 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0184,174,553 - 4,365,195 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0184,097,011 - 4,294,136 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,097,012 - 4,294,136 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0184,089,698 - 4,282,305 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera183,960,347 - 4,144,308 (-)NCBICelera
Cytogenetic Map18p13NCBI
Osbpl1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540212,530,135 - 12,718,703 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540212,530,130 - 12,718,703 (-)NCBIChiLan1.0ChiLan1.0
OSBPL1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21741,594,237 - 41,857,937 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11827,286,833 - 27,550,335 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01817,414,824 - 17,669,178 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11821,037,587 - 21,270,216 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1821,037,586 - 21,270,216 (-)Ensemblpanpan1.1panPan2
OSBPL1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1763,995,570 - 64,223,213 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl763,995,184 - 64,222,157 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha763,444,473 - 63,672,084 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0764,054,333 - 64,281,774 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl764,054,357 - 64,281,762 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1763,724,290 - 63,951,485 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0763,738,846 - 63,966,751 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0764,043,599 - 64,271,300 (+)NCBIUU_Cfam_GSD_1.0
Osbpl1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494460,070,367 - 60,269,932 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365503,544,419 - 3,746,059 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365503,545,941 - 3,745,716 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OSBPL1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6108,997,735 - 109,221,010 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16108,997,730 - 109,241,950 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26101,663,953 - 101,813,634 (-)NCBISscrofa10.2Sscrofa10.2susScr3
OSBPL1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11856,122,942 - 56,370,730 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1856,144,766 - 56,369,599 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605030,889,832 - 31,120,382 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Osbpl1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247707,864,036 - 8,054,881 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247707,855,776 - 8,054,886 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Osbpl1a
7147 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3294
Count of miRNA genes:715
Interacting mature miRNAs:937
Transcripts:ENSMUST00000074352, ENSMUST00000117361, ENSMUST00000118313, ENSMUST00000119043, ENSMUST00000119512, ENSMUST00000121774, ENSMUST00000121808, ENSMUST00000121888, ENSMUST00000122175, ENSMUST00000124570, ENSMUST00000132594, ENSMUST00000141651, ENSMUST00000142467, ENSMUST00000143077, ENSMUST00000145777, ENSMUST00000147197, ENSMUST00000154614, ENSMUST00000155650
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142127Rafaril_mRafar interacting locus (mouse)Not determined18123108555Mouse
14928307Manh83_mmandible shape 83 (mouse)18126902168Mouse
11354953Mom21_mmodifier of Min 21 (mouse)18128893823Mouse
12801462Intim3_mintima modifier 3 (mouse)18131720756Mouse
12801458Intmrm3_mintima/media ratio modifier 3 (mouse)18131720756Mouse
13207585Mwmlpt3_mMorris water maze latency to platform, training, 3 (mouse)18133547739Mouse
13207589Mwmlpa3_mMorris water maze latency to platform, all, 3 (mouse)18133547739Mouse
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060933072Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
4142250Idd21.3_minsulin dependent diabetes susceptibility 21.3 (mouse)Not determined18610840421646477Mouse
1558873Hrtfm7_mheart failure modifier 7 (mouse)Not determined18808696442087106Mouse
13432190Actrse5_mactivity response to saline/ethanol 5 (mouse)181217454817574548Mouse
13432188Actrse3_mactivity response to saline/ethanol 3 (mouse)181237454818574548Mouse

Markers in Region
