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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:kidney cortex cyst
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Accession:MP:0000522 term browser browse the term
Definition:presence of one or more abnormal membranous sacs in the kidney cortex
Synonyms:exact_synonym: cystic kidney cortex;   cystic renal cortex;   cysts in kidney cortex;   kidney cortex cysts;   renal cortex cyst;   renal cortex cysts;   renal cortical cyst;   renal cortical cysts


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kidney cortex cyst term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 IAGP MGI PMID:16107722 NCBI chr 7:97,375,586...97,387,454
Ensembl chr 7:97,373,213...97,387,496 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 IAGP MGI PMID:26859289 NCBI chr 7:16,228,398...16,349,313
Ensembl chr 7:16,227,644...16,348,918 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B IAGP MGI PMID:27153923 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Atp6ap2 ATPase, H+ transporting, lysosomal accessory protein 2 IAGP MGI PMID:26658320 NCBI chr  X:12,453,998...12,483,290
Ensembl chr  X:12,454,040...12,483,288 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:7840250 PMID:8760259 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bdkrb2 bradykinin receptor, beta 2 IAGP MGI PMID:11015607 NCBI chr12:105,529,431...105,561,503
Ensembl chr12:105,529,485...105,561,496 		JBrowse link
G Bicc1 BicC family RNA binding protein 1 IAGP MGI PMID:8887273 NCBI chr10:70,758,660...70,995,581
Ensembl chr10:70,758,662...70,995,530 		JBrowse link
G Cdkn2c cyclin dependent kinase inhibitor 2C IAGP MGI PMID:10880462 NCBI chr 4:109,518,073...109,523,953
Ensembl chr 4:109,518,073...109,524,386 		JBrowse link
G Cep290 centrosomal protein 290 IAGP MGI PMID:24946806 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702 		JBrowse link
G Chrna3 cholinergic receptor, nicotinic, alpha polypeptide 3 IAGP MGI PMID:10318955 NCBI chr 9:54,917,401...54,933,846
Ensembl chr 9:54,917,395...54,933,846 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 IAGP MGI PMID:17460146 PMID:22488641 NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021 		JBrowse link
G Ctnnd1 catenin delta 1 IAGP MGI PMID:21521738 NCBI chr 2:84,417,440...84,489,321
Ensembl chr 2:84,430,415...84,481,109
Ensembl chr 2:84,430,415...84,481,109 		JBrowse link
G Cys1 cystin 1 IAGP MGI PMID:11004214 PMID:17148658 NCBI chr12:24,715,832...24,731,794
Ensembl chr12:24,715,832...24,731,812 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III IAGP MGI PMID:25799508 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dzip1l DAZ interacting protein 1-like IAGP MGI PMID:28530676 NCBI chr 9:99,511,448...99,552,128
Ensembl chr 9:99,511,549...99,551,309 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 IAGP MGI PMID:15838507 NCBI chr 5:96,518,622...96,932,592
Ensembl chr 5:96,521,814...96,932,587 		JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 IAGP MGI PMID:15838507 NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776 		JBrowse link
G Fryl FRY like transcription coactivator IAGP MGI PMID:29409347 NCBI chr 5:73,177,534...73,414,042
Ensembl chr 5:73,177,330...73,413,962 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor IAGP MGI PMID:12574104 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Glis2 GLIS family zinc finger 2 IAGP MGI PMID:17618285 NCBI chr16:4,412,217...4,443,076
Ensembl chr16:4,412,577...4,442,788 		JBrowse link
G Glis3 GLIS family zinc finger 3 IAGP MGI PMID:19481545 NCBI chr19:28,236,251...28,657,684
Ensembl chr19:28,236,251...28,657,477 		JBrowse link
G Gpc3 glypican 3 IAGP MGI PMID:11846487 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Ift140 intraflagellar transport 140 IAGP MGI PMID:22282595 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E IAGP MGI PMID:19668215 NCBI chr 2:26,286,261...26,299,313
