Oprm1 (opioid receptor mu 1) - Rat Genome Database

Name: Oprm1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Oprm1 (opioid receptor mu 1) Ictidomys tridecemlineatus

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Symbol:

Oprm1

Name:

opioid receptor mu 1

RGD ID:

12603049

Description:

ENCODES a protein that exhibits G protein-coupled opioid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); amphetamine abuse (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); dendrite cytoplasm (ortholog); dendrite membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

mu-type opioid receptor; opioid receptor mu 1, transcript variant X1; opioid receptor mu 1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	OPRM1 (opioid receptor mu 1)	NCBI	Ortholog
Mus musculus (house mouse):	Oprm1 (opioid receptor, mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Oprm1 (opioid receptor, mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Oprm1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	OPRM1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	OPRM1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	OPRM1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	OPRM1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Oprm1 (opioid receptor mu 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	139,253,997 - 139,325,813 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	6,506,207 - 6,548,946 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	6,506,207 - 6,567,136 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

AIDS Dementia Complex (ISO)

alcohol dependence (ISO)

alcohol use disorder (ISO)

amphetamine abuse (ISO)

anxiety disorder (ISO)

autism spectrum disorder (ISO)

autosomal recessive spinocerebellar ataxia 8 (ISO)

brain ischemia (ISO)

chromosome 6q24-q25 deletion syndrome (ISO)

cocaine dependence (ISO)

Cocaine-Related Disorders (ISO)

Constipation (ISO)

drug dependence (ISO)

drug psychosis (ISO)

Dyskinesias (ISO)

epilepsy (ISO)

Experimental Diabetes Mellitus (ISO)

extrahepatic cholestasis (ISO)

hepatic encephalopathy (ISO)

hepatitis C (ISO)

heroin dependence (ISO)

human immunodeficiency virus infectious disease (ISO)

Hyperalgesia (ISO)

Hyperphagia (ISO)

Inflammation (ISO)

morphine dependence (ISO)

morphine withdrawal syndrome (ISO)

movement disease (ISO)

Nausea (ISO)

neonatal abstinence syndrome (ISO)

Neuralgia (ISO)

nicotine dependence (ISO)

obesity (ISO)

opiate dependence (ISO)

opioid abuse (ISO)

Orthostatic Hypotension (ISO)

Pain (ISO)

post-traumatic stress disorder (ISO)

Pruritus (ISO)

Reperfusion Injury (ISO)

respiratory failure (ISO)

rheumatoid arthritis (ISO)

schizophrenia (ISO)

sciatic neuropathy (ISO)

stress-related disorder (ISO)

substance-induced psychosis (ISO)

substance-related disorder (ISO)

viral encephalitis (ISO)

withdrawal disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acute inflammatory response to antigenic stimulus (ISO)

adenylate cyclase-activating dopamine receptor signaling pathway (ISO)

adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ISO)

adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ISO)

adenylate cyclase-inhibiting opioid receptor signaling pathway (ISO)

behavioral response to ethanol (IEA)

cellular response to morphine (IEA)

eating behavior (ISO)

estrous cycle (ISO)

excitatory postsynaptic potential (ISO)

G protein-coupled opioid receptor signaling pathway (IEA)

G protein-coupled receptor signaling pathway (IEA,ISO)

locomotory behavior (ISO)

negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ISO)

negative regulation of cAMP-mediated signaling (ISO)

negative regulation of cytosolic calcium ion concentration (ISO)

negative regulation of luteinizing hormone secretion (ISO)

negative regulation of nitric oxide biosynthetic process (ISO)

negative regulation of Wnt protein secretion (IEA)

neuropeptide signaling pathway (IEA)

phospholipase C-activating G protein-coupled receptor signaling pathway (ISO)

positive regulation of appetite (ISO)

positive regulation of cAMP-mediated signaling (ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of ERK1 and ERK2 cascade (ISO)

positive regulation of gluconeogenesis (ISO)

positive regulation of neurogenesis (ISO)

positive regulation of nitric oxide biosynthetic process (ISO)

presynaptic modulation of chemical synaptic transmission (ISO)

regulation of cellular response to stress (IEA)

regulation of NMDA receptor activity (ISO)

response to cocaine (ISO)

response to ethanol (ISO)

response to food (ISO)

response to growth factor (ISO)

response to lipopolysaccharide (ISO)

sensory perception of pain (IEA)

social behavior (ISO)

sperm ejaculation (ISO)

transmission of nerve impulse (ISO)

