ONTOLOGY REPORT - ANNOTATIONS
Term: nephron tubule morphogenesis
Accession: GO:0072078
browse the term
Definition: The process in which the anatomical structures of a nephron tubule are generated and organized. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.
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Wnt9b
Wnt family member 9B
ISO
MGI:3526437|MGI:3805020 (MGI:4353952|PMID:19543268)
RGD
PMID:19543268
MGI:4353952
NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
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Fgf1
fibroblast growth factor 1
ISO ISS
(PMID:11731227) GO_REF:0000024
RGD UniProt
PMID:11731227
GO_REF:0000024
NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
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Adamts16
ADAM metallopeptidase with thrombospondin type 1 motif, 16
ISO
(MGI:5504318|PMID:23661704)
RGD
PMID:23661704
MGI:5504318
NCBI chr 1:35,067,268...35,200,530
Ensembl chr 1:35,067,490...35,198,939
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Agt
angiotensinogen
NOT
ISO
MGI:2183545 (MGI:77583|PMID:8675666) (MGI:2655949|PMID:12657564)
RGD
PMID:8675666 PMID:12657564
MGI:2655949 MGI:77583
NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
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Bcl2
BCL2, apoptosis regulator
IEA ISO
GO_REF:0000107 MGI:97486 (MGI:3036971|PMID:14699151), (MGI:3768986|PMID:16672320)
Ensembl RGD
PMID:14699151 PMID:16672320
GO_REF:0000107 MGI:3036971 MGI:3768986
NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
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Bmp2
bone morphogenetic protein 2
IEA ISO
GO_REF:0000107 MGI:104903 (MGI:3583399|PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107 MGI:3583399
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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Bmp4
bone morphogenetic protein 4
IEA ISO ISS
GO_REF:0000107 MGI:1344337 (MGI:3714585|PMID:17522159) GO_REF:0000024 (PMID:12631064)
Ensembl RGD UniProt
PMID:12631064 PMID:17522159
GO_REF:0000024 GO_REF:0000107 MGI:3714585
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Cd44
CD44 molecule (Indian blood group)
ISO
(MGI:2449954|PMID:10926769)
RGD
PMID:10926769
MGI:2449954
NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
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Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
NOT
IMP ISO
PMID:15843474 (MGI:3717986|PMID:17615577)
RGD
PMID:17615577 , PMID:15843474
MGI:3717986 , RGD:8554075
NCBI chr X:72,128,996...72,133,692
Ensembl chr X:72,128,994...72,133,692
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
NOT
ISO
(MGI:3717986|PMID:17615577)
RGD
PMID:17615577
MGI:3717986
NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
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Ctnnb1
catenin beta 1
IEA ISO
GO_REF:0000107 MGI:1858008 (MGI:3714576|PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107 MGI:3714576
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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Ctnnbip1
catenin, beta-interacting protein 1
ISO
MGI:3045424 (MGI:3757813|PMID:17803964)
RGD
PMID:17803964
MGI:3757813
NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
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Dchs1
dachsous cadherin-related 1
ISO
MGI:4867020 (MGI:4939936|PMID:21303848)
RGD
PMID:21303848
MGI:4939936
NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
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Dlg1
discs large MAGUK scaffold protein 1
IEA ISO
GO_REF:0000107 MGI:2680670|MGI:3699270|MGI:3710242 (MGI:3688770|PMID:16105026), (MGI:3699022|PMID:17172448), (MGI:3709697|PMID:17435047)
Ensembl RGD
PMID:16105026 PMID:17172448 PMID:17435047
GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697
NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
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Dspp
dentin sialophosphoprotein
ISO
MGI:2653208 (MGI:3686561|PMID:16937369)
RGD
PMID:16937369
MGI:3686561
NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
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Eya1
EYA transcriptional coactivator and phosphatase 1
ISO
MGI:102780 (MGI:2662002|PMID:12783782)
RGD
PMID:12783782
MGI:2662002
NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
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Fat4
FAT atypical cadherin 4
ISO
MGI:3846573 (MGI:4939936|PMID:21303848)
RGD
PMID:21303848
MGI:4939936
NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
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Fgf2
