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ONTOLOGY REPORT - ANNOTATIONS

Term:sarcoplasm
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Accession:GO:0016528 term browser browse the term
Definition:The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum.
Synonyms:xref: Wikipedia:Sarcoplasm
 never_in_taxon: NCBITaxon:4751 ! Fungi

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
sarcoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd2 ankyrin repeat domain 2 located_in ISO (PMID:18302940), (PMID:24434510) MGI PMID:18302940 PMID:24434510 NCBI chrNW_004936636:2,125,796...2,137,234
Ensembl chrNW_004936636:2,125,787...2,136,870 		JBrowse link
G Baalc BAALC binder of MAP3K1 and KLF4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,506,596...40,590,537
Ensembl chrNW_004936470:40,508,338...40,579,585 		JBrowse link
G Bcl9 BCL9 transcription coactivator located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936867:136,798...158,936
Ensembl chrNW_004936867:139,418...158,763 		JBrowse link
G Cavin4 caveolae associated protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:8,868,295...8,882,398
Ensembl chrNW_004936524:8,868,721...8,876,019 		JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,381,215...40,392,105
Ensembl chrNW_004936470:40,377,835...40,392,225 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in ISO (PMID:14688250) MGI PMID:14688250 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G E2f5 E2F transcription factor 5 ISO RGD PMID:10725332 RGD:1581722 NCBI chrNW_004936544:124,243...153,325
Ensembl chrNW_004936544:125,360...152,670 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,931,665...4,959,032
Ensembl chrNW_004936588:4,927,950...4,959,064 		JBrowse link
G Fabp3 fatty acid binding protein 3 ISO RGD PMID:2032944 RGD:1582411 NCBI chrNW_004936474:14,576,582...14,584,362
Ensembl chrNW_004936474:14,574,891...14,585,706 		JBrowse link
G Flnc filamin C located_in ISO PMID:21223964 BHF-UCL PMID:21223964 RGD:8554309 NCBI chrNW_004936479:15,756,370...15,784,365
Ensembl chrNW_004936479:15,756,370...15,784,359 		JBrowse link
G Gsn gelsolin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:9,749,755...9,802,787
Ensembl chrNW_004936487:9,764,944...9,802,841 		JBrowse link
G Ifrd1 interferon related developmental regulator 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936795:573,740...594,316
Ensembl chrNW_004936795:573,581...594,278 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 located_in ISO (PMID:12952984) MGI PMID:12952984 NCBI chrNW_004936521:2,000,113...2,706,010
Ensembl chrNW_004936521:2,000,109...2,705,365 		JBrowse link
G LOC101957084 plectin located_in ISO PMID:21223964 BHF-UCL PMID:21223964 RGD:8554309 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978 		JBrowse link
G Mb myoglobin located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936492:4,890,871...4,897,665
Ensembl chrNW_004936492:4,890,871...4,897,665 		JBrowse link
G Myh10 myosin heavy chain 10 located_in ISO (PMID:12893741) MGI PMID:12893741 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 ISO MMO:0000679 RGD PMID:30907990 RGD:329337341 NCBI chrNW_004936616:484,062...584,950
Ensembl chrNW_004936616:484,045...587,891 		JBrowse link
G Nol3 nucleolar protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211 		JBrowse link
G Scn3a sodium voltage-gated channel alpha subunit 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:14,072,182...14,180,552
Ensembl chrNW_004936469:14,101,868...14,179,998 		JBrowse link
G Serpinb5 serpin family B member 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,067,796...2,089,965
Ensembl chrNW_004936497:2,069,035...2,089,745 		JBrowse link
G Sertad1 SERTA domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,792,501...2,793,901
