Ca4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 35,301,294 - 35,310,173 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936490 | 1,764,795 - 1,774,645 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936490 | 1,764,845 - 1,773,752 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CA4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 60,149,973 - 60,179,021 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 60,149,942 - 60,170,899 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 58,227,334 - 58,256,382 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 55,582,131 - 55,591,686 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 55,582,130 - 55,591,686 | NCBI | | | | | Celera | 17 | 54,687,198 - 54,696,791 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | q23.1 | NCBI | | | | | HuRef | 17 | 53,598,240 - 53,607,844 (+) | NCBI | | HuRef | | | CHM1_1 | 17 | 58,291,334 - 58,300,936 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 61,018,933 - 61,047,969 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Car4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 84,848,580 - 84,856,880 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 84,848,612 - 84,856,870 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 84,957,754 - 84,966,054 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 84,957,786 - 84,966,044 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 84,771,256 - 84,779,556 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 84,774,038 - 84,782,239 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 94,577,982 - 94,586,281 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | C | NCBI | | | | | cM Map | 11 | 51.34 | NCBI | | | | |
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Car4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 70,325,102 - 70,333,916 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 69,827,945 - 69,836,501 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 69,827,945 - 69,836,501 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 74,447,929 - 74,456,487 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 73,952,696 - 73,961,254 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 69,417,368 - 69,425,928 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 72,272,286 - 72,281,069 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 72,272,248 - 72,281,067 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 72,173,022 - 72,188,138 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 73,229,211 - 73,237,707 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 73,243,580 - 73,252,077 (+) | NCBI | | | | | Celera | 10 | 68,755,736 - 68,764,294 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26 | NCBI | | | | |
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Ca4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955451 | 1,486,010 - 1,494,084 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955451 | 1,485,939 - 1,493,249 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CA4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 19 | 76,333,203 - 76,361,305 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 81,143,962 - 81,166,490 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 54,236,114 - 54,258,638 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
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CA4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 36,327,919 - 36,337,103 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 36,327,969 - 36,337,088 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 35,555,114 - 35,563,663 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 37,140,849 - 37,149,372 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 37,140,894 - 37,150,309 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 35,919,574 - 35,928,095 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 36,206,744 - 36,215,265 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 36,294,940 - 36,303,505 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CA4 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 12 | 37,962,943 - 37,972,509 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 37,962,951 - 37,972,443 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 39,632,792 - 39,642,290 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CA4 (Chlorocebus sabaeus - green monkey) |
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Ca4 (Heterocephalus glaber - naked mole-rat) |
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