fibroblast growth factor 2
ISO ISS
(PMID:12631064) GO_REF:0000024
RGD UniProt
PMID:12631064
GO_REF:0000024
NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
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Fgf8
fibroblast growth factor 8
ISO
MGI:2150348 (MGI:3603080|PMID:16049111)
RGD
PMID:16049111
MGI:3603080
NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
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Foxd1
forkhead box D1
ISO
(MGI:2675756|PMID:13678594)
RGD
PMID:13678594
MGI:2675756
NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
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Gdnf
glial cell derived neurotrophic factor
IEA ISO ISS
GO_REF:0000107 (MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623), (MGI:81287|PMID:8657307) GO_REF:0000024
Ensembl RGD UniProt
PMID:8657307 PMID:13678594 PMID:21281623
GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 MGI:81287
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Gli3
GLI family zinc finger 3
ISO
MGI:98297 (MGI:3611729|PMID:16396903)
RGD
PMID:16396903
MGI:3611729
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
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Gpc3
glypican 3
IEA ISO
GO_REF:0000107 MGI:88177|MGI:894293 (MGI:3583399|PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107 MGI:3583399
NCBI chr X:139,579,268...139,947,093
Ensembl chr X:139,579,268...139,916,883
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Greb1l
GREB1 like retinoic acid receptor coactivator
ISO
(MGI:6094060|PMID:29100091)
RGD
PMID:29100091
MGI:6094060
NCBI chr18:1,537,315...1,784,260
Ensembl chr18:1,723,565...1,784,233
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Gzf1
GDNF-inducible zinc finger protein 1
ISO
(MGI:2683817|PMID:14522971)
RGD
PMID:14522971
MGI:2683817
NCBI chr 3:143,003,706...143,015,906
Ensembl chr 3:143,003,796...143,015,904
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Hoxa11
homeobox A11
ISO
MGI:96203 (MGI:2135652|PMID:11493536)
RGD
PMID:11493536
MGI:2135652
NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503 Ensembl chr 4:82,298,152...82,300,503
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Hoxd11
homeobox D11
ISO
MGI:96172 (MGI:2135652|PMID:11493536)
RGD
PMID:11493536
MGI:2135652
NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
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Ilk
integrin-linked kinase
ISO
(MGI:3575981|PMID:15831470)
RGD
PMID:15831470
MGI:3575981
NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
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Lama5
laminin subunit alpha 5
ISO
(MGI:2678847|PMID:14568553)
RGD
PMID:14568553
MGI:2678847
NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
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Lhx1
LIM homeobox 1
ISO
(PMID:7909549)
RGD
PMID:7909549
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Myc
MYC proto-oncogene, bHLH transcription factor
ISS ISO
GO_REF:0000024 (MGI:3830398|PMID:19161241)
UniProt RGD
PMID:19161241
GO_REF:0000024 MGI:3830398
NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
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Npnt
nephronectin
ISO
MGI:3715213 (MGI:3714574|PMID:17537792)
RGD
PMID:17537792
MGI:3714574
NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
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Pax2
paired box 2
ISO ISS
(PMID:1337742) MGI:1857114|MGI:88138 (MGI:3768986|PMID:16672320) GO_REF:0000024
RGD UniProt
PMID:1337742 PMID:16672320
GO_REF:0000024 MGI:3768986
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISO
(PMID:1337742)
RGD
PMID:1337742
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Pbx1
PBX homeobox 1
ISO
(MGI:2451200|PMID:12591246)
RGD
PMID:12591246
MGI:2451200
NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
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Pgf
placental growth factor
ISO
(MGI:2675756|PMID:13678594)
RGD
PMID:13678594
MGI:2675756
NCBI chr 6:108,994,016...109,004,598
Ensembl chr 6:108,994,018...109,004,598
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Pkd2
polycystin 2, transient receptor potential cation channel
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
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Pspn
persephin
ISO
(MGI:1196665|PMID:9491986)
RGD
PMID:9491986
MGI:1196665
NCBI chr 9:10,044,756...10,045,314
Ensembl chr 9:10,044,756...10,045,314
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Ptch1
patched 1
ISO
MGI:1857447 (MGI:4367286|PMID:19809516)
RGD
PMID:19809516
MGI:4367286
NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
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Sall1
spalt-like transcription factor 1
ISO
(MGI:2447943|PMID:12482961)
RGD
PMID:12482961
MGI:2447943
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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Shh
sonic hedgehog signaling molecule
IEA ISO ISS
GO_REF:0000107 MGI:1857796 (MGI:3611729|PMID:16396903) GO_REF:0000024
Ensembl RGD UniProt
PMID:16396903
GO_REF:0000024 GO_REF:0000107 MGI:3611729
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
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Six1
SIX homeobox 1
ISO
MGI:109344 (MGI:2662002|PMID:12783782)
RGD
PMID:12783782
MGI:2662002
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
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Smad4
SMAD family member 4
IEA ISO
GO_REF:0000107 MGI:104903|MGI:88177 (MGI:3583399|PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107 MGI:3583399
NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
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Sox9
SRY-box transcription factor 9
ISO
(PMID:8787755)
RGD
PMID:8787755
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Tcf21
transcription factor 21
ISS ISO
GO_REF:0000024 MGI:2148207 (MGI:1202620|PMID:9507058), (MGI:1347485|PMID:10572052)
UniProt RGD
PMID:9507058 PMID:10572052
GO_REF:0000024 MGI:1202620 MGI:1347485
NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
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Timeless
timeless circadian regulator
IMP
RGD
PMID:10963667
RGD:2308864
NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
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Wnt1
Wnt family member 1
ISO
MGI:1197020 (MGI:3588895|PMID:16054034)
RGD
PMID:16054034
MGI:3588895
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
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Wnt4
Wnt family member 4
IEA ISO
GO_REF:0000107 (MGI:3588895|PMID:16054034)
Ensembl RGD
PMID:16054034
GO_REF:0000107 MGI:3588895
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Wnt6
Wnt family member 6
ISO
UniProtKB:P22724 (MGI:2178881|PMID:11948913)
RGD
PMID:11948913
MGI:2178881
NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
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Wnt9b
Wnt family member 9B
ISO
MGI:3526437|MGI:98953 (MGI:3588895|PMID:16054034)
RGD
PMID:16054034
MGI:3588895
NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
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Wt1
WT1 transcription factor
ISO ISS
UniProtKB:P22561 (PMID:10101119) (MGI:1333093|PMID:10101119) GO_REF:0000024
RGD UniProt
PMID:10101119
GO_REF:0000024 MGI:1333093
NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
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Foxd1
forkhead box D1
IEA ISO ISS
GO_REF:0000107 (MGI:3525902|PMID:15634693) GO_REF:0000024
Ensembl RGD UniProt
PMID:15634693
GO_REF:0000024 GO_REF:0000107 MGI:3525902
NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
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Klhl3
kelch-like family member 3
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:22406640), (PMID:23453970), (PMID:23576762)
UniProt Ensembl RGD
PMID:22406640 PMID:23453970 PMID:23576762
GO_REF:0000024 GO_REF:0000107
NCBI chr17:6,924,423...7,029,374
Ensembl chr17:6,935,860...7,029,240
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Wnk4
WNK lysine deficient protein kinase 4
ISS ISO
GO_REF:0000024 (PMID:23453970), (PMID:23576762)
UniProt RGD
PMID:23453970 PMID:23576762
GO_REF:0000024
NCBI chr10:89,181,139...89,198,213
Ensembl chr10:89,181,165...89,198,213
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Hnf1b
HNF1 homeobox B
ISO
MGI:1857856 (MGI:4430439|PMID:20040500)
RGD
PMID:20040500
MGI:4430439
NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
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Wnt9b
Wnt family member 9B
ISO
MGI:3526437 (MGI:3588895|PMID:16054034)
RGD
PMID:16054034
MGI:3588895
NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
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Gpc3
glypican 3
IEA ISO ISS
GO_REF:0000107 MGI:2159356 (MGI:1931343|PMID:11180950) GO_REF:0000024
Ensembl RGD UniProt
PMID:11180950
GO_REF:0000024 GO_REF:0000107 MGI:1931343
NCBI chr X:139,579,268...139,947,093
Ensembl chr X:139,579,268...139,916,883
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Osr1
odd-skipped related transcription factor 1
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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Pax2
