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ONTOLOGY REPORT - ANNOTATIONS

Term:T-tubule
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Accession:GO:0030315 term browser browse the term
Definition:Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.
Synonyms:exact_synonym: transverse tubule
 related_synonym: triad
 xref: Wikipedia:T-tubule

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show annotations for term's descendants           Sort by:
T-tubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 ISO RGD PMID:15647111 RGD:1598637 NCBI chrNW_004955413:17,385,966...17,510,220
Ensembl chrNW_004955413:17,382,564...17,510,132 		JBrowse link
G Adra1a adrenoceptor alpha 1A ISO RGD PMID:18467629 RGD:5688343 NCBI chrNW_004955403:49,394,173...49,485,881
Ensembl chrNW_004955403:49,399,127...49,485,934 		JBrowse link
G Adra1b adrenoceptor alpha 1B ISO RGD PMID:18467629 RGD:5688343 NCBI chrNW_004955408:13,883,574...13,937,798
Ensembl chrNW_004955408:13,883,574...13,937,709 		JBrowse link
G Akap6 A-kinase anchoring protein 6 located_in ISO PMID:9679148 BHF-UCL PMID:9679148 RGD:8553491 NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944 		JBrowse link
G Akap7 A-kinase anchoring protein 7 ISO RGD PMID:14569017 RGD:1304018 NCBI chrNW_004955436:11,883,840...12,002,668
Ensembl chrNW_004955436:11,884,433...12,004,013 		JBrowse link
G Ank2 ankyrin 2 located_in ISO (MGI:2449848|PMID:12571597), (MGI:3610760|PMID:16292983) BHF-UCL PMID:12571597 PMID:16292983 MGI:2449848 MGI:3610760 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261 		JBrowse link
G Ank3 ankyrin 3 located_in ISO PMID:15579534 BHF-UCL PMID:15579534 RGD:6484228 NCBI chrNW_004955425:13,522,233...13,851,286 JBrowse link
G Aqp4 aquaporin 4 ISO RGD PMID:20849844 RGD:5490121 NCBI chrNW_004955772:1,160...10,709
Ensembl chrNW_004955772:1,159...10,709 		JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 located_in ISO (PMID:19751721)
(MGI:3610760|PMID:16292983)
PMID:17442282		 ARUK-UCL
BHF-UCL		 PMID:16292983 PMID:17442282 PMID:19751721 MGI:3610760 RGD:6903343 NCBI chrNW_004955435:19,537,224...19,563,631
Ensembl chrNW_004955435:19,536,634...19,564,580 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 located_in ISO (MGI:3610760|PMID:16292983)
PMID:17442282
(PMID:19751721)		 RGD
BHF-UCL
ARUK-UCL		 PMID:16292983 PMID:17442282 PMID:19751721 MGI:3610760 RGD:6903343 NCBI chrNW_004955468:11,898,786...11,924,341
Ensembl chrNW_004955468:11,898,915...11,922,400 		JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 located_in ISO (PMID:19751721) ARUK-UCL PMID:19751721 NCBI chrNW_004955462:8,072,519...8,095,311
Ensembl chrNW_004955462:8,073,679...8,094,880 		JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 located_in ISO (PMID:19287093)
(MGI:3848765|PMID:19287093)		 BHF-UCL PMID:19287093 MGI:3848765 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694 		JBrowse link
G Bin1 bridging integrator 1 located_in ISO PMID:9182667
(MGI:5583915|PMID:24836577)		 Alzheimers_University_of_Toronto
ARUK-UCL		 PMID:9182667 PMID:24836577 MGI:5583915 RGD:8553847 NCBI chrNW_004955459:3,376,149...3,423,157
Ensembl chrNW_004955459:3,399,611...3,422,621 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C located_in ISO (PMID:22355118) RGD
MGI		 PMID:14569017 PMID:22355118 RGD:1304018 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S located_in ISO (PMID:17204937)
(PMID:10444070), (PMID:15536090), (PMID:26078055), (PMID:8943043)
(PMID:28012042)		 UniProt
MGI		 PMID:8943043 PMID:10444070 PMID:15536090 PMID:17204937 PMID:26078055 More... NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 located_in ISO (PMID:15536090) MGI PMID:15536090 NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239 		JBrowse link
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 located_in ISO (PMID:26078055), (PMID:8943043) MGI PMID:8943043 PMID:26078055 NCBI chrNW_004955451:14,041,848...14,059,740