D4Mit40  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384127,416,374 - 127,416,500UniSTSGRCm38
GRCm381812,828,325 - 12,828,938UniSTSGRCm38
MGSCv374127,093,618 - 127,093,744UniSTSGRCm37
MGSCv371812,986,834 - 12,987,447UniSTSGRCm37
Celera1813,060,225 - 13,060,838UniSTS
Celera4125,750,708 - 125,750,834UniSTS
Cytogenetic Map18A2UniSTS
cM Map459.0UniSTS
Whitehead Genetic455.7UniSTS
Whitehead/MRC_RH41646.54UniSTS
Whitehead_YAC4 UniSTS
UniSTS:237746  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381812,798,893 - 12,799,185UniSTSGRCm38
MGSCv371812,957,402 - 12,957,694UniSTSGRCm37
Celera1813,030,734 - 13,031,026UniSTS
Cytogenetic Map18A2UniSTS
Osbpl1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18A2UniSTS
cM Map18 UniSTS
RH134647  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381812,757,604 - 12,758,872UniSTSGRCm38
MGSCv371812,916,113 - 12,917,381UniSTSGRCm37
Celera1812,989,392 - 12,990,660UniSTS
Cytogenetic Map18A2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_207530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004939876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB017026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC102055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF394063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY536214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB667982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC076637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG092905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY248497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY249673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY715608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO044459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO426253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV068702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000074352   ⟹   ENSMUSP00000073957
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,371 - 13,074,898 (-)Ensembl
GRCm38.p6 Ensembl1812,755,314 - 12,941,841 (-)Ensembl
RefSeq Acc Id: ENSMUST00000117361   ⟹   ENSMUSP00000112681
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,996,437 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,863,380 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118313   ⟹   ENSMUSP00000113735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,995,770 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,862,713 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119043   ⟹   ENSMUSP00000113357
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,395 - 12,952,964 (-)Ensembl
GRCm38.p6 Ensembl1812,755,338 - 12,819,907 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119512   ⟹   ENSMUSP00000113914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,889,249 - 13,013,034 (-)Ensembl
GRCm38.p6 Ensembl1812,756,192 - 12,879,977 (-)Ensembl
RefSeq Acc Id: ENSMUST00000121774   ⟹   ENSMUSP00000113268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,391 - 12,995,971 (-)Ensembl
GRCm38.p6 Ensembl1812,755,334 - 12,862,914 (-)Ensembl
RefSeq Acc Id: ENSMUST00000121808   ⟹   ENSMUSP00000113841
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,371 - 12,995,730 (-)Ensembl
GRCm38.p6 Ensembl1812,755,314 - 12,862,673 (-)Ensembl
RefSeq Acc Id: ENSMUST00000121888   ⟹   ENSMUSP00000112895
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,995,480 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,862,423 (-)Ensembl
RefSeq Acc Id: ENSMUST00000122175   ⟹   ENSMUSP00000113491
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1813,031,174 - 13,074,834 (-)Ensembl
GRCm38.p6 Ensembl1812,898,117 - 12,941,777 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124570   ⟹   ENSMUSP00000122291
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,895,659 - 12,993,308 (-)Ensembl
GRCm38.p6 Ensembl1812,762,602 - 12,860,251 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132594
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1813,003,275 - 13,074,898 (-)Ensembl
GRCm38.p6 Ensembl1812,870,218 - 12,941,841 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141651
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1813,061,082 - 13,074,849 (-)Ensembl
GRCm38.p6 Ensembl1812,928,025 - 12,941,792 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142467   ⟹   ENSMUSP00000157336
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1813,066,645 - 13,074,846 (-)Ensembl