paired box 2
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Six1
SIX homeobox 1
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
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Pkd1
polycystin 1, transient receptor potential channel interacting
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
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Pax2
paired box 2
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Sox8
SRY-box transcription factor 8
ISS ISO
GO_REF:0000024 MGI:98371 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
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Sox9
SRY-box transcription factor 9
ISS ISO
GO_REF:0000024 MGI:98370 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Hes1
hes family bHLH transcription factor 1
IEA ISO
GO_REF:0000107 (PMID:15465493)
Ensembl RGD
PMID:15465493
GO_REF:0000107
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
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Hes5
hes family bHLH transcription factor 5
ISO
(PMID:15465493)
RGD
PMID:15465493
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
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Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
ISO
(MGI:5006869|PMID:21523854)
RGD
PMID:21523854
MGI:5006869
NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
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Bmp4
bone morphogenetic protein 4
IEA ISO ISS
GO_REF:0000107 (PMID:10706139), (PMID:17118062) GO_REF:0000024
Ensembl RGD UniProt
PMID:10706139 PMID:17118062
GO_REF:0000024 GO_REF:0000107
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Bmp4
bone morphogenetic protein 4
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:102780 (MGI:3525902|PMID:15634693), (MGI:4949995|PMID:21281623) (PMID:12141440), (PMID:17118062)
UniProt Ensembl RGD
PMID:12141440 PMID:15634693 PMID:17118062 PMID:21281623
GO_REF:0000024 GO_REF:0000107 MGI:3525902 MGI:4949995
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Tacstd2
tumor-associated calcium signal transducer 2
IEA ISO ISS
GO_REF:0000107 (MGI:5315060|PMID:22194864) GO_REF:0000024
Ensembl RGD UniProt
PMID:22194864
GO_REF:0000024 GO_REF:0000107 MGI:5315060
NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
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Gata3
GATA binding protein 3
ISS ISO
GO_REF:0000024 (MGI:3822373|PMID:19112489)
UniProt RGD
PMID:19112489
GO_REF:0000024 MGI:3822373
NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
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Gata3
GATA binding protein 3
ISS ISO
GO_REF:0000024 (MGI:3822373|PMID:19112489)
UniProt RGD
PMID:19112489
GO_REF:0000024 MGI:3822373
NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
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Ctnnb1
catenin beta 1
IEA ISO
GO_REF:0000107 MGI:1858008 (MGI:3714576|PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107 MGI:3714576
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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Wnt6
Wnt family member 6
ISO
(MGI:2178881|PMID:11948913)
RGD
PMID:11948913
MGI:2178881
NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
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Agt
angiotensinogen
ISO
(PMID:18607644)
RGD
PMID:18607644
NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
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Agtr1a
angiotensin II receptor, type 1a
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
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Agtr1b
angiotensin II receptor, type 1b
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr 2:105,149,020...105,224,335
Ensembl chr 2:105,149,020...105,224,295
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Agtr2
angiotensin II receptor, type 2
IMP ISO
PMID:17537984 (MGI:3808848|PMID:18607644)
RGD
PMID:18607644 , PMID:17537984
MGI:3808848 , RGD:1643596
NCBI chr X:119,389,480...119,393,845
Ensembl chr X:119,390,013...119,393,842
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Bmp4
bone morphogenetic protein 4
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Gdnf
glial cell derived neurotrophic factor
IMP IBA ISO IEA IDA
PMID:17537984 PMID:21873635 (MGI:5284782|PMID:17229286) (PMID:17229286), (PMID:8657307) GO_REF:0000107 PMID:17522159
RGD Ensembl
PMID:8657307 PMID:17229286 , PMID:17537984 , PMID:21873635 , PMID:17522159
GO_REF:0000107 MGI:5284782 , RGD:1643596 , RGD:13792537 , RGD:8656002
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Grem1