Ensembl chrNW_004936661:2,792,850...2,793,590 		JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 located_in ISO (PMID:10842087) UniProt PMID:10842087 NCBI chrNW_004936597:4,000,433...4,493,920
Ensembl chrNW_004936597:4,000,400...4,156,221 		JBrowse link
G Tnnt2 troponin T2, cardiac type located_in ISO (PMID:15830381) MGI PMID:15830381 NCBI chrNW_004936567:3,052,167...3,069,077
Ensembl chrNW_004936567:3,056,845...3,068,887 		JBrowse link
junctional membrane complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:1,573,237...1,578,257
Ensembl chrNW_004936621:1,574,033...1,575,376 		JBrowse link
G Casq2 calsequestrin 2 part_of ISO (PMID:19920148) UniProt PMID:19920148 NCBI chrNW_004936627:1,001,681...1,069,377
Ensembl chrNW_004936627:1,001,678...1,069,438 		JBrowse link
G Jph1 junctophilin 1 part_of ISO (PMID:10949023) UniProt PMID:10949023 NCBI chrNW_004936648:2,868,419...2,956,370 JBrowse link
G Jph2 junctophilin 2 part_of ISO (PMID:10949023) UniProt PMID:10949023 NCBI chrNW_004936530:2,570,365...2,606,743 JBrowse link
G Jph3 junctophilin 3 part_of IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936641:1,619,640...1,668,480
Ensembl chrNW_004936641:1,620,652...1,668,486 		JBrowse link
G Jph4 junctophilin 4 part_of IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936722:842,324...851,190
Ensembl chrNW_004936722:841,816...851,135 		JBrowse link
G LOC101962457 triadin part_of ISO PMID:22505613 RGD
BHF-UCL		 PMID:22505613 RGD:7327226 NCBI chrNW_004936802:389,653...637,372 JBrowse link
G Ryr1 ryanodine receptor 1 part_of ISO (PMID:10444070) MGI PMID:10444070 NCBI chrNW_004936801:1,185,615...1,298,416
Ensembl chrNW_004936801:1,185,733...1,298,289 		JBrowse link
G Ryr3 ryanodine receptor 3 part_of ISO (PMID:10444070) MGI PMID:10444070 NCBI chrNW_004936673:2,078,095...2,434,872
Ensembl chrNW_004936673:1,932,755...2,434,066 		JBrowse link
junctional sarcoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap6 A-kinase anchoring protein 6 located_in ISO PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chrNW_004936494:6,744,923...7,228,670
Ensembl chrNW_004936494:6,744,892...7,228,686 		JBrowse link
G Asph aspartate beta-hydroxylase located_in ISO (PMID:8530521) UniProt PMID:8530521 NCBI chrNW_004936496:11,604,992...11,815,680
Ensembl chrNW_004936496:11,604,680...11,816,852 		JBrowse link
G Jph1 junctophilin 1 located_in ISO (PMID:10949023) UniProt PMID:10949023 NCBI chrNW_004936648:2,868,419...2,956,370 JBrowse link
G LOC101962457 triadin located_in ISO PMID:22505613 RGD
BHF-UCL		 PMID:7565919 PMID:22505613 RGD:2314606 RGD:7327226 NCBI chrNW_004936802:389,653...637,372 JBrowse link
G Reep5 receptor accessory protein 5 located_in ISO (PMID:32075961) UniProt PMID:32075961 NCBI chrNW_004936531:7,055,841...7,103,810
Ensembl chrNW_004936531:7,053,039...7,104,288 		JBrowse link
longitudinal sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in ISO (PMID:16402920) BHF-UCL PMID:16402920 NCBI chrNW_004936558:3,300,941...3,357,595
Ensembl chrNW_004936558:3,300,941...3,357,941 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:2,732,106...2,769,782
Ensembl chrNW_004936595:2,732,103...2,752,131 		JBrowse link
phospholamban complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban part_of ISO (PMID:16043693) ComplexPortal PMID:16043693 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839 		JBrowse link
sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase ISO RGD PMID:15180797 RGD:1642741 NCBI chrNW_004937224:23,225...32,639 JBrowse link
G Akap6 A-kinase anchoring protein 6 located_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:7721854 GO_REF:0000107 GO_REF:0000118 RGD:6902944 NCBI chrNW_004936494:6,744,923...7,228,670
Ensembl chrNW_004936494:6,744,892...7,228,686 		JBrowse link
G Akap7 A-kinase anchoring protein 7 ISO RGD PMID:17901878 RGD:2312630 NCBI chrNW_004936790:223,080...339,078