GRCm38.p6 Ensembl1812,933,588 - 12,941,789 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143077   ⟹   ENSMUSP00000122967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,899,860 - 12,996,348 (-)Ensembl
GRCm38.p6 Ensembl1812,766,803 - 12,863,291 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145777
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,895,614 - 12,900,194 (-)Ensembl
GRCm38.p6 Ensembl1812,762,557 - 12,767,137 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147197   ⟹   ENSMUSP00000114913
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1813,040,002 - 13,074,863 (-)Ensembl
GRCm38.p6 Ensembl1812,906,945 - 12,941,806 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,901,523 - 13,022,103 (-)Ensembl
GRCm38.p6 Ensembl1812,768,466 - 12,889,046 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155650   ⟹   ENSMUSP00000120439
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,904,356 - 13,002,164 (-)Ensembl
GRCm38.p6 Ensembl1812,771,299 - 12,869,107 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234118   ⟹   ENSMUSP00000157020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,987,516 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,854,459 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234194   ⟹   ENSMUSP00000157017
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,988,321 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,855,264 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234427   ⟹   ENSMUSP00000157046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,896,036 - 12,995,297 (-)Ensembl
GRCm38.p6 Ensembl1812,762,979 - 12,862,240 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234428   ⟹   ENSMUSP00000156984
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,388 - 12,952,655 (-)Ensembl
GRCm38.p6 Ensembl1812,755,331 - 12,819,598 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234871   ⟹   ENSMUSP00000157342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,996,497 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,863,440 (-)Ensembl
RefSeq Acc Id: ENSMUST00000235027   ⟹   ENSMUSP00000157209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1812,888,385 - 12,994,262 (-)Ensembl
GRCm38.p6 Ensembl1812,755,328 - 12,861,205 (-)Ensembl
RefSeq Acc Id: NM_001252489   ⟹   NP_001239418
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 13,013,036 (-)NCBI
GRCm381812,755,312 - 12,879,979 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252490   ⟹   NP_001239419
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 12,996,437 (-)NCBI
GRCm381812,755,312 - 12,863,380 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252491   ⟹   NP_001239420
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,995,740 (-)NCBI
GRCm381812,755,312 - 12,862,713 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252492   ⟹   NP_001239421
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 12,995,770 (-)NCBI
GRCm381812,755,312 - 12,862,713 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252493   ⟹   NP_001239422
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 12,995,770 (-)NCBI
GRCm381812,755,312 - 12,862,713 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_207530   ⟹   NP_997413
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 13,074,898 (-)NCBI
GRCm381812,755,312 - 12,941,841 (-)NCBI
MGSCv371812,914,537 - 13,100,229 (-)RGD
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_045524
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,369 - 12,952,964 (-)NCBI
GRCm381812,755,312 - 12,819,907 (-)NCBI
Celera1812,987,100 - 13,172,583 (-)ENTREZGENE
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006526141   ⟹   XP_006526204
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,074,919 (-)NCBI
GRCm381812,753,898 - 12,941,867 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006526142   ⟹   XP_006526205
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,362 - 13,074,928 (-)NCBI
GRCm381812,755,305 - 12,941,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006526143   ⟹   XP_006526206
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,074,928 (-)NCBI
GRCm381812,753,898 - 12,941,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006526144   ⟹   XP_006526207
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,074,928 (-)NCBI
GRCm381812,753,898 - 12,941,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006526147   ⟹   XP_006526210