gremlin 1, DAN family BMP antagonist
ISO
MGI:88180 (MGI:3714585|PMID:17522159), (MGI:4949995|PMID:21281623)
RGD
PMID:17522159 PMID:21281623
MGI:3714585 MGI:4949995
NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
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Hoxb7
homeo box B7
ISO
(MGI:3833510|PMID:17881463)
RGD
PMID:17881463
MGI:3833510
NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
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Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
ISO
(MGI:5006869|PMID:21523854)
RGD
PMID:21523854
MGI:5006869
NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
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Lhx1
LIM homeobox 1
ISS ISO
GO_REF:0000024 (MGI:3613206|PMID:16216236)
UniProt RGD
PMID:16216236
GO_REF:0000024 MGI:3613206
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Maged1
MAGE family member D1
ISO
(MGI:3848096|PMID:19268530)
RGD
PMID:19268530
MGI:3848096
NCBI chr X:63,803,194...63,809,715
Ensembl chr X:63,803,189...63,809,861
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Nog
noggin
IEA ISO ISS
GO_REF:0000107 (MGI:2446986|PMID:12141440), (MGI:3714585|PMID:17522159) GO_REF:0000024
Ensembl RGD UniProt
PMID:12141440 PMID:17522159
GO_REF:0000024 GO_REF:0000107 MGI:2446986 MGI:3714585
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
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Pax2
paired box 2
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188)
UniProt RGD
PMID:17314325 PMID:17538188 PMID:17881463
GO_REF:0000024 MGI:3704067 MGI:3833510 MGI:5009394
NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
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Pax8
paired box 8
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
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Sall1
spalt-like transcription factor 1
ISO
MGI:3603818 (MGI:5563280|PMID:24550112)
RGD
PMID:24550112
MGI:5563280
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
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Six1
SIX homeobox 1
ISO
MGI:88180 (MGI:4949995|PMID:21281623), (MGI:5009396|PMID:17300925)
RGD
PMID:17300925 PMID:21281623
MGI:4949995 MGI:5009396
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
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Six4
SIX homeobox 4
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
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Smo
smoothened, frizzled class receptor
IEA ISO ISS
GO_REF:0000107 (MGI:3611729|PMID:16396903) GO_REF:0000024
Ensembl RGD UniProt
PMID:16396903
GO_REF:0000024 GO_REF:0000107 MGI:3611729
NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
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Sox8
SRY-box transcription factor 8
ISS ISO
GO_REF:0000024 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
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Sox9
SRY-box transcription factor 9
ISS ISO
GO_REF:0000024 (MGI:4939090|PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024 MGI:4939090
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Tgfb1
transforming growth factor, beta 1
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
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Vegfa
vascular endothelial growth factor A
ISO
(MGI:3611700|PMID:16291795)
RGD
PMID:16291795
MGI:3611700
NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
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Wnt2b
Wnt family member 2B
ISO
(MGI:2150217|PMID:11507767)
RGD
PMID:11507767
MGI:2150217
NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
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Gata3
GATA binding protein 3
ISS ISO
GO_REF:0000024 (MGI:3822373|PMID:19112489)
UniProt RGD
PMID:19112489
GO_REF:0000024 MGI:3822373
NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
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Gdnf
glial cell derived neurotrophic factor
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:8657307)
Ensembl UniProt RGD
PMID:8657307
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Six1
SIX homeobox 1
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
G
Six4
SIX homeobox 4
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
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Lzts2
leucine zipper tumor suppressor 2
IEA ISO
GO_REF:0000107 MGI:5302222 (MGI:5297624|PMID:21949185)
Ensembl RGD
PMID:21949185
GO_REF:0000107 MGI:5297624
NCBI chr 1:264,765,256...264,776,553
Ensembl chr 1:264,768,105...264,776,616
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Ahi1
