Atp1a2 (ATPase Na+/K+ transporting subunit alpha 2) - Rat Genome Database

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Gene: Atp1a2 (ATPase Na+/K+ transporting subunit alpha 2) Chinchilla lanigera
Analyze
Symbol: Atp1a2
Name: ATPase Na+/K+ transporting subunit alpha 2
RGD ID: 8794119
Description: ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amygdala development (ortholog); ATP metabolic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 1 (ortholog); autoimmune interstitial lung, joint, and kidney disease (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cell surface (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATPase, Na+/K+ transporting, alpha 2 polypeptide; sodium/potassium-transporting ATPase subunit alpha-2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,898,915 - 11,922,400 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546811,898,786 - 11,924,341 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adult locomotory behavior  (ISO)
amygdala development  (ISO)
ATP metabolic process  (ISO)
behavioral fear response  (ISO)
blood circulation  (ISO)
cellular response to mechanical stimulus  (ISO)
cellular response to steroid hormone stimulus  (ISO)
fear response  (ISO)
intracellular potassium ion homeostasis  (ISO)
intracellular sodium ion homeostasis  (ISO)
L-ascorbic acid metabolic process  (ISO)
locomotion  (ISO)
locomotory exploration behavior  (ISO)
membrane depolarization  (ISO)
monoatomic cation transmembrane transport  (ISO)
negative regulation of calcium ion transmembrane transport  (ISO)
negative regulation of cytosolic calcium ion concentration  (ISO)
negative regulation of heart contraction  (ISO)
negative regulation of striated muscle contraction  (ISO)
neuronal action potential propagation  (ISO)
neurotransmitter uptake  (ISO)
olfactory cortex development  (ISO)
potassium ion import across plasma membrane  (ISO)
potassium ion transmembrane transport  (ISO)
potassium ion transport  (ISO)
proton transmembrane transport  (ISO)
regulation of blood pressure  (ISO)
regulation of cardiac muscle cell contraction  (ISO)
regulation of muscle contraction  (ISO)
regulation of respiratory gaseous exchange by nervous system process  (ISO)
regulation of smooth muscle contraction  (ISO)
regulation of striated muscle contraction  (ISO)
regulation of the force of heart contraction  (ISO)
regulation of vasoconstriction  (ISO)
response to auditory stimulus  (ISO)
response to glycoside  (ISO)
response to nicotine  (ISO)
response to potassium ion  (ISO)
sodium ion export across plasma membrane  (ISO)
sodium ion transmembrane transport  (ISO)
sodium ion transport  (ISO)
visual learning  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
alfentanil pharmacodynamics pathway  (ISO)
amiloride pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
bendroflumethiazide pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bumetanide pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
chlorothiazide pharmacodynamics pathway  (ISO)
chlorthalidone pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
cystinuria pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
eplerenone pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
etacrynic acid pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
furosemide pharmacodynamics pathway  (ISO)
Hartnup disease pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrochlorothiazide pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydroflumethiazide pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
iminoglycinuria pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
lactose degradation pathway  (ISO)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
lysinuric protein intolerance pathway  (ISO)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
metolazone pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
spironolactone pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
torasemide pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)
trehalose degradation pathway  (ISO)
triamterene pharmacodynamics pathway  (ISO)
trichlormethiazide pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Atp1a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,898,915 - 11,922,400 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546811,898,786 - 11,924,341 (+)NCBIChiLan1.0ChiLan1.0
ATP1A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381160,115,759 - 160,143,591 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1160,115,759 - 160,143,591 (+)EnsemblGRCh38hg38GRCh38
GRCh371160,085,549 - 160,113,381 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,352,172 - 158,380,005 (+)NCBINCBI36Build 36hg18NCBI36
Build 341156,898,620 - 156,926,445NCBI
Celera1133,154,306 - 133,182,156 (+)NCBICelera
Cytogenetic Map1q23.2NCBI
HuRef1131,442,647 - 131,470,507 (+)NCBIHuRef
CHM1_11161,480,881 - 161,508,729 (+)NCBICHM1_1
T2T-CHM13v2.01159,252,841 - 159,280,677 (+)NCBIT2T-CHM13v2.0
Atp1a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,099,276 - 172,125,631 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,099,276 - 172,125,631 (-)EnsemblGRCm39 Ensembl
GRCm381172,271,709 - 172,298,064 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,271,709 - 172,298,064 (-)EnsemblGRCm38mm10GRCm38
MGSCv371174,201,840 - 174,228,195 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361174,108,384 - 174,134,739 (-)NCBIMGSCv36mm8
Celera1175,123,792 - 175,151,771 (-)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.6NCBI