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,993,303 (-)NCBI
GRCm381812,753,898 - 12,860,246 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006526148   ⟹   XP_006526211
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,013,029 (-)NCBI
GRCm381812,753,898 - 12,879,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317960   ⟹   XP_017173449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,043,059 (-)NCBI
GRCm381812,753,898 - 12,910,002 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317961   ⟹   XP_017173450
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,994,338 (-)NCBI
GRCm381812,753,898 - 12,861,281 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317962   ⟹   XP_017173451
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,996,492 (-)NCBI
GRCm381812,753,898 - 12,863,435 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317963   ⟹   XP_017173452
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,996,471 (-)NCBI
GRCm381812,753,898 - 12,863,414 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317964   ⟹   XP_017173453
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,362 - 12,996,112 (-)NCBI
GRCm381812,755,305 - 12,863,055 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017317965   ⟹   XP_017173454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,362 - 13,004,521 (-)NCBI
GRCm381812,755,305 - 12,871,464 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250564   ⟹   XP_030106424
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,987,555 (-)NCBI
GRCm381812,753,898 - 12,854,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250565   ⟹   XP_030106425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,074,908 (-)NCBI
GRCm381812,753,898 - 12,941,857 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250566   ⟹   XP_030106426
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,362 - 13,074,908 (-)NCBI
GRCm381812,755,305 - 12,941,858 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250567   ⟹   XP_030106427
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,042,973 (-)NCBI
GRCm381812,753,898 - 12,909,916 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030250568   ⟹   XP_030106428
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,996,112 (-)NCBI
GRCm381812,753,898 - 12,863,055 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161233   ⟹   XP_036017126
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 13,074,912 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161235   ⟹   XP_036017128
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,996,112 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161236   ⟹   XP_036017129
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,996,345 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161237   ⟹   XP_036017130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,886,955 - 12,987,538 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161238   ⟹   XP_036017131
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,888,362 - 12,996,112 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004939876
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391812,890,719 - 13,074,933 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001239418 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239419 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239420 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239421 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239422 (Get FASTA)   NCBI Sequence Viewer  
  NP_997413 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526204 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526205 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526206 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526207 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526210 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526211 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173449 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173450 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173451 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173452 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173453 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173454 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106424 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106425 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106426 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106427 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106428 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017126 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017128 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017129 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017130 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017131 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH31735 (Get FASTA)   NCBI Sequence Viewer  