Cellular Component

axon (IEA)

cell projection (IEA)

dendrite (IEA,ISO)

dendrite cytoplasm (ISO)

dendrite membrane (ISO)

endosome (IEA)

focal adhesion (ISO)

GABA-ergic synapse (ISO)

membrane (IEA)

mitochondrion (ISO)

neuron projection (IEA)

perikaryon (IEA,ISO)

plasma membrane (IEA)

postsynaptic membrane (ISO)

presynaptic membrane (ISO)

sarcolemma (ISO)

sarcoplasmic reticulum (ISO)

spine apparatus (ISO)

T-tubule (ISO)

Molecular Function

beta-endorphin receptor activity (IEA)

G protein-coupled opioid receptor activity (ISO)

G protein-coupled receptor activity (IEA,ISO)

G-protein alpha-subunit binding (IEA)

G-protein beta-subunit binding (IEA,ISO)

morphine receptor activity (IEA,ISO)

neuropeptide binding (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

voltage-gated calcium channel activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

alfentanil pharmacodynamics pathway (ISO)

bupivacaine pharmacodynamics pathway (ISO)

buprenorphine pharmacodynamics pathway (ISO)

chloroprocaine pharmacodynamics pathway (ISO)

citalopram pharmacodynamics pathway (ISO)

cocaine pharmacodynamics pathway (ISO)

codeine and morphine pharmacodynamics pathway (ISO)

codeine and morphine pharmacokinetics pathway (ISO)

desipramine pharmacodynamics pathway (ISO)

diphenoxylate pharmacodynamics pathway (ISO)

escitalopram pharmacodynamics pathway (ISO)

ethylmorphine pharmacodynamics pathway (ISO)

fentanyl pharmacodynamics pathway (ISO)

fluoxetine pharmacodynamics pathway (ISO)

heroin pharmacodynamics pathway (ISO)

heroin pharmacokinetics pathway (ISO)

hydrocodone pharmacodynamics pathway (ISO)

hydromorphone pharmacodynamics pathway (ISO)

imipramine pharmacodynamics pathway (ISO)

interleukin-4 signaling pathway (ISO)

levacetylmethadol pharmacodynamics pathway (ISO)

levobupivacaine phgarmacodynamics pathway (ISO)

levorphanol pharmacodynamics pathway (ISO)

lidocaine pharmacodynamics pathway (ISO)

mepivacaine pharmacodynamics pathway (ISO)

methadone pharmacodynamics pathway (ISO)

methadone pharmacokinetics pathway (ISO)

nalbuphine pharmacodynamics pathway (ISO)

naloxone pharmacodynamics pathway (ISO)

naltrexone pharmacodynamics pathway (ISO)

nicotine pharmacodynamics pathway (ISO)

oxybuprocaine pharmacodynamics pathway (ISO)

oxycodone pharmacodynamics pathway (ISO)

oxymorphone pharmacodynamics pathway (ISO)

pentazocine pharmacodynamics pathway (ISO)

prilocaine pharmacodynamics pathway (ISO)

procaine pharmacodynamics pathway (ISO)

remifentanil pharmacodynamics pathway (ISO)

ropivacaine pharmacodynamics pathway (ISO)

tramadol pharmacodynamics pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Oprm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	139,253,997 - 139,325,813 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	6,506,207 - 6,548,946 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	6,506,207 - 6,567,136 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OPRM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	154,010,496 - 154,246,867 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	154,010,496 - 154,246,867 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	154,331,631 - 154,568,001 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	154,402,136 - 154,609,693 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	154,452,556 - 154,660,114	NCBI
Celera	6	155,066,098 - 155,302,376 (+)	NCBI		Celera
Cytogenetic Map	6	q25.2	NCBI
HuRef	6	151,895,214 - 152,131,143 (+)	NCBI		HuRef
CHM1_1	6	154,595,701 - 154,831,638 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	155,212,511 - 155,448,859 (+)	NCBI		T2T-CHM13v2.0

