Gm7464 (predicted gene 7464) - Rat Genome Database

Name: Gm7464
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Gm7464 (predicted gene 7464) Mus musculus

Analyze

Symbol:

Gm7464

Name:

predicted gene 7464

RGD ID:

2295818

MGI Page

MGI

Description:

Type:

pseudo (Ensembl: processed_pseudogene)

RefSeq Status:

INFERRED

Previously known as:

EG665047

Related Functional Gene:

Chmp3

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	6,557,034 - 6,557,996 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	6,557,130 - 6,557,796 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	6,557,034 - 6,557,996 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	6,557,130 - 6,557,796 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	6,557,128 - 6,557,794 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	6,557,054 - 6,557,797 (+)	NCBI		MGSCv36	mm8
Celera	18	6,604,716 - 6,605,382 (+)	NCBI		Celera
Cytogenetic Map	18	A1	NCBI
cM Map	18	4.52	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in Gm7464
36 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142127	Rafaril_m	Rafar interacting locus (mouse)			Not determined		18	1	23108555	Mouse
14928307	Manh83_m	mandible shape 83 (mouse)					18	1	26902168	Mouse
11354953	Mom21_m	modifier of Min 21 (mouse)					18	1	28893823	Mouse
12801462	Intim3_m	intima modifier 3 (mouse)					18	1	31720756	Mouse
12801458	Intmrm3_m	intima/media ratio modifier 3 (mouse)					18	1	31720756	Mouse
13207585	Mwmlpt3_m	Morris water maze latency to platform, training, 3 (mouse)					18	1	33547739	Mouse
13207589	Mwmlpa3_m	Morris water maze latency to platform, all, 3 (mouse)					18	1	33547739	Mouse
27226723	Tibw9_m	tibia width 9, proximal, 16 week (mouse)					18	3200000	60933072	Mouse
1558849	W3q15_m	weight 3 weeks QTL 15 (mouse)			Not determined		18	5041119	61272643	Mouse
4142250	Idd21.3_m	insulin dependent diabetes susceptibility 21.3 (mouse)			Not determined		18	6108404	21646477	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_020118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000234402

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	6,557,130 - 6,557,796 (+)	Ensembl
GRCm38.p6 Ensembl	18	6,557,130 - 6,557,796 (+)	Ensembl

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000117425	Ensembl
MGD	MGI:3645335	ENTREZGENE
NCBI Gene	665047	ENTREZGENE
PhenoGen	Gm7464	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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