  AAH57194 (Get FASTA)   NCBI Sequence Viewer  
  AAH76637 (Get FASTA)   NCBI Sequence Viewer  
  AAK71661 (Get FASTA)   NCBI Sequence Viewer  
  AAT06024 (Get FASTA)   NCBI Sequence Viewer  
  BAA33012 (Get FASTA)   NCBI Sequence Viewer  
  BAC41077 (Get FASTA)   NCBI Sequence Viewer  
  BAE21296 (Get FASTA)   NCBI Sequence Viewer  
  BAE21854 (Get FASTA)   NCBI Sequence Viewer  
  BAE40301 (Get FASTA)   NCBI Sequence Viewer  
  EDL01571 (Get FASTA)   NCBI Sequence Viewer  
  EDL01572 (Get FASTA)   NCBI Sequence Viewer  
  EDL01573 (Get FASTA)   NCBI Sequence Viewer  
  EDL01574 (Get FASTA)   NCBI Sequence Viewer  
  EDL01575 (Get FASTA)   NCBI Sequence Viewer  
  EDL01576 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000073957
  ENSMUSP00000073957.5
  ENSMUSP00000112681
  ENSMUSP00000112681.2
  ENSMUSP00000112895
  ENSMUSP00000112895.2
  ENSMUSP00000113268
  ENSMUSP00000113268.2
  ENSMUSP00000113357.2
  ENSMUSP00000113491.2
  ENSMUSP00000113735
  ENSMUSP00000113735.2
  ENSMUSP00000113841
  ENSMUSP00000113841.2
  ENSMUSP00000113914
  ENSMUSP00000113914.2
  ENSMUSP00000114913.2
  ENSMUSP00000120439.2
  ENSMUSP00000122291.3
  ENSMUSP00000122967.2
  ENSMUSP00000156984.2
  ENSMUSP00000157017.2
  ENSMUSP00000157020
  ENSMUSP00000157020.2
  ENSMUSP00000157046.2
  ENSMUSP00000157209
  ENSMUSP00000157209.2
  ENSMUSP00000157336.2
  ENSMUSP00000157342
  ENSMUSP00000157342.2
GenBank Protein Q91XL9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_997413   ⟸   NM_207530
- Peptide Label: isoform 1
- UniProtKB: Q673L8 (UniProtKB/Swiss-Prot),   Q3TH97 (UniProtKB/Swiss-Prot),   O88318 (UniProtKB/Swiss-Prot),   Q6DFU6 (UniProtKB/Swiss-Prot),   Q91XL9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239418   ⟸   NM_001252489
- Peptide Label: isoform 2
- UniProtKB: Q3V156 (UniProtKB/TrEMBL),   A0A3Q4EI24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239419   ⟸   NM_001252490
- Peptide Label: isoform 3
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239420   ⟸   NM_001252491
- Peptide Label: isoform 3
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239422   ⟸   NM_001252493
- Peptide Label: isoform 3
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239421   ⟸   NM_001252492
- Peptide Label: isoform 3
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526205   ⟸   XM_006526142
- Peptide Label: isoform X1
- UniProtKB: Q673L8 (UniProtKB/Swiss-Prot),   Q3TH97 (UniProtKB/Swiss-Prot),   O88318 (UniProtKB/Swiss-Prot),   Q6DFU6 (UniProtKB/Swiss-Prot),   Q91XL9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006526206   ⟸   XM_006526143
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006526204   ⟸   XM_006526141
- Peptide Label: isoform X1
- UniProtKB: Q673L8 (UniProtKB/Swiss-Prot),   Q3TH97 (UniProtKB/Swiss-Prot),   O88318 (UniProtKB/Swiss-Prot),   Q6DFU6 (UniProtKB/Swiss-Prot),   Q91XL9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006526207   ⟸   XM_006526144
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006526211   ⟸   XM_006526148
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526210   ⟸   XM_006526147
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173449   ⟸   XM_017317960
- Peptide Label: isoform X4
- UniProtKB: A0A3Q4EI24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173454   ⟸   XM_017317965
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173451   ⟸   XM_017317962
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173452   ⟸   XM_017317963
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173453   ⟸   XM_017317964
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173450   ⟸   XM_017317961
- Peptide Label: isoform X5
- UniProtKB: A0A3Q4EI24 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030106425   ⟸   XM_030250565
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106427   ⟸   XM_030250567