Abelson helper integration site 1
ISS ISO
GO_REF:0000024 UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt RGD
PMID:21959375
GO_REF:0000024 MGI:5306539
NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
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Commd5
COMM domain containing 5
IDA
PMID:24515317
UniProt
PMID:24515317
RGD:10047245
NCBI chr 7:117,963,213...117,965,010
Ensembl chr 7:118,502,676...118,504,097 Ensembl chr 7:118,502,676...118,504,097
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Hnf1b
HNF1 homeobox B
ISO
MGI:1857856 (MGI:4430439|PMID:20040500)
RGD
PMID:20040500
MGI:4430439
NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
G
Six1
SIX homeobox 1
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
G
Six4
SIX homeobox 4
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
G
Six2
SIX homeobox 2
ISO
(MGI:3691408|PMID:17036046)
RGD
PMID:17036046
MGI:3691408
NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
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Gdnf
glial cell derived neurotrophic factor
IDA
PMID:19112489
UniProt
PMID:19112489
RGD:8656008
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
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Osr1
odd-skipped related transcription factor 1
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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Hes5
hes family bHLH transcription factor 5
ISO
(PMID:15821257)
RGD
PMID:15821257
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
G
Irx1
iroquois homeobox 1
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:33,910,912...33,916,741
Ensembl chr 1:33,910,912...33,916,741
G
Irx2
iroquois homeobox 2
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:33,270,388...33,275,868
Ensembl chr 1:33,271,977...33,275,540
G
Irx3
iroquois homeobox 3
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr19:15,838,714...15,842,135
Ensembl chr19:15,838,714...15,840,990
G
Osr1
odd-skipped related transcription factor 1
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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Hnf1b
HNF1 homeobox B
ISO
MGI:1857856 (MGI:4430439|PMID:20040500)
RGD
PMID:20040500
MGI:4430439
NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
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Gata3
GATA binding protein 3
ISS ISO
GO_REF:0000024 (MGI:3611949|PMID:16319112)
UniProt RGD
PMID:16319112
GO_REF:0000024 MGI:3611949
NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
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Gdnf
glial cell derived neurotrophic factor
IEA ISO
GO_REF:0000107 (MGI:81287|PMID:8657307)
Ensembl RGD
PMID:8657307
GO_REF:0000107 MGI:81287
NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
G
Grem1
gremlin 1, DAN family BMP antagonist
ISO
(MGI:3714585|PMID:17522159)
RGD
PMID:17522159
MGI:3714585
NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
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Hs2st1
heparan sulfate 2-O-sulfotransferase 1
ISO
MGI:1934916 (MGI:1270048|PMID:9637690)
RGD
PMID:9637690
MGI:1270048
NCBI chr 2:250,467,428...250,600,517
Ensembl chr 2:250,467,429...250,600,517
G
Nog
noggin
IEA ISO
GO_REF:0000107 (MGI:3714585|PMID:17522159)
Ensembl RGD
PMID:17522159
GO_REF:0000107 MGI:3714585
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
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Fmn1
formin 1
ISO
(MGI:65439|PMID:7517224)
RGD
PMID:7517224
MGI:65439
NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
G
Kif26b
kinesin family member 26B
ISO
MGI:4459557 (MGI:4454194|PMID:20439720)
RGD
PMID:20439720
MGI:4454194
NCBI chr13:96,775,356...97,173,469
Ensembl chr13:96,775,357...97,173,469
G
Sall1
spalt-like transcription factor 1
ISO
MGI:2388379 (MGI:2149437|PMID:11688560), (MGI:3665498|PMID:16839447)
RGD
PMID:11688560 PMID:16839447
MGI:2149437 MGI:3665498
NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
G
Hes1
hes family bHLH transcription factor 1
IEA ISO
GO_REF:0000107 (PMID:15821257)
Ensembl RGD
PMID:15821257
GO_REF:0000107
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
ISO
(PMID:15821257)
RGD
PMID:15821257
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
G
Tacstd2
tumor-associated calcium signal transducer 2
IEA ISO
GO_REF:0000107 (PMID:22194864)
Ensembl RGD
PMID:22194864
GO_REF:0000107
NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
G
Wnt11
Wnt family member 11
ISO
(PMID:9757009)
RGD
PMID:9757009
NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
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