Ensembl chr 2:26,286,261...26,299,215 		JBrowse link
G Invs inversin IAGP MGI PMID:15213262 NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954 		JBrowse link
G Kif3a kinesin family member 3A IAGP MGI PMID:12672950 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 IAGP MGI PMID:17148658 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617 		JBrowse link
G Mafb MAF bZIP transcription factor B IAGP MGI PMID:16847325 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
G Mef2c myocyte enhancer factor 2C IAGP MGI PMID:20181743 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 IAGP MGI PMID:19776033 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Nek1 NIMA (never in mitosis gene a)-related expressed kinase 1 IAGP MGI PMID:9070925 PMID:10589692 NCBI chr 8:61,446,184...61,584,383
Ensembl chr 8:61,446,229...61,584,380 		JBrowse link
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 IAGP MGI PMID:8510385 PMID:12405636 NCBI chr11:78,056,932...78,067,501
Ensembl chr11:78,056,932...78,067,501 		JBrowse link
G Nphs1 nephrosis 1, nephrin IAGP MGI PMID:11136707 NCBI chr 7:30,157,259...30,188,048
Ensembl chr 7:30,157,740...30,186,648 		JBrowse link
G Ovol1 ovo like zinc finger 1 IAGP MGI PMID:9808631 NCBI chr19:5,599,165...5,610,603
Ensembl chr19:5,599,164...5,610,674 		JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:25799508 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pcnt pericentrin (kendrin) IAGP MGI PMID:25220058 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Pde1a phosphodiesterase 1A, calmodulin-dependent IAGP MGI PMID:28750036 NCBI chr 2:79,664,797...80,026,862
Ensembl chr 2:79,664,797...79,959,802 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting IAGP MGI PMID:9326937 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel IAGP MGI PMID:9568711 PMID:10615132 PMID:12062060 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:18497742 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IAGP MGI PMID:11115063 NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978 		JBrowse link
G Sdccag8 serologically defined colon cancer antigen 8 IAGP MGI PMID:24722439 PMID:35503560 NCBI chr 1:176,642,226...176,848,004
Ensembl chr 1:176,642,226...176,848,003 		JBrowse link
G Slc2a9 solute carrier family 2 (facilitated glucose transporter), member 9 IAGP MGI PMID:19706426 NCBI chr 5:38,506,616...38,660,488
Ensembl chr 5:38,506,616...38,660,486 		JBrowse link
G Tmem218 transmembrane protein 218 IAGP MGI PMID:25161209 NCBI chr 9:37,119,519...37,134,524
Ensembl chr 9:37,119,519...37,135,996 		JBrowse link
G Tns1 tensin 1 IAGP MGI PMID:9087448 NCBI chr 1:73,949,391...74,163,707
Ensembl chr 1:73,949,390...74,163,608 		JBrowse link
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 IAGP MGI PMID:22203997 NCBI chr 2:126,633,478...126,718,181
Ensembl chr 2:126,633,485...126,718,150 		JBrowse link
G Uox urate oxidase IAGP MGI PMID:8290593 NCBI chr 3:146,302,904...146,337,238
Ensembl chr 3:146,276,181...146,338,060 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:18497742 PMID:19252526 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Wt1 WT1 transcription factor IAGP MGI PMID:18040647 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 IAGP MGI PMID:17636028 NCBI chr 3:57,363,065...57,483,331
Ensembl chr 3:57,363,070...57,483,331 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16738
    growth/size/body region phenotype 6944
      abnormal cyst 388
        kidney cyst 228
          kidney cortex cyst 50
Path 2
Term Annotations click to browse term
  mammalian phenotype 16738
    renal/urinary system phenotype 2078
      abnormal renal/urinary system morphology 1730
        abnormal kidney morphology 1546
          abnormal kidney cortex morphology 480
            kidney cortex cyst 50
paths to the root