Oprm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	6,708,593 - 6,988,209 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	6,708,506 - 6,988,198 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	6,758,593 - 7,038,209 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	6,758,506 - 7,038,198 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	3,308,332 - 3,557,940 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	3,309,340 - 3,557,732 (-)	NCBI		MGSCv36	mm8
Celera	10	6,736,075 - 7,000,690 (+)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	1.85	NCBI

Oprm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	45,565,371 - 45,818,722 (+)	NCBI		GRCr8
mRatBN7.2	1	43,160,057 - 43,413,409 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	43,160,057 - 43,413,409 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	43,700,986 - 43,954,675 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	49,688,216 - 49,941,908 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	43,776,469 - 44,030,156 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	43,454,803 - 43,704,948 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	43,454,803 - 43,704,948 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	44,804,181 - 45,034,145 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	37,535,416 - 37,779,392 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	37,538,384 - 37,591,800 (+)	NCBI
Celera	1	38,804,246 - 39,057,359 (+)	NCBI		Celera
RH 3.4 Map	1	468.6	RGD
Cytogenetic Map	1	q11	NCBI

Oprm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	7,757,569 - 7,923,817 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955439	7,870,563 - 7,923,817 (-)	NCBI	ChiLan1.0	ChiLan1.0

OPRM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	174,001,918 - 174,144,256 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	171,893,526 - 172,035,890 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	151,827,323 - 151,937,658 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	156,517,666 - 156,627,758 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	156,517,661 - 157,088,251 (+)	Ensembl	panpan1.1		panPan2

OPRM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	43,972,915 - 44,037,477 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	43,972,219 - 44,141,238 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	44,810,592 - 44,875,131 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	44,157,040 - 44,221,809 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	44,156,501 - 44,325,450 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	44,023,836 - 44,088,390 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	43,896,066 - 43,961,450 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	44,471,346 - 44,490,044 (+)	NCBI		UU_Cfam_GSD_1.0

OPRM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	12,528,672 - 12,702,443 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	12,634,125 - 12,702,295 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	14,770,415 - 14,819,354 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	1	p	NCBI

OPRM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	81,568,295 - 81,650,005 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	81,568,732 - 81,625,088 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	53,917,647 - 54,030,223 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Oprm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624785	4,032,689 - 4,196,186 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624785	4,147,079 - 4,195,712 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005321386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005733036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000000418 ⟹ ENSSTOP00000000375

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936489	6,506,207 - 6,548,946 (+)	Ensembl

RefSeq Acc Id:

XM_005321386 ⟹ XP_005321443

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	139,253,997 - 139,325,813 (+)	NCBI
SpeTri2.0	NW_004936489	6,506,207 - 6,567,136 (+)	NCBI

Sequence:

