Gm7497 (predicted gene 7497) - Rat Genome Database

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Gene: Gm7497 (predicted gene 7497) Mus musculus
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Symbol: Gm7497
Name: predicted gene 7497
RGD ID: 2295749
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG665111
Related Functional Gene: Gapdh  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39189,748,704 - 9,749,925 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl189,748,732 - 9,749,724 (+)EnsemblGRCm39 Ensembl
GRCm38189,748,704 - 9,749,925 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl189,748,732 - 9,749,724 (+)EnsemblGRCm38mm10GRCm38
MGSCv37189,748,670 - 9,749,923 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36189,748,720 - 9,749,722 (+)NCBIMGSCv36mm8
Celera189,777,985 - 9,779,238 (+)NCBICelera
Cytogenetic Map18A1NCBI
cM Map184.91NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7497
67 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:176
Interacting mature miRNAs:180
Transcripts:ENSMUST00000183064
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142127Rafaril_mRafar interacting locus (mouse)Not determined18123108555Mouse
14928307Manh83_mmandible shape 83 (mouse)18126902168Mouse
12801458Intmrm3_mintima/media ratio modifier 3 (mouse)18131720756Mouse
11354953Mom21_mmodifier of Min 21 (mouse)18128893823Mouse
12801462Intim3_mintima modifier 3 (mouse)18131720756Mouse
4142250Idd21.3_minsulin dependent diabetes susceptibility 21.3 (mouse)Not determined18610840421646477Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
13207585Mwmlpt3_mMorris water maze latency to platform, training, 3 (mouse)18133547739Mouse
13207589Mwmlpa3_mMorris water maze latency to platform, all, 3 (mouse)18133547739Mouse
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060933072Mouse
1558873Hrtfm7_mheart failure modifier 7 (mouse)Not determined18808696442087106Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_007897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000183064
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl189,748,732 - 9,749,724 (+)Ensembl
GRCm38.p6 Ensembl189,748,732 - 9,749,724 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000098235 Ensembl, ENTREZGENE
MGD MGI:3646548 ENTREZGENE
NCBI Gene 665111 ENTREZGENE
PhenoGen Gm7497 PhenoGen