Ensembl chrNW_004936790:223,218...339,713 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086 		JBrowse link
G Ank1 ankyrin 1 ISO RGD PMID:9024692 PMID:12631729 RGD:11251703 RGD:633514 NCBI chrNW_004936785:738,323...944,734
Ensembl chrNW_004936785:738,317...942,381 		JBrowse link
G Ank3 ankyrin 3 ISO RGD PMID:9664041 RGD:631996 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Asph aspartate beta-hydroxylase located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936496:11,604,992...11,815,680
Ensembl chrNW_004936496:11,604,680...11,816,852 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:8447366 PMID:12409282 PMID:19029185 GO_REF:0000043 GO_REF:0000107 RGD:2313265 RGD:7241223 RGD:724593 NCBI chrNW_004936501:11,818,301...11,836,221
Ensembl chrNW_004936501:11,816,585...11,836,231 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in ISO
IEA		 RGD
Ensembl
UniProt		 PMID:8447366 PMID:12409282 PMID:17901878 GO_REF:0000043 GO_REF:0000107 RGD:2312630 RGD:7241223 RGD:724593 NCBI chrNW_004936558:3,300,941...3,357,595
Ensembl chrNW_004936558:3,300,941...3,357,941 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 located_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936677:552,066...585,093
Ensembl chrNW_004936677:551,933...585,114 		JBrowse link
G Ca4 carbonic anhydrase 4 ISO RGD PMID:8911968 RGD:1600749 NCBI chrNW_004936490:1,764,845...1,773,752
Ensembl chrNW_004936490:1,764,795...1,774,645 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,269,283...3,331,858
Ensembl chrNW_004936567:3,269,355...3,331,460 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936734:577,656...1,027,412
Ensembl chrNW_004936734:581,538...1,027,018 		JBrowse link
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 located_in ISO (PMID:8943043) MGI PMID:8943043 NCBI chrNW_004936490:14,448,305...14,468,785
Ensembl chrNW_004936490:14,448,258...14,468,785 		JBrowse link
G Calr calreticulin located_in ISO
IEA		 RGD
UniProt		 PMID:8600158 GO_REF:0000043 RGD:2313254 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430 		JBrowse link
G Calu calumenin located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936479:15,665,979...15,697,016
Ensembl chrNW_004936479:15,665,946...15,698,560 		JBrowse link
G Casq1 calsequestrin 1 located_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:19029185 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:2313265 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G Casq2 calsequestrin 2 located_in ISO
IEA		 RGD
UniProt		 PMID:17569730 GO_REF:0000043 GO_REF:0000117 RGD:2314601 NCBI chrNW_004936627:1,001,681...1,069,377
Ensembl chrNW_004936627:1,001,678...1,069,438 		JBrowse link
G Ccdc78 coiled-coil domain containing 78 located_in ISO (PMID:22818856) UniProt PMID:22818856 NCBI chrNW_004936501:289,765...294,272 JBrowse link
G Col6a1 collagen type VI alpha 1 chain is_active_in ISO (PMID:22024752) MGI PMID:22024752 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Fabp3 fatty acid binding protein 3 NOT ISO RGD PMID:2032944 RGD:1582411 NCBI chrNW_004936474:14,576,582...14,584,362
Ensembl chrNW_004936474:14,574,891...14,585,706 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B located_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936493:7,916,002...7,922,747
Ensembl chrNW_004936493:7,916,002...7,922,796 		JBrowse link
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase is_active_in ISO (PMID:18222920) MGI PMID:18222920 NCBI chrNW_004936623:3,359,624...3,376,598
Ensembl chrNW_004936623:3,351,716...3,375,146 		JBrowse link
G Hax1 HCLS1 associated protein X-1 part_of
located_in		 ISO
IEA		 PMID:19920172 CACAO
TreeGrafter
Ensembl
UniProt		 PMID:19920172 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:10047287 NCBI chrNW_004936580:3,961,433...3,964,322