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106428   ⟸   XM_030250568
- Peptide Label: isoform X8
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106424   ⟸   XM_030250564
- Peptide Label: isoform X6
- UniProtKB: A0A3Q4EG54 (UniProtKB/TrEMBL),   A0A3Q4EI24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106426   ⟸   XM_030250566
- Peptide Label: isoform X7
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000113914   ⟸   ENSMUST00000119512
RefSeq Acc Id: ENSMUSP00000122291   ⟸   ENSMUST00000124570
RefSeq Acc Id: ENSMUSP00000113357   ⟸   ENSMUST00000119043
RefSeq Acc Id: ENSMUSP00000122967   ⟸   ENSMUST00000143077
RefSeq Acc Id: ENSMUSP00000113735   ⟸   ENSMUST00000118313
RefSeq Acc Id: ENSMUSP00000114913   ⟸   ENSMUST00000147197
RefSeq Acc Id: ENSMUSP00000073957   ⟸   ENSMUST00000074352
RefSeq Acc Id: ENSMUSP00000112681   ⟸   ENSMUST00000117361
RefSeq Acc Id: ENSMUSP00000157336   ⟸   ENSMUST00000142467
RefSeq Acc Id: ENSMUSP00000157209   ⟸   ENSMUST00000235027
RefSeq Acc Id: ENSMUSP00000157342   ⟸   ENSMUST00000234871
RefSeq Acc Id: ENSMUSP00000156984   ⟸   ENSMUST00000234428
RefSeq Acc Id: ENSMUSP00000157046   ⟸   ENSMUST00000234427
RefSeq Acc Id: ENSMUSP00000113491   ⟸   ENSMUST00000122175
RefSeq Acc Id: ENSMUSP00000120439   ⟸   ENSMUST00000155650
RefSeq Acc Id: ENSMUSP00000113268   ⟸   ENSMUST00000121774
RefSeq Acc Id: ENSMUSP00000112895   ⟸   ENSMUST00000121888
RefSeq Acc Id: ENSMUSP00000113841   ⟸   ENSMUST00000121808
RefSeq Acc Id: ENSMUSP00000157017   ⟸   ENSMUST00000234194
RefSeq Acc Id: ENSMUSP00000157020   ⟸   ENSMUST00000234118
RefSeq Acc Id: XP_036017126   ⟸   XM_036161233
- Peptide Label: isoform X4
- UniProtKB: A0A3Q4EI24 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017129   ⟸   XM_036161236
- Peptide Label: isoform X8
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017128   ⟸   XM_036161235
- Peptide Label: isoform X8
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017130   ⟸   XM_036161237
- Peptide Label: isoform X8
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017131   ⟸   XM_036161238
- Peptide Label: isoform X8
- UniProtKB: Q3UZK3 (UniProtKB/TrEMBL)
Protein Domains
PH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91XL9-F1-model_v2 AlphaFold Q91XL9 1-950 view protein structure

Promoters
RGD ID:13677138
Promoter ID:EPDNEW_M22718
Type:initiation region
Name:Osbpl1a_3
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22719  EPDNEW_M22720  EPDNEW_M22721  EPDNEW_M22722  EPDNEW_M22723  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,819,756 - 12,819,816EPDNEW
RGD ID:13677140
Promoter ID:EPDNEW_M22719
Type:multiple initiation site
Name:Osbpl1a_4
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22720  EPDNEW_M22721  EPDNEW_M22722  EPDNEW_M22723  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,860,149 - 12,860,209EPDNEW
RGD ID:13677142
Promoter ID:EPDNEW_M22720
Type:initiation region
Name:Osbpl1a_2
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22719  EPDNEW_M22721  EPDNEW_M22722  EPDNEW_M22723  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,862,683 - 12,862,743EPDNEW
RGD ID:13677144
Promoter ID:EPDNEW_M22721
Type:initiation region
Name:Osbpl1a_6
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22719  EPDNEW_M22720  EPDNEW_M22722  EPDNEW_M22723  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,863,383 - 12,863,443EPDNEW
RGD ID:13677146
Promoter ID:EPDNEW_M22722
Type:multiple initiation site
Name:Osbpl1a_7
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22719  EPDNEW_M22720  EPDNEW_M22721  EPDNEW_M22723  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,889,084 - 12,889,144EPDNEW
RGD ID:6829425
Promoter ID:MM_KWN:24632
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000074704
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361812,926,366 - 12,926,866 (-)MPROMDB
RGD ID:13677148
Promoter ID:EPDNEW_M22723
Type:single initiation site
Name:Osbpl1a_5
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22719  EPDNEW_M22720  EPDNEW_M22721  EPDNEW_M22722  EPDNEW_M22724  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,941,227 - 12,941,287EPDNEW
RGD ID:13677150
Promoter ID:EPDNEW_M22724
Type:initiation region
Name:Osbpl1a_1
Description:Mus musculus oxysterol binding protein-like 1A , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22718  EPDNEW_M22719  EPDNEW_M22720  EPDNEW_M22721  EPDNEW_M22722  EPDNEW_M22723  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381812,941,793 - 12,941,853EPDNEW