Ensembl chrNW_004955451:14,038,668...14,059,848 		JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta located_in ISO (PMID:15652482) MGI PMID:15652482 NCBI chrNW_004955428:25,583,501...25,880,395 JBrowse link
G Capn3 calpain 3 located_in ISO PMID:19144634 UniProt PMID:19144634 RGD:8553509 NCBI chrNW_004955416:9,070,479...9,121,099
Ensembl chrNW_004955416:9,070,399...9,117,794 		JBrowse link
G Casq1 calsequestrin 1 ISO RGD PMID:11010809 RGD:2313244 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836 		JBrowse link
G Cav3 caveolin 3 located_in ISO (PMID:16319126), (PMID:9008709)
PMID:9925767		 RGD
MGI		 PMID:9008709 PMID:9925767 PMID:16319126 PMID:16501018 RGD:1599531 RGD:8553487 NCBI chrNW_004955561:326,008...335,911
Ensembl chrNW_004955561:325,944...335,914 		JBrowse link
G Cdh2 cadherin 2 located_in ISO PMID:15579534 BHF-UCL PMID:15579534 RGD:6484228 NCBI chrNW_004955402:15,829,895...16,049,874
Ensembl chrNW_004955402:15,831,110...16,049,890 		JBrowse link
G Cltc clathrin heavy chain ISO RGD PMID:7536412 RGD:2303181 NCBI chrNW_004955451:3,380,304...3,445,973
Ensembl chrNW_004955451:3,380,304...3,445,973 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO RGD PMID:11181181 RGD:1581466 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dysf dysferlin located_in ISO (PMID:17185750)
(PMID:16319126), (PMID:24302765), (PMID:24784578)		 UniProt
MGI		 PMID:16319126 PMID:17185750 PMID:24302765 PMID:24784578 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436 		JBrowse link
G Ednra endothelin receptor type A ISO RGD PMID:12972433 RGD:1581834 NCBI chrNW_004955428:3,062,303...3,114,761
Ensembl chrNW_004955428:3,062,303...3,114,761 		JBrowse link
G Esr1 estrogen receptor 1 ISO RGD PMID:16876190 RGD:1601102 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353 		JBrowse link
G Ezr ezrin ISO RGD PMID:19028724 RGD:7207798 NCBI chrNW_004955439:3,701,722...3,740,345
Ensembl chrNW_004955439:3,703,013...3,740,345 		JBrowse link
G Fxyd1 FXYD domain containing ion transport regulator 1 located_in ISO PMID:23532852 UniProt PMID:23532852 RGD:9685469 NCBI chrNW_004955468:4,456,909...4,460,895
Ensembl chrNW_004955468:4,457,985...4,460,528 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:23743348 RGD:11041118 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113 		JBrowse link
G Igf1r insulin like growth factor 1 receptor located_in ISO (PMID:23695157) RGD
MGI		 PMID:23118311 PMID:23695157 RGD:10046017 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 located_in ISO PMID:10860776 UniProt PMID:10860776 RGD:10047321 NCBI chrNW_004955479:2,062,607...2,545,576
Ensembl chrNW_004955479:2,062,608...2,543,125 		JBrowse link
G Kcnj11 potassium inwardly rectifying channel subfamily J member 11 located_in ISO (PMID:20610380) RGD
MGI		 PMID:15647111 PMID:20610380 RGD:1598637 NCBI chrNW_004955414:32,209,426...32,212,424
Ensembl chrNW_004955414:32,210,545...32,211,717 		JBrowse link
G Kcnj12 potassium inwardly rectifying channel subfamily J member 12 ISO RGD PMID:11181181 RGD:1581466 NCBI chrNW_004955577:1,348,350...1,359,300 JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:23640888 RGD:7247427 NCBI chrNW_004955478:2,734,795...2,745,217
Ensembl chrNW_004955478:2,734,795...2,745,217 		JBrowse link
G Kcnj3 potassium inwardly rectifying channel subfamily J member 3 ISO RGD PMID:11561006 RGD:1581474 NCBI chrNW_004955440:19,716,081...19,836,957
Ensembl chrNW_004955440:19,716,081...19,833,437 		JBrowse link
G Kcnj5 potassium inwardly rectifying channel subfamily J member 5 ISO RGD PMID:11561006 RGD:1581474 NCBI chrNW_004955412:29,850,097...29,874,213
Ensembl chrNW_004955412:29,850,097...29,874,213 		JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 located_in ISO (MGI:3771286|PMID:17110593) BHF-UCL PMID:17110593 MGI:3771286 NCBI chrNW_004955408:34,223,523...34,366,191