Ensembl chrNW_004936580:3,961,441...3,964,322 		JBrowse link
G Hk2 hexokinase 2 ISO MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936556:1,054,143...1,113,425
Ensembl chrNW_004936556:1,054,021...1,113,450 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:16014380 GO_REF:0000107 RGD:7175269 NCBI chrNW_004936577:3,896,455...4,198,396
Ensembl chrNW_004936577:3,896,390...4,198,411 		JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 located_in ISO
IEA		 RGD
Ensembl		 PMID:16014380 GO_REF:0000107 RGD:7175269 NCBI chrNW_004936548:646,019...1,120,426
Ensembl chrNW_004936548:645,925...1,121,888 		JBrowse link
G Jph1 junctophilin 1 located_in ISO (PMID:10949023) UniProt PMID:10949023 NCBI chrNW_004936648:2,868,419...2,956,370 JBrowse link
G Jph2 junctophilin 2 located_in ISO (PMID:10949023) MGI PMID:10949023 NCBI chrNW_004936530:2,570,365...2,606,743 JBrowse link
G Jsrp1 junctional sarcoplasmic reticulum protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:1,345,880...1,349,583
Ensembl chrNW_004936588:1,345,853...1,349,523 		JBrowse link
G Klhl41 kelch like family member 41 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936509:47,298...62,608
Ensembl chrNW_004936509:47,463...66,556 		JBrowse link
G LOC101955706 peptidyl-prolyl cis-trans isomerase FKBP1A located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004936623:3,884,704...3,885,255 JBrowse link
G LOC101962457 triadin located_in ISO (PMID:9287354) RGD
BHF-UCL		 PMID:9287354 PMID:21811790 RGD:7327228 NCBI chrNW_004936802:389,653...637,372 JBrowse link
G Mtmr12 myotubularin related protein 12 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004936518:8,455,669...8,534,583
Ensembl chrNW_004936518:8,455,621...8,534,697 		JBrowse link
G Nol3 nucleolar protein 3 located_in ISO PMID:23382383 UniProt PMID:23382383 RGD:10047354 NCBI chrNW_004936475:17,644,299...17,648,213
Ensembl chrNW_004936475:17,644,653...17,648,211 		JBrowse link
G Nos1 nitric oxide synthase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414 		JBrowse link
G Nox4 NADPH oxidase 4 ISO MMO:0000679 RGD PMID:21896730 RGD:329849108 NCBI chrNW_004936736:230,465...394,859
Ensembl chrNW_004936736:230,476...396,708 		JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:26365878 RGD:401900132 NCBI chrNW_004936496:280,593...305,900
Ensembl chrNW_004936496:280,558...305,904 		JBrowse link
G Oprm1 opioid receptor mu 1 located_in ISO RGD PMID:26686371 RGD:401831050 NCBI chrNW_004936489:6,506,207...6,567,136
Ensembl chrNW_004936489:6,506,207...6,548,946 		JBrowse link
G Pln phospholamban located_in ISO
IEA		 RGD
TreeGrafter
Ensembl
UniProt		 PMID:12403631 PMID:17901878 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2312630 RGD:633528 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839 		JBrowse link
G Pomt1 protein O-mannosyltransferase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:18,249,472...18,267,875
Ensembl chrNW_004936487:18,249,472...18,267,256 		JBrowse link
G Pygm glycogen phosphorylase, muscle associated ISO RGD PMID:11692172 PMID:12967914 RGD:1599897 RGD:1599989 NCBI chrNW_004936599:4,551,164...4,564,109
Ensembl chrNW_004936599:4,551,032...4,564,154 		JBrowse link
G Rasd1 ras related dexamethasone induced 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,120,527...1,123,326
Ensembl chrNW_004936741:1,121,303...1,123,386 		JBrowse link
G Reep5 receptor accessory protein 5 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936531:7,055,841...7,103,810
Ensembl chrNW_004936531:7,053,039...7,104,288 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in ISO
IEA		 MMO:0000679 RGD
UniProt		 PMID:19230144 PMID:21896730 GO_REF:0000043 RGD:329849108 RGD:7175256 NCBI chrNW_004936801:1,185,615...1,298,416
Ensembl chrNW_004936801:1,185,733...1,298,289 		JBrowse link