RGD ID:6829421
Promoter ID:MM_KWN:24633
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Liver
Transcripts:ENSMUST00000119043
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361812,978,076 - 12,979,227 (-)MPROMDB
RGD ID:6829426
Promoter ID:MM_KWN:24634
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver
Transcripts:OTTMUST00000074702,   UC008ECW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361813,018,521 - 13,019,702 (-)MPROMDB
RGD ID:6829422
Promoter ID:MM_KWN:24635
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000117361,   ENSMUST00000118313,   ENSMUST00000121774,   ENSMUST00000121808,   OTTMUST00000074701,   UC008ECP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361813,020,731 - 13,022,032 (-)MPROMDB
RGD ID:6829424
Promoter ID:MM_KWN:24636
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver
Transcripts:OTTMUST00000074700
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361813,027,501 - 13,028,001 (-)MPROMDB
RGD ID:6829428
Promoter ID:MM_KWN:24640
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000122175,   OTTMUST00000074687,   OTTMUST00000074694,   OTTMUST00000074697,   OTTMUST00000074698,   OTTMUST00000074699,   UC008ECY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361813,099,864 - 13,100,364 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1927551 AgrOrtholog
Ensembl Genes ENSMUSG00000044252 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000074352 ENTREZGENE
  ENSMUST00000074352.11 UniProtKB/Swiss-Prot
  ENSMUST00000117361 ENTREZGENE
  ENSMUST00000117361.8 UniProtKB/Swiss-Prot
  ENSMUST00000118313 ENTREZGENE
  ENSMUST00000118313.8 UniProtKB/Swiss-Prot
  ENSMUST00000119043.8 UniProtKB/Swiss-Prot
  ENSMUST00000119512 ENTREZGENE
  ENSMUST00000119512.8 UniProtKB/TrEMBL
  ENSMUST00000121774 ENTREZGENE
  ENSMUST00000121774.8 UniProtKB/Swiss-Prot
  ENSMUST00000121808 ENTREZGENE
  ENSMUST00000121808.8 UniProtKB/Swiss-Prot
  ENSMUST00000121888 ENTREZGENE
  ENSMUST00000121888.8 UniProtKB/Swiss-Prot
  ENSMUST00000122175.8 UniProtKB/TrEMBL
  ENSMUST00000124570.3 UniProtKB/TrEMBL
  ENSMUST00000142467.2 UniProtKB/TrEMBL
  ENSMUST00000143077.8 UniProtKB/TrEMBL
  ENSMUST00000147197.2 UniProtKB/TrEMBL
  ENSMUST00000155650.3 UniProtKB/TrEMBL
  ENSMUST00000234118 ENTREZGENE
  ENSMUST00000234118.2 UniProtKB/TrEMBL
  ENSMUST00000234194.2 UniProtKB/Swiss-Prot
  ENSMUST00000234427.2 UniProtKB/TrEMBL
  ENSMUST00000234428 ENTREZGENE
  ENSMUST00000234428.2 UniProtKB/TrEMBL
  ENSMUST00000234871 ENTREZGENE
  ENSMUST00000234871.2 UniProtKB/Swiss-Prot
  ENSMUST00000235027 ENTREZGENE
  ENSMUST00000235027.2 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.40.160.120 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.70.3490 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OSBP_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oxysterol-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oxysterol-bd_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot
KEGG Report mmu:64291 UniProtKB/Swiss-Prot
MGD MGI:1927551 ENTREZGENE
NCBI Gene 64291 ENTREZGENE
PANTHER ANKYRIN REPEAT FAMILY PROTEIN UniProtKB/TrEMBL
  DIEGO, ISOFORM A UniProtKB/TrEMBL
  OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10972 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oxysterol_BP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Osbpl1a PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OSBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF144000 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3Q4EG41_MOUSE UniProtKB/TrEMBL
  A0A3Q4EG54 ENTREZGENE, UniProtKB/TrEMBL
  A0A3Q4EI24 ENTREZGENE, UniProtKB/TrEMBL
  A0A3Q4L2S6_MOUSE UniProtKB/TrEMBL
  A0A3Q4L372_MOUSE UniProtKB/TrEMBL
  D3YZ66_MOUSE UniProtKB/TrEMBL
  D3Z754_MOUSE UniProtKB/TrEMBL
  D3Z7I9_MOUSE UniProtKB/TrEMBL
  D6RDE4_MOUSE UniProtKB/TrEMBL
  O88318 ENTREZGENE
  OSBL1_MOUSE UniProtKB/Swiss-Prot
  Q3TH97 ENTREZGENE
  Q3UZK3 ENTREZGENE, UniProtKB/TrEMBL
  Q3V156 ENTREZGENE, UniProtKB/TrEMBL
  Q673L8 ENTREZGENE
  Q6DFU6 ENTREZGENE
  Q6PG70_MOUSE UniProtKB/TrEMBL
  Q8BTJ6_MOUSE UniProtKB/TrEMBL
  Q8K2D2_MOUSE UniProtKB/TrEMBL
  Q91XL9 ENTREZGENE
UniProt Secondary O88318 UniProtKB/Swiss-Prot
  Q3TH97 UniProtKB/Swiss-Prot
  Q673L8 UniProtKB/Swiss-Prot
  Q6DFU6 UniProtKB/Swiss-Prot