Ensembl chrNW_004955408:34,109,334...34,368,114 		JBrowse link
G Msn moesin ISO RGD PMID:19028724 RGD:7207798 NCBI chrNW_004955475:5,301,856...5,370,378
Ensembl chrNW_004955475:5,301,910...5,370,691 		JBrowse link
G Nos1 nitric oxide synthase 1 located_in ISO (MGI:5613473|PMID:19800018) BHF-UCL PMID:19800018 MGI:5613473 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566 		JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:26365878 RGD:401900132 NCBI chrNW_004955454:12,741,577...12,751,282
Ensembl chrNW_004955454:12,744,765...12,752,226 		JBrowse link
G Oprm1 opioid receptor mu 1 located_in ISO RGD PMID:26686371 RGD:401831050 NCBI chrNW_004955439:7,870,563...7,923,817
Ensembl chrNW_004955439:7,757,569...7,923,817 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta located_in ISO (MGI:3848765|PMID:19287093) BHF-UCL PMID:19287093 MGI:3848765 NCBI chrNW_004955437:18,323,852...18,377,815
Ensembl chrNW_004955437:18,323,857...18,377,815 		JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ISO RGD PMID:14569017 RGD:1304018 NCBI chrNW_004955532:827,112...896,487
Ensembl chrNW_004955532:827,418...852,845 		JBrowse link
G Prkce protein kinase C epsilon ISO RGD PMID:19525381 RGD:2317914 NCBI chrNW_004955441:12,642,703...13,142,396
Ensembl chrNW_004955441:12,642,697...13,139,372 		JBrowse link
G Rdx radixin ISO RGD PMID:19028724 RGD:7207798 NCBI chrNW_004955412:12,100,436...12,184,444
Ensembl chrNW_004955412:12,100,359...12,172,545 		JBrowse link
G Rem1 RRAD and GEM like GTPase 1 located_in ISO (PMID:26078055) MGI PMID:26078055 NCBI chrNW_004955422:29,434,477...29,443,172
Ensembl chrNW_004955422:29,429,908...29,443,273 		JBrowse link
G Rrad RRAD, Ras related glycolysis inhibitor and calcium channel regulator located_in ISO (PMID:26078055) MGI PMID:26078055 NCBI chrNW_004955433:23,426,258...23,439,094
Ensembl chrNW_004955433:23,426,643...23,438,923 		JBrowse link
G Rtn2 reticulon 2 located_in ISO (PMID:19720795) MGI PMID:19720795 NCBI chrNW_004955574:1,543...11,476
Ensembl chrNW_004955574:1,071...21,117 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in ISO (PMID:15536090), (PMID:22355118), (PMID:23695157), (PMID:8943043) MGI PMID:8943043 PMID:15536090 PMID:22355118 PMID:23695157 NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036 		JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 located_in ISO (PMID:15746173) MGI PMID:15746173 NCBI chrNW_004955449:8,072,910...8,220,763
Ensembl chrNW_004955449:8,160,986...8,221,951 		JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 located_in ISO (PMID:15272007), (PMID:18178574) MGI PMID:15272007 PMID:18178574 NCBI chrNW_004955468:4,375,517...4,383,383
Ensembl chrNW_004955468:4,375,157...4,383,502 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 located_in ISO (PMID:15746173) MGI PMID:15746173 NCBI chrNW_004955449:8,722,043...8,846,165
Ensembl chrNW_004955449:8,721,784...8,846,200 		JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 is_active_in
located_in		 ISO (PMID:27932425) MGI PMID:27932425 NCBI chrNW_004955412:19,341,008...19,353,563
Ensembl chrNW_004955412:19,340,947...19,354,062 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 located_in ISO (PMID:15746173), (PMID:18178574)
PMID:15579534
(PMID:15579534)		 RGD
MGI
BHF-UCL		 PMID:15579534 PMID:15746173 PMID:18178574 RGD:6484228 NCBI chrNW_004955427:25,295,517...25,371,419
Ensembl chrNW_004955427:25,295,514...25,371,552 		JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004955467:9,630,304...9,636,005
Ensembl chrNW_004955467:9,630,304...9,636,005 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 located_in ISO PMID:16741752 BHF-UCL PMID:16741752 RGD:8554228 NCBI chrNW_004955406:5,662,312...5,668,331