G Ryr2 ryanodine receptor 2 located_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:21807619 GO_REF:0000043 GO_REF:0000107 RGD:7175254 NCBI chrNW_004936484:15,402,488...15,825,410
Ensembl chrNW_004936484:15,403,819...15,824,441 		JBrowse link
G Ryr3 ryanodine receptor 3 located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936673:2,078,095...2,434,872
Ensembl chrNW_004936673:1,932,755...2,434,066 		JBrowse link
G S100a1 S100 calcium binding protein A1 located_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:3,429,697...3,433,567
Ensembl chrNW_004936580:3,427,212...3,434,577 		JBrowse link
G Sar1a secretion associated Ras related GTPase 1A located_in ISO (PMID:14728599) MGI PMID:14728599 NCBI chrNW_004936521:8,422,511...8,439,945
Ensembl chrNW_004936521:8,422,446...8,441,333 		JBrowse link
G Sgcd sarcoglycan delta located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:6,278,631...6,908,193
Ensembl chrNW_004936515:6,283,051...6,908,174 		JBrowse link
G Slc2a4 solute carrier family 2 member 4 ISO MMO:0000662 RGD PMID:29676955 RGD:13703029 NCBI chrNW_004936595:567,267...574,051
Ensembl chrNW_004936595:567,219...574,059 		JBrowse link
G Slc30a7 solute carrier family 30 member 7 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004936748:910,542...985,601
Ensembl chrNW_004936748:910,511...987,094 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 located_in ISO (PMID:15671068) UniProt PMID:15671068 NCBI chrNW_004936495:7,658,250...7,949,417 JBrowse link
G Thbs1 thrombospondin 1 located_in ISO (PMID:22682248) UniProt PMID:22682248 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949 		JBrowse link
G Thbs4 thrombospondin 4 located_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936549:7,781,214...7,828,569
Ensembl chrNW_004936549:7,780,842...7,829,379 		JBrowse link
G Tmem38a transmembrane protein 38A located_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936596:3,965,220...3,984,120
Ensembl chrNW_004936596:3,965,203...3,984,006 		JBrowse link
G Xdh xanthine dehydrogenase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
sarcoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430 		JBrowse link
G Calu calumenin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936479:15,665,979...15,697,016
Ensembl chrNW_004936479:15,665,946...15,698,560 		JBrowse link
G Casq1 calsequestrin 1 located_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G Casq2 calsequestrin 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004936627:1,001,681...1,069,377
Ensembl chrNW_004936627:1,001,678...1,069,438 		JBrowse link
sarcoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asph aspartate beta-hydroxylase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936496:11,604,992...11,815,680
Ensembl chrNW_004936496:11,604,680...11,816,852 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936501:11,818,301...11,836,221
Ensembl chrNW_004936501:11,816,585...11,836,231 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936558:3,300,941...3,357,595
Ensembl chrNW_004936558:3,300,941...3,357,941 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936677:552,066...585,093
Ensembl chrNW_004936677:551,933...585,114 		JBrowse link
G Casq1 calsequestrin 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G Cherp calcium homeostasis endoplasmic reticulum protein located_in ISO PMID:21454501 UniProt PMID:21454501 RGD:8554079 NCBI chrNW_004936596:4,084,091...4,102,096
Ensembl chrNW_004936596:4,083,920...4,103,990 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:2,732,106...2,769,782
Ensembl chrNW_004936595:2,732,103...2,752,131 		JBrowse link
G Dmpk DM1 protein kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:2,125,237...2,135,974
Ensembl chrNW_004936706:2,124,238...2,134,976 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:7,916,002...7,922,747