Atp1a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81387,261,964 - 87,286,911 (-)NCBIGRCr8
mRatBN7.21384,729,597 - 84,754,544 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1384,729,601 - 84,754,544 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1387,232,914 - 87,257,867 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01388,633,186 - 88,658,137 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01385,817,817 - 85,842,746 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01390,651,682 - 90,676,629 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1390,651,686 - 90,676,629 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01395,173,343 - 95,198,290 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41388,258,993 - 88,283,918 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11388,447,876 - 88,472,802 (-)NCBI
Celera1384,339,662 - 84,364,561 (-)NCBICelera
Cytogenetic Map13q24NCBI
ATP1A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2189,708,710 - 89,736,510 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1189,448,721 - 89,476,513 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01135,469,495 - 135,497,303 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11139,390,549 - 139,418,311 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1139,390,549 - 139,418,303 (+)Ensemblpanpan1.1panPan2
ATP1A4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13822,023,176 - 22,080,656 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3822,023,221 - 22,080,604 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3822,095,902 - 22,153,381 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03822,139,352 - 22,196,880 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3822,139,147 - 22,196,845 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13822,044,000 - 22,101,455 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03822,440,372 - 22,497,857 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03822,850,118 - 22,907,704 (-)NCBIUU_Cfam_GSD_1.0
Atp1a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050586,240,258 - 6,264,320 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936740488,154 - 514,308 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936740489,357 - 514,235 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP1A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl490,341,322 - 90,370,996 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1490,341,316 - 90,371,040 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2498,282,712 - 98,312,416 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP1A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1203,801,044 - 3,828,680 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl203,802,887 - 3,828,692 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660382,858,128 - 2,886,182 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000018855   ⟹   ENSCLAP00000018672
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495546811,898,915 - 11,922,400 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000018856   ⟹   ENSCLAP00000018673
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495546811,903,523 - 11,922,400 (+)Ensembl
RefSeq Acc Id: XM_005400194   ⟹   XP_005400251
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546811,898,786 - 11,924,341 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005400251 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000018672
  ENSCLAP00000018672.1
  ENSCLAP00000018673.1
RefSeq Acc Id: XP_005400251   ⟸   XM_005400194
- UniProtKB: A0A8C2VRU0 (UniProtKB/TrEMBL),   A0A8C2VUQ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000018673   ⟸   ENSCLAT00000018856
RefSeq Acc Id: ENSCLAP00000018672   ⟸   ENSCLAT00000018855

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012804 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000018855 ENTREZGENE
  ENSCLAT00000018855.1 UniProtKB/TrEMBL
  ENSCLAT00000018856.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1110.10 UniProtKB/TrEMBL
  3.40.50.1000 UniProtKB/TrEMBL
  Calcium-transporting ATPase, cytoplasmic transduction domain A UniProtKB/TrEMBL
  Calcium-transporting ATPase, transmembrane domain UniProtKB/TrEMBL
InterPro ATPase_P-typ_cation-transptr_C UniProtKB/TrEMBL
  ATPase_P-typ_cation-transptr_N UniProtKB/TrEMBL
  ATPase_P-typ_cyto_dom_N UniProtKB/TrEMBL
  ATPase_P-typ_P_site UniProtKB/TrEMBL
  ATPase_P-typ_TM_dom_sf UniProtKB/TrEMBL
  ATPase_P-typ_transduc_dom_A_sf UniProtKB/TrEMBL
  HAD-like_sf UniProtKB/TrEMBL
  HAD_sf UniProtKB/TrEMBL
  P-type_ATPase_IIC UniProtKB/TrEMBL
  P_typ_ATPase UniProtKB/TrEMBL
  P_typ_ATPase_HD_dom UniProtKB/TrEMBL
NCBI Gene Atp1a2 ENTREZGENE
PANTHER SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA UniProtKB/TrEMBL
  SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA-2 UniProtKB/TrEMBL
Pfam Cation_ATPase UniProtKB/TrEMBL
  Cation_ATPase_C UniProtKB/TrEMBL
  Cation_ATPase_N UniProtKB/TrEMBL
  E1-E2_ATPase UniProtKB/TrEMBL
  Hydrolase UniProtKB/TrEMBL
PRINTS CATATPASE UniProtKB/TrEMBL
  NAKATPASE UniProtKB/TrEMBL
PROSITE ATPASE_E1_E2 UniProtKB/TrEMBL
SMART Cation_ATPase_N UniProtKB/TrEMBL
Superfamily-SCOP SSF56784 UniProtKB/TrEMBL
  SSF81653 UniProtKB/TrEMBL
  SSF81660 UniProtKB/TrEMBL
  SSF81665 UniProtKB/TrEMBL
UniProt A0A8C2VRU0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VUQ7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Atp1a2  ATPase Na+/K+ transporting subunit alpha 2    ATPase, Na+/K+ transporting, alpha 2 polypeptide  Symbol and/or name change 5135510 APPROVED