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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of branching involved in ureteric bud morphogenesis
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Accession:GO:0090189 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.


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regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (PMID:17036046) RGD PMID:17036046 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:12141440)
MGI:102780 (PMID:21281623)
(PMID:15634693)		 Ensembl
UniProt
RGD		 PMID:12141440 PMID:15634693 PMID:21281623 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:22194864)		 Ensembl
UniProt
RGD		 PMID:22194864 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:96,707,950...96,709,650
Ensembl chr 4:96,707,951...96,709,650 		JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO
IEA		 (PMID:18607644)
GO_REF:0000107		 RGD
Ensembl		 PMID:18607644 GO_REF:0000107 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
ISO		 PMID:17537984
(PMID:18607644)		 RGD PMID:18607644 PMID:17537984 RGD:1643596 NCBI chr  X:112,119,876...112,124,060
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IMP
ISO
IBA
IEA
IDA		 PMID:17537984
(PMID:17229286)
GO_REF:0000033
GO_REF:0000107
PMID:17522159
(PMID:17229286), (PMID:8657307)		 RGD
GO_Central
Ensembl		 PMID:8657307 PMID:17229286 PMID:17537984 PMID:17522159 GO_REF:0000033 GO_REF:0000107, RGD:1643596, RGD:8656002 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in		 ISO MGI:88180 (PMID:17522159), (PMID:21281623) RGD PMID:17522159 PMID:21281623 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Hoxb7 homeo box B7 involved_in ISO (PMID:17881463) RGD PMID:17881463 NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO (PMID:21523854) RGD PMID:21523854 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16216236)		 UniProt
RGD		 PMID:16216236 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (PMID:19268530) RGD PMID:19268530 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364 		JBrowse link
G Nog noggin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12141440), (PMID:17522159)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12141440 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:17314325), (PMID:17881463) RGD PMID:17314325 PMID:17881463 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within
involved_in		 ISO MGI:88180 (PMID:21281623)
(PMID:17300925)		 RGD PMID:17300925 PMID:21281623 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16396903)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21212101)		 UniProt
RGD		 PMID:21212101 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21212101)		 UniProt
RGD		 PMID:21212101 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16291795) RGD PMID:16291795 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (PMID:11507767) RGD PMID:11507767 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20069
    multicellular organismal process 8906
      morphogenesis of a branching structure 255
        regulation of morphogenesis of a branching structure 66
          regulation of branching involved in ureteric bud morphogenesis 25
            negative regulation of branching involved in ureteric bud morphogenesis 2
            positive regulation of branching involved in ureteric bud morphogenesis 23
Path 2
Term Annotations click to browse term
  biological_process 20069
    developmental process 7067
      anatomical structure development 6570
        multicellular organism development 5298
          system development 4583
            renal system development 423
              kidney development 409
                nephron development 192
                  nephron epithelium development 143
                    nephron tubule development 120
                      nephron tubule morphogenesis 92
                        mesonephric tubule morphogenesis 82
                          ureteric bud morphogenesis 78
                            branching involved in ureteric bud morphogenesis 70
                              regulation of branching involved in ureteric bud morphogenesis 25
                                negative regulation of branching involved in ureteric bud morphogenesis 2
                                positive regulation of branching involved in ureteric bud morphogenesis 23
paths to the root