Ensembl chrNW_004936493:7,916,002...7,922,796 		JBrowse link
G Hrc histidine rich calcium binding protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,088,072...3,092,034
Ensembl chrNW_004936664:3,083,602...3,092,308 		JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:646,019...1,120,426
Ensembl chrNW_004936548:645,925...1,121,888 		JBrowse link
G Klhl41 kelch like family member 41 located_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936509:47,298...62,608
Ensembl chrNW_004936509:47,463...66,556 		JBrowse link
G LOC101955706 peptidyl-prolyl cis-trans isomerase FKBP1A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:3,884,704...3,885,255 JBrowse link
G LOC101960259 carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936831:271,604...591,461
Ensembl chrNW_004936831:583,823...588,524
Ensembl chrNW_004936831:583,823...588,524 		JBrowse link
G Mrln myoregulin located_in ISO (PMID:25640239) MGI PMID:25640239 NCBI chrNW_004936614:3,217,820...3,229,048 JBrowse link
G Nos1 nitric oxide synthase 1 located_in ISO (PMID:19800018) BHF-UCL PMID:19800018 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414 		JBrowse link
G Pln phospholamban located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936658:1,443,626...1,453,770
Ensembl chrNW_004936658:1,443,795...1,453,839 		JBrowse link
G Reep5 receptor accessory protein 5 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936531:7,055,841...7,103,810
Ensembl chrNW_004936531:7,053,039...7,104,288 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936801:1,185,615...1,298,416
Ensembl chrNW_004936801:1,185,733...1,298,289 		JBrowse link
G Ryr2 ryanodine receptor 2 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936484:15,402,488...15,825,410
Ensembl chrNW_004936484:15,403,819...15,824,441 		JBrowse link
G Ryr3 ryanodine receptor 3 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936673:2,078,095...2,434,872
Ensembl chrNW_004936673:1,932,755...2,434,066 		JBrowse link
G Slc30a7 solute carrier family 30 member 7 located_in ISO PMID:28232492 UniProt PMID:28232492 RGD:155888558 NCBI chrNW_004936748:910,542...985,601
Ensembl chrNW_004936748:910,511...987,094 		JBrowse link
G Stim1 stromal interaction molecule 1 located_in ISO (PMID:25326555) UniProt PMID:25326555 NCBI chrNW_004936498:849,775...1,063,552
Ensembl chrNW_004936498:849,739...1,063,552 		JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 located_in ISO (PMID:26816378) UniProt PMID:26816378 Ensembl chrNW_004936519:2,664,278...2,666,850 JBrowse link
G Tmem38a transmembrane protein 38A located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936596:3,965,220...3,984,120
Ensembl chrNW_004936596:3,965,203...3,984,006 		JBrowse link
terminal cisterna term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 ISO RGD PMID:11010809 RGD:2313244 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G Rtn2 reticulon 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,913,852...1,922,982
Ensembl chrNW_004936706:1,913,842...1,922,772 		JBrowse link
G Ryr1 ryanodine receptor 1 located_in ISO PMID:11316255 UniProt PMID:11316255 RGD:12903237 NCBI chrNW_004936801:1,185,615...1,298,416
Ensembl chrNW_004936801:1,185,733...1,298,289 		JBrowse link
terminal cisterna lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18226
    cellular anatomical structure 18005
      cytoplasm 10327
        sarcoplasm 91
          junctional membrane complex 9
          sarcoplasmic reticulum + 67
Path 2
Term Annotations click to browse term
  cellular_component 18226
    cellular anatomical structure 18005
      intracellular anatomical structure 14387
        cytoplasm 10327
          sarcoplasm 91
            junctional membrane complex 9
            sarcoplasmic reticulum + 67
paths to the root