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Gene: Calm1 (calmodulin 1) Chinchilla lanigera

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Symbol:

Calm1

Name:

calmodulin 1

RGD ID:

8824130

Description:

ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH achondrogenesis type IA (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

calmodulin; calmodulin 1 (phosphorylase kinase, delta)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CALM1 (calmodulin 1)	NCBI	Ortholog
Mus musculus (house mouse):	Calm1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Calm1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CALM1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CALM1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Calm1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CALM1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CALM1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Calm1 (calmodulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	12,842,437 - 12,854,028 (+)	Ensembl
ChiLan1.0	NW_004955438	12,842,437 - 12,854,028 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

achondrogenesis type IA (ISO)

alcohol dependence (ISO)

alcohol withdrawal syndrome (ISO)

Alzheimer's disease (ISO)

cannabis abuse (ISO)

catecholaminergic polymorphic ventricular tachycardia (ISO)

catecholaminergic polymorphic ventricular tachycardia 1 (ISO)

catecholaminergic polymorphic ventricular tachycardia 4 (ISO)

Cocaine-Related Disorders (ISO)

long QT syndrome (ISO)

long QT syndrome 14 (ISO)

phencyclidine abuse (ISO)

type 2 diabetes mellitus (ISO)

Weight Gain (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagosome membrane docking (ISO)

calcineurin-mediated signaling (ISO)

cell surface receptor signaling pathway via JAK-STAT (ISO)

cellular response to interferon-beta (ISO)

cellular response to type II interferon (ISO)

detection of calcium ion (ISO)

establishment of protein localization to membrane (ISO)

establishment of protein localization to mitochondrial membrane (ISO)

G2/M transition of mitotic cell cycle (ISO)

mitochondrion-endoplasmic reticulum membrane tethering (ISO)

negative regulation of high voltage-gated calcium channel activity (ISO)

negative regulation of ryanodine-sensitive calcium-release channel activity (ISO)

organelle localization by membrane tethering (ISO)

positive regulation of nitric-oxide synthase activity (ISO)

positive regulation of receptor signaling pathway via JAK-STAT (ISO)

presynaptic endocytosis (ISO)

regulation of cardiac muscle cell action potential (ISO)

regulation of cardiac muscle contraction (ISO)

regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (ISO)

regulation of cell communication by electrical coupling involved in cardiac conduction (ISO)

regulation of cytokinesis (ISO)

regulation of heart rate (ISO)

regulation of high voltage-gated calcium channel activity (ISO)

regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ISO)

regulation of ryanodine-sensitive calcium-release channel activity (ISO)

regulation of synaptic vesicle endocytosis (ISO)

regulation of synaptic vesicle exocytosis (ISO)

response to amphetamine (ISO)

response to calcium ion (ISO)

substantia nigra development (ISO)

Cellular Component

calcium channel complex (ISO)

calyx of Held (ISO)

catalytic complex (ISO)

centrosome (ISO)

chromatin (ISO)

cytoplasm (ISO)

growth cone (ISO)

mitochondrial membrane (ISO)

myelin sheath (ISO)

nucleus (ISO)

postsynaptic cytosol (ISO)

presynaptic cytosol (ISO)

protein-containing complex (ISO)

sarcomere (ISO)

Schaffer collateral - CA1 synapse (ISO)

sperm midpiece (ISO)

spindle microtubule (ISO)

spindle pole (ISO)

synaptic vesicle membrane (ISO)

voltage-gated potassium channel complex (ISO)

Molecular Function

adenylate cyclase activator activity (ISO)

adenylate cyclase binding (ISO)

calcium channel inhibitor activity (ISO)

calcium channel regulator activity (ISO)

calcium ion binding (ISO)

calcium-dependent protein binding (ISO)

nitric-oxide synthase binding (ISO)

nitric-oxide synthase regulator activity (ISO)

phosphatidylinositol 3-kinase binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

protein kinase binding (ISO)

protein phosphatase activator activity (ISO)

protein serine/threonine kinase activator activity (ISO)

titin binding (ISO)

transmembrane transporter binding (ISO)

type 3 metabotropic glutamate receptor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

acebutolol pharmacodynamics pathway (ISO)

adenosine monophosphate-activated protein kinase (AMPK) signaling pathway (ISO)

adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway (ISO)

amiodarone pharmacodynamics pathway (ISO)

amlodipine pharmacodynamics pathway (ISO)

atenolol pharmacodynamics pathway (ISO)

betaxolol pharmacodynamics pathway (ISO)

bisoprolol pharmacodynamics pathway (ISO)

bupranolol drug pathway (ISO)

bupranolol pharmacodynamics pathway (ISO)

calcium/calcium-mediated signaling pathway (ISO)

calcium/calmodulin dependent kinase 2 signaling pathway (ISO)

carvedilol pharmacodynamics pathway (ISO)

diltiazem pharmacodynamics pathway (ISO)

disopyramide pharmacodynamics pathway (ISO)

