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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:phencyclidine abuse
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Accession:DOID:5062 term browser browse the term
Definition:A substance abuse that involves the recurring use of phencyclidine (PCP) drugs despite negative consequences. (DO)
Synonyms:exact_synonym: Angel Dust Abuse;   PCP abuse;   phencyclidine abuses;   phencyclidine use disorder;   phencyclidine-related disorder;   phencyclidine-related disorders
 primary_id: MESH:D010623
 xref: EFO:0007436
For additional species annotation, visit the Alliance of Genome Resources.

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phencyclidine abuse term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G APOL2 apolipoprotein L2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr19:18,945,972...18,956,039 JBrowse link
G R Apol2 apolipoprotein L2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:109,331,367...109,338,632
Ensembl chr 7:109,331,392...109,338,558 		JBrowse link
G H APOL2 apolipoprotein L2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr22:36,226,209...36,239,954
Ensembl chr22:36,226,209...36,239,954 		JBrowse link
G M Apol8 apolipoprotein L 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr15:77,629,309...77,641,306
Ensembl chr15:77,631,998...77,641,203 		JBrowse link
G N Calm1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G G CALM1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr24:68,133,446...68,145,117
Ensembl chr24:68,133,428...68,145,180 		JBrowse link
G P CALM1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744 		JBrowse link
G S Calm1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936488:17,580,425...17,588,480
Ensembl chrNW_004936488:17,580,454...17,588,507 		JBrowse link
G D CALM1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195 		JBrowse link
G B CALM1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:71,015,099...71,026,322
Ensembl chr19:52,121,687...52,131,135 		JBrowse link
G C Calm1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028 		JBrowse link
G R Calm1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G M Calm1 calmodulin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G H CALM1 calmodulin 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:90,396,502...90,408,268
Ensembl chr14:90,396,502...90,408,268 		JBrowse link
G N Calm2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G G CALM2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:60,027,884...60,042,041
Ensembl chr14:60,027,801...60,044,951
Ensembl chr 6:60,027,801...60,044,951
Ensembl chr24:60,027,801...60,044,951 		JBrowse link
G P CALM2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218 		JBrowse link
G S Calm2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936508:5,207,909...5,223,780
Ensembl chrNW_004936508:5,207,904...5,223,780 		JBrowse link
G D CALM2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457 		JBrowse link
G B CALM2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr2A:47,274,722...47,290,861
Ensembl chr2A:48,204,518...48,220,697 		JBrowse link
G C Calm2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955441:13,973,147...13,988,665
Ensembl chrNW_004955574:672,300...680,924
Ensembl chrNW_004955438:672,300...680,924 		JBrowse link
G R Calm2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G M Calm2 calmodulin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G H CALM2 calmodulin 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 2:47,160,082...47,176,936
Ensembl chr 2:47,160,084...47,176,921 		JBrowse link
G N Camk2b calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624740:7,750,327...7,828,891
Ensembl chrNW_004624740:7,750,245...7,831,454 		JBrowse link
G G CAMK2B calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr21:14,342,751...14,451,274
Ensembl chr21:14,342,892...14,451,282 		JBrowse link
G P CAMK2B calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr18:50,862,225...50,956,263
Ensembl chr18:50,861,466...50,956,225 		JBrowse link
G S Camk2b calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936478:19,183,493...19,278,457
Ensembl chrNW_004936478:19,180,726...19,278,920 		JBrowse link
G D CAMK2B calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118
G B CAMK2B calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:44,930,859...45,040,078
Ensembl chr 7:45,001,267...45,110,342 		JBrowse link
G C Camk2b calcium/calmodulin dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955456:7,711,583...7,760,506
Ensembl chrNW_004955456:7,713,552...7,760,207 		JBrowse link
G R Camk2b calcium/calmodulin-dependent protein kinase II beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994 		JBrowse link
G M Camk2b calcium/calmodulin-dependent protein kinase II, beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr11:5,919,642...6,016,401
Ensembl chr11:5,919,644...6,016,362 		JBrowse link
G H CAMK2B calcium/calmodulin dependent protein kinase II beta EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:44,217,154...44,326,013
Ensembl chr 7:44,210,019...44,334,577 		JBrowse link
