Casq2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 13,419,602 - 13,487,289 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936627 | 1,001,678 - 1,069,438 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936627 | 1,001,681 - 1,069,377 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CASQ2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 115,700,021 - 115,768,714 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 115,698,038 - 115,837,921 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 116,242,642 - 116,311,335 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 116,044,147 - 116,112,929 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 115,954,684 - 116,023,312 | NCBI | | | | | Celera | 1 | 114,471,445 - 114,540,231 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p13.1 | NCBI | | | | | HuRef | 1 | 114,100,712 - 114,169,492 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 116,357,421 - 116,426,262 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 115,707,724 - 115,776,700 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Casq2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 101,993,731 - 102,053,830 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 101,993,731 - 102,053,830 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 102,086,415 - 102,146,514 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 102,086,415 - 102,146,514 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 101,890,433 - 101,950,437 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 102,205,026 - 102,275,310 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 104,291,185 - 104,350,741 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | F2.2 | NCBI | | | | | cM Map | 3 | 44.3 | NCBI | | | | |
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Casq2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 192,214,556 - 192,270,821 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 189,526,003 - 189,582,276 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 189,525,960 - 189,582,267 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 197,154,083 - 197,210,463 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 195,012,238 - 195,067,913 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 189,839,671 - 189,896,025 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 204,512,361 - 204,568,643 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 204,512,302 - 204,568,656 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 223,945,611 - 224,001,893 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 197,182,938 - 197,239,201 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 197,145,718 - 197,201,199 (+) | NCBI | | | | | Celera | 2 | 181,958,395 - 182,014,660 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q34 | NCBI | | | | |
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Casq2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955435 | 18,941,936 - 18,996,200 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955435 | 18,941,975 - 18,996,027 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CASQ2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 108,347,728 - 108,421,140 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 107,950,341 - 108,020,647 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 86,795,392 - 86,864,196 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 121,844,494 - 121,913,311 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 121,844,097 - 121,913,311 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CASQ2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 17 | 53,233,966 - 53,299,093 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 53,224,438 - 53,299,708 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 52,883,024 - 52,948,138 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 54,114,995 - 54,180,159 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 54,115,013 - 54,180,265 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 53,153,853 - 53,218,892 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 53,188,593 - 53,253,716 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 53,761,968 - 53,827,341 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CASQ2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 104,918,221 - 104,984,020 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 104,918,204 - 104,984,019 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 115,007,604 - 115,070,817 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CASQ2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 17,937,089 - 18,008,433 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 17,937,524 - 18,008,786 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 20,654,546 - 20,724,412 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Casq2 (Heterocephalus glaber - naked mole-rat) |
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