show sequence

GGACGTGCCTCTGTGTACTACTAAAGTGGGAGGGGGCAGCAAGCGGAAGATCATGTCAGATGCA
GCTTCCCCCTTCTGCCTGACGCTCCCCTCTGGTTCCGCCAGAGTTGGTCCCTGTAAGAAATAGC
CGGAGCTGTAGCCGCGGCGAGAGAGAGCGGCTGAGGCGCGTGGAACCCGAAAAGTCCGGGAGCT
CCGGGTTACCTCGCGTCCTGGTCCCCGGCAGGCCGTCAGCACCATGGACAGCAGCGCCGTCCCC
GCGAACGCCAGCAACTGCAGCGATCCCTTCCCGCGGTCGAGTTGCCCCCCAGCACCGAGCACCA
GTTCCTGGGTCAACTTGTCCCACTTTGATGGCAACCTGTCCGACCCGTGCGGTCCGAACCGCAC
CGAGCTGGGCGGGAGCGGCGGCCAGTGCCCTCCGTCCGGCAGTCCTTCCATGATCACGGCCATC
ACCATCATGGCCCTCTACTCCATCGTGTGTGTGGTGGGGCTCTTCGGAAACTTCCTGGTCATGT
ACGTGATCGTCAGATACACCAAAATGAAGACTGCCACCAATATCTACATTTTCAACCTTGCTCT
AGCAGATGCCCTGGCGACCAGCACCCTGCCCTTCCAGAGTGTCAATTACCTAATGGGAACGTGG
CCGTTTGGCACCATCCTTTGCAAGATTGTGATCTCCATCGATTACTACAACATGTTCACCAGCA
TATTCACCCTCTGCACCATGAGTGTGGATCGCTACATCGCAGTCTGCCACCCAGTCAAGGCCCT
GGATTTCCGTACTCCCCGAAATGCCAAAATTGTCAACATCTGCAACTGGATTCTCTCTTCTGCC
ATTGGTCTGCCTGTGATGTTCATGGCAACAACAAAATACAGGCAGGGTTCCATAGACTGCACCC
TGACGTTCTCTCACCCGACCTGGTACTGGGAGAACCTGCTGAAGATCTGTGTTTTCATCTTTGC
CTTCATCATGCCCGTGCTCATCATCACCGTGTGCTACGGGCTGATGATCTTGCGCCTCAAGAGT
GTCCGCATGCTCTCGGGCTCCAAAGAAAAGGACCGGAACCTGCGGCGCATCACCAGGATGGTGC
TGGTGGTGGTGGCGGTGTTCATCGTCTGCTGGACGCCCATCCACATTTACGTCATCGTCAAGGC
CTTGATCACCATCCCAGAAACCACGTTCCAGACGGTCTCCTGGCACTTCTGCATTGCTCTGGGT
TACACAAACAGCTGCCTGAACCCAGTCCTTTATGCATTTCTGGATGAAAACTTCAAACGATGCT
TCAGAGAATTCTGTATCCCAACCTCTTCCACCATCGAGCAACAAAACTCCACTCGAATCCGTCA
GAACACTAGAGACCACCCCTCCACAGCCAATACGGTGGACAGGACCAACCATCAGCTAGAAAAT
CTGGAAGCAGAAACCGCTCCTCTGCCCTAATGGGGTCTCCTGCCATTCAGAGCCTCCCTGAGCT
TAGAAGCCTCTATCTATGTGGAAACGAGTCACTGTGAGATGGACAGGAGCCTGAGATTCCTAGG
CAAGCGCCTGCTTCCGAGTCCTCCAGTCTGTCCTCTCTGGCTTCCCCACTCTGCACCTTATAGG
GACATGCAAACTCTATCAAGCCCTTGAAAGGAAAAGAGTACATCCCACCCATGACCCCGGCTTG
AGTACATCATCACAAGGAAGTCGCCCGAGGGGACCACAGTCTGCCGTGGTATGTGAATTGGGGT
CATCGTTGATGGTGGCCCTTCTGTACTTACTATT

hide sequence

RefSeq Acc Id:

XR_005733036

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	139,253,997 - 139,325,813 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005321443	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000375.3
GenBank Protein	KAG3290478	(Get FASTA)	NCBI Sequence Viewer
	KAG3290479	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005321443 ⟸ XM_005321386

- UniProtKB:

I3LWL0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDSSAVPANASNCSDPFPRSSCPPAPSTSSWVNLSHFDGNLSDPCGPNRTELGGSGGQCPPSGS
PSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSV
NYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNIC
NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGL
MILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIVKALITIPETTFQTVSW
HFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSSTIEQQNSTRIRQNTRDHPSTANTVDR
TNHQLENLEAETAPLP

hide sequence

Ensembl Acc Id:

ENSSTOP00000000375 ⟸ ENSSTOT00000000418

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000418	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000418.3	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Mu_opioid_rcpt	UniProtKB/TrEMBL
	Opioid_rcpt	UniProtKB/TrEMBL
NCBI Gene	Oprm1	ENTREZGENE
PANTHER	MU-TYPE OPIOID RECEPTOR	UniProtKB/TrEMBL
	NEUROPEPTIDES RECEPTOR	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	MUOPIOIDR	UniProtKB/TrEMBL
	OPIOIDR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	I3LWL0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Annotations - SMPDB

Imported Annotations - PID (archival)