G N Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624758:25,340,142...25,363,669
Ensembl chrNW_004624758:25,340,074...25,366,299 		JBrowse link
G G FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 8:7,272,580...7,306,859
Ensembl chr 8:7,271,509...7,306,760 		JBrowse link
G P FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:14,976,259...15,010,701
Ensembl chr14:14,967,074...15,016,227 		JBrowse link
G S Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936628:3,599,435...3,600,061 JBrowse link
G D FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr25:26,060,031...26,093,515
Ensembl chr25:26,060,386...26,093,582 		JBrowse link
G B FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 8:7,363,250...7,399,863 JBrowse link
G C Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955403:53,068,011...53,081,499
Ensembl chrNW_004955403:53,067,637...53,081,499 		JBrowse link
G R Fdft1 farnesyl diphosphate farnesyl transferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287 		JBrowse link
G M Fdft1 farnesyl diphosphate farnesyl transferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:63,382,599...63,419,136
Ensembl chr14:63,382,599...63,417,027 		JBrowse link
G H FDFT1 farnesyl-diphosphate farnesyltransferase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 8:11,795,582...11,839,298
Ensembl chr 8:11,795,573...11,839,395 		JBrowse link
G N Gcc1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624783:8,363,442...8,368,194
Ensembl chrNW_004624783:8,363,450...8,369,695 		JBrowse link
G G GCC1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr21:96,395,819...96,400,817
Ensembl chr21:96,397,199...96,400,682 		JBrowse link
G P GCC1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr18:20,701,685...20,708,053
Ensembl chr18:20,701,737...20,707,138 		JBrowse link
G S Gcc1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936479:14,782,595...14,788,089
Ensembl chrNW_004936479:14,782,455...14,788,230 		JBrowse link
G D GCC1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:8,738,379...8,743,623
Ensembl chr14:8,737,838...8,742,022 		JBrowse link
G B GCC1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:119,575,802...119,581,401
Ensembl chr 7:132,231,077...132,236,053 		JBrowse link
G C Gcc1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955479:8,636,274...8,642,027
Ensembl chrNW_004955479:8,635,114...8,642,027 		JBrowse link
G R Gcc1 GRIP and coiled-coil domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 4:57,030,817...57,042,682
Ensembl chr 4:57,032,314...57,042,663 		JBrowse link
G M Gcc1 golgi coiled coil 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 6:28,413,784...28,424,152
Ensembl chr 6:28,416,090...28,428,389 		JBrowse link
G H GCC1 GRIP and coiled-coil domain containing 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 7:127,580,628...127,585,596
Ensembl chr 7:127,580,628...127,593,611 		JBrowse link
G P LOC100156062 apolipoprotein L3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 5:11,543,551...11,567,675 JBrowse link
G B LOC100982122 apolipoprotein L2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr22:17,172,486...17,186,260
Ensembl chr22:35,011,137...35,024,913 		JBrowse link
G N Scarb1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004624747:23,970,782...24,010,683
Ensembl chrNW_004624747:23,973,648...24,010,820 		JBrowse link
G G SCARB1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr11:120,134,485...120,223,512
Ensembl chr11:120,134,874...120,216,904 		JBrowse link
G P SCARB1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr14:28,301,421...28,393,568
Ensembl chr14:28,301,294...28,393,568 		JBrowse link
G S Scarb1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G D SCARB1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr26:5,035,797...5,122,383
Ensembl chr26:5,049,407...5,121,468 		JBrowse link
G B SCARB1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr12:122,293,803...122,455,314
Ensembl chr12:126,659,532...126,694,767 		JBrowse link
G C Scarb1 scavenger receptor class B member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chrNW_004955482:4,813,502...4,836,479
Ensembl chrNW_004955482:4,813,955...4,837,392 		JBrowse link
G R Scarb1 scavenger receptor class B, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
G M Scarb1 scavenger receptor class B, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr 5:125,354,151...125,418,082
Ensembl chr 5:125,354,151...125,418,158 		JBrowse link
G H SCARB1 scavenger receptor class B member 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17205118 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 253232
    Chemically-Induced Disorders 13790
      substance-related disorder 7381
        phencyclidine abuse 66
Path 2
Term Annotations click to browse term
  disease 253232
    disease of anatomical entity 242596
      nervous system disease 175361
        central nervous system disease 146124
          brain disease 137205
            disease of mental health 102453
              substance-related disorder 7381
                substance abuse 2334
                  phencyclidine abuse 66
paths to the root