Ensembl chrNW_004955406:5,639,341...5,668,331 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 located_in ISO (MGI:3610760|PMID:16292983), (PMID:15652482), (PMID:22355118)
PMID:1514597		 RGD
MGI
BHF-UCL		 PMID:1514597 PMID:11121386 PMID:15652482 PMID:16292983 PMID:22355118 MGI:3610760 RGD:2316982 RGD:8553384 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chrNW_004955452:6,409,833...6,467,841
Ensembl chrNW_004955452:6,409,833...6,467,841 		JBrowse link
G Sri sorcin ISO RGD PMID:16931553 RGD:7327199 NCBI chrNW_004955432:5,541,311...5,559,781
Ensembl chrNW_004955432:5,541,311...5,560,294 		JBrowse link
G Stac SH3 and cysteine rich domain located_in ISO (PMID:23818578) MGI PMID:23818578 NCBI chrNW_004955421:3,325,199...3,471,748
Ensembl chrNW_004955421:3,325,199...3,471,742 		JBrowse link
G Stbd1 starch binding domain 1 located_in ISO (PMID:9794794) ParkinsonsUK-UCL PMID:9794794 NCBI chrNW_004955433:1,036,265...1,038,652 JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO RGD PMID:9281452 RGD:1625705 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180 		JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:20015453 RGD:4889912 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048 		JBrowse link
L-type voltage-gated calcium channel complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C part_of ISO PMID:15170217
(PMID:15454078)		 UniProt
BHF-UCL		 PMID:15170217 PMID:15454078 RGD:11558004 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506 		JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D part_of ISO (PMID:1309651) BHF-UCL PMID:1309651 NCBI chrNW_004955430:3,450,151...3,796,983
Ensembl chrNW_004955430:3,268,953...3,794,592 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 part_of ISO (PMID:1309651)
PMID:25527503		 BHF-UCL PMID:1309651 PMID:25527503 RGD:11059598 NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239 		JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 part_of ISO (PMID:1309651)
PMID:26680202		 BHF-UCL
UniProt		 PMID:1309651 PMID:26680202 RGD:12907551 NCBI chrNW_004955429:9,642,725...9,966,175
Ensembl chrNW_004955429:9,644,053...9,966,175 		JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 part_of ISO PMID:25527503
PMID:10666413
PMID:15170217		 BHF-UCL
UniProt		 PMID:10666413 PMID:15170217 PMID:25527503 RGD:11059598 RGD:11558004 RGD:13673808 NCBI chrNW_004955500:7,676,331...7,685,174
Ensembl chrNW_004955500:7,672,828...7,687,420 		JBrowse link
G Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 part_of ISO PMID:9049149 UniProt PMID:9049149 RGD:69791 NCBI chrNW_004955478:6,295,046...6,305,625
Ensembl chrNW_004955478:6,294,974...6,305,669 		JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 part_of ISO (PMID:21127204) UniProt PMID:21127204 NCBI chrNW_004955478:6,219,637...6,278,759
Ensembl chrNW_004955478:6,219,631...6,280,169 		JBrowse link
G Cacng6 calcium voltage-gated channel auxiliary subunit gamma 6 part_of ISO (PMID:21127204) UniProt PMID:21127204 NCBI chrNW_004955604:189,261...205,058
Ensembl chrNW_004955604:185,430...205,088 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 part_of ISO (PMID:21127204) UniProt PMID:21127204 NCBI chrNW_004955604:242,627...260,594
Ensembl chrNW_004955604:241,170...260,594 		JBrowse link
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 part_of ISO (MGI:6164122|PMID:21127204) UniProt PMID:21127204 MGI:6164122 NCBI chrNW_004955604:204,482...221,833 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12560
    cellular anatomical entity 12403
      T-tubule 72
        L-type voltage-gated calcium channel complex 10
Path 2
Term Annotations click to browse term
  cellular_component 12560
    cellular anatomical entity 12403
      membrane 5051
        plasma membrane 3363
          sarcolemma 157
            T-tubule 72
              L-type voltage-gated calcium channel complex 10
paths to the root