Ank3 (ankyrin 3) - Rat Genome Database

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Gene: Ank3 (ankyrin 3) Chinchilla lanigera
Analyze
Symbol: Ank3
Name: ankyrin 3
RGD ID: 8824773
Description: ENCODES a protein that exhibits cadherin binding (ortholog); cytoskeletal protein binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bipolar disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ankyrin 3, node of Ranvier (ankyrin G); ankyrin-3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References


Genomics

Comparative Map Data
Ank3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBIChiLan1.0ChiLan1.0
ANK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1060,026,298 - 60,733,490 (-)EnsemblGRCh38hg38GRCh38
GRCh381060,026,298 - 60,733,528 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371061,786,056 - 62,493,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361061,458,165 - 61,819,494 (-)NCBINCBI36hg18NCBI36
Build 341061,458,164 - 61,819,494NCBI
Celera1055,053,717 - 55,415,045 (-)NCBI
Cytogenetic Map10q21.2NCBI
HuRef1055,773,261 - 56,482,641 (-)NCBIHuRef
CHM1_11062,067,860 - 62,775,531 (-)NCBICHM1_1
Ank3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391069,234,608 - 69,863,266 (+)NCBIGRCm39mm39
GRCm39 Ensembl1069,234,603 - 69,863,268 (+)Ensembl
GRCm381069,533,486 - 70,027,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1069,398,773 - 70,027,438 (+)EnsemblGRCm38mm10GRCm38
MGSCv371068,996,456 - 69,490,184 (+)NCBIGRCm37mm9NCBIm37
MGSCv361068,929,206 - 69,420,423 (+)NCBImm8
Celera1070,624,257 - 71,118,490 (+)NCBICelera
Cytogenetic Map10B5.3NCBI
cM Map1036.1NCBI
Ank3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22018,602,267 - 19,225,831 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl2018,602,786 - 19,086,300 (-)Ensembl
Rnor_6.02019,948,767 - 20,480,628 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2020,105,047 - 20,480,623 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02022,087,201 - 22,609,939 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42019,328,684 - 19,828,196 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12019,342,749 - 19,991,423 (-)NCBI
Celera2019,989,307 - 20,463,938 (-)NCBICelera
Cytogenetic Map20p11NCBI
ANK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11058,774,451 - 59,136,990 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1058,790,696 - 59,602,954 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01056,560,589 - 57,269,952 (-)NCBIMhudiblu_PPA_v0panPan3
ANK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1412,166,275 - 12,827,175 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl412,167,550 - 12,827,037 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha412,363,980 - 13,033,138 (-)NCBI
ROS_Cfam_1.0412,429,077 - 13,092,708 (-)NCBI
UMICH_Zoey_3.1412,405,705 - 12,731,679 (-)NCBI
UNSW_CanFamBas_1.0412,524,697 - 13,188,432 (-)NCBI
UU_Cfam_GSD_1.0412,836,070 - 13,499,460 (-)NCBI
Ank3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721368,578,618 - 68,890,049 (+)NCBI
SpeTri2.0NW_0049366142,664,594 - 2,976,174 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11463,416,154 - 63,809,220 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21468,392,391 - 68,782,101 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1970,549,665 - 71,253,928 (+)NCBI
ChlSab1.1 Ensembl970,893,260 - 71,254,245 (+)Ensembl
Vero_WHO_p1.0NW_02366604831,446,144 - 32,148,885 (+)NCBI
Ank3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247913,299,287 - 3,633,631 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013514807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013514825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01025538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01025544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBDJ01224829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013514807   ⟹   XP_013370261
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514808   ⟹   XP_013370262
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514809   ⟹   XP_013370263
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514810   ⟹   XP_013370264
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514811   ⟹   XP_013370265
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514812   ⟹   XP_013370266
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514813   ⟹   XP_013370267
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,286 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514814   ⟹   XP_013370268
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514815   ⟹   XP_013370269
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,135 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514816   ⟹   XP_013370270
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,108 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514817   ⟹   XP_013370271
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,108 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514818   ⟹   XP_013370272
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,107 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514819   ⟹   XP_013370273
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,107 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514820   ⟹   XP_013370274
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,100 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514821   ⟹   XP_013370275
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,100 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514822   ⟹   XP_013370276
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,107 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514823   ⟹   XP_013370277
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,105 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514824   ⟹   XP_013370278
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,851,105 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013514825   ⟹   XP_013370279
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542513,522,233 - 13,626,043 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_013370267   ⟸   XM_013514813
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_013370265   ⟸   XM_013514811
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013370264   ⟸   XM_013514810
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013370263   ⟸   XM_013514809
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013370268   ⟸   XM_013514814
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_013370266   ⟸   XM_013514812
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013370262   ⟸   XM_013514808
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013370261   ⟸   XM_013514807
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013370269   ⟸   XM_013514815
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_013370271   ⟸   XM_013514817
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_013370270   ⟸   XM_013514816
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_013370273   ⟸   XM_013514819
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_013370272   ⟸   XM_013514818
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_013370276   ⟸   XM_013514822
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_013370278   ⟸   XM_013514824
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_013370277   ⟸   XM_013514823
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_013370275   ⟸   XM_013514821
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_013370274   ⟸   XM_013514820
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_013370279   ⟸   XM_013514825
- Peptide Label: isoform X19
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017378 ENTREZGENE
Ensembl Protein ENSCLAP00000025297 ENTREZGENE
  ENSCLAP00000025298 ENTREZGENE
  ENSCLAP00000025299 ENTREZGENE
  ENSCLAP00000025300 ENTREZGENE
  ENSCLAP00000025301 ENTREZGENE
Ensembl Transcript ENSCLAT00000025544 ENTREZGENE
  ENSCLAT00000025545 ENTREZGENE
  ENSCLAT00000025546 ENTREZGENE
  ENSCLAT00000025547 ENTREZGENE
  ENSCLAT00000025548 ENTREZGENE
NCBI Gene Ank3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Ank3  ankyrin 3    ankyrin 3, node of Ranvier (ankyrin G)  Symbol and/or name change 5135510 APPROVED