dobutamine pharmacodynamics pathway (ISO)

esmolol pharmacodynamics pathway (ISO)

flecainde pharmacodynamics pathway (ISO)

fosphenytoin pharmacodynamics pathway (ISO)

glycogen degradation pathway (ISO)

ibutilide pharmacodynamics pathway (ISO)

insulin responsive facilitative sugar transporter mediated glucose transport pathway (ISO)

isoprenaline pharmacodynamics pathway (ISO)

isradipine pharmacodynamics pathway (ISO)

levobunolol pharmacodynamics pathway (ISO)

lidocaine pharmacodynamics pathway (ISO)

metoprolol pharmacodynamics pathway (ISO)

mexiletine pharmacodynamics pathway (ISO)

N-cadherin signaling pathway (ISO)

nadolol pharmacodynamics pathway (ISO)

nebivolol pharmacodynamics pathway (ISO)

nifedipine pharmacodynamics pathway (ISO)

nimodipine pharmacodynamics pathway (ISO)

nisoldipine pharmacodynamics pathway (ISO)

nitrendipine pharmacodynamics pathway (ISO)

p38 MAPK signaling pathway (ISO)

penbutolol pharmacodynamics pathway (ISO)

phenytoin pharmacodynamics pathway (ISO)

pindolol pharmacodynamics pathway (ISO)

procainamide pharmacodynamics pathway (ISO)

propranolol pharmacodynamics pathway (ISO)

quinidine pharmacodynamics pathway (ISO)

sotalol pharmacodynamics pathway (ISO)

timolol pharmacodynamics pathway (ISO)

type II interferon signaling pathway (ISO)

vascular endothelial growth factor signaling pathway (ISO)

verapamil pharmacodynamics pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Calm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	12,842,437 - 12,854,028 (+)	Ensembl
ChiLan1.0	NW_004955438	12,842,437 - 12,854,028 (+)	NCBI	ChiLan1.0	ChiLan1.0

CALM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	90,396,502 - 90,408,268 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	90,396,502 - 90,408,268 (+)	Ensembl			hg38	GRCh38
GRCh37	14	90,862,846 - 90,874,612 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	89,933,126 - 89,944,363 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	89,933,129 - 89,944,148	NCBI
Celera	14	70,910,477 - 70,921,767 (+)	NCBI		Celera
Cytogenetic Map	14	q32.11	NCBI
HuRef	14	71,038,153 - 71,049,443 (+)	NCBI		HuRef
CHM1_1	14	90,801,276 - 90,812,578 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	84,621,229 - 84,632,993 (+)	NCBI		T2T-CHM13v2.0

Calm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	100,165,694 - 100,176,083 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	100,165,694 - 100,176,073 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	100,199,435 - 100,209,824 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	100,199,435 - 100,209,814 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	101,437,751 - 101,448,016 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	100,600,591 - 100,610,856 (+)	NCBI		MGSCv36	mm8
Celera	12	101,426,181 - 101,436,442 (+)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	50.43	NCBI

Calm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	125,217,191 - 125,227,855 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	125,217,246 - 125,225,381 (+)	Ensembl				GRCr8
mRatBN7.2	6	119,487,691 - 119,495,759 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	119,487,621 - 119,498,227 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	119,649,410 - 119,657,616 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	119,946,208 - 119,954,273 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	119,281,076 - 119,289,141 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	124,217,241 - 124,225,292 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	124,217,241 - 124,225,292 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	133,444,207 - 133,452,258 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	124,477,601 - 124,485,669 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	117,015,915 - 117,023,918 (+)	NCBI		Celera
RGSC_v3.1	6	124,481,414 - 124,491,549 (+)	NCBI
Cytogenetic Map	6	q32	NCBI

CALM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	91,541,950 - 91,553,249 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	90,758,463 - 90,769,755 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	71,015,099 - 71,026,322 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	90,367,086 - 90,378,361 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	52,121,687 - 52,131,135 (+)	Ensembl			panPan2	panpan1.1
PanPan1.1 Ensembl	2A	48,204,518 - 48,220,697 (-)	Ensembl			panPan2	panpan1.1

CALM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	61,398,231 - 61,408,874 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	61,398,244 - 61,406,195 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	60,978,989 - 60,989,622 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	61,672,887 - 61,680,835 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	61,672,892 - 61,683,535 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	61,353,922 - 61,364,539 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	61,402,765 - 61,413,376 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	61,731,734 - 61,739,644 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Calm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	14,480,463 - 14,488,619 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	17,580,454 - 17,588,507 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	17,580,425 - 17,588,480 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CALM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	112,160,806 - 112,171,744 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	112,160,823 - 112,171,754 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	118,728,008 - 118,738,940 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CALM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	68,133,446 - 68,145,117 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	68,133,428 - 68,145,180 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	55,415,057 - 55,426,335 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Calm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	12,030,001 - 12,041,772 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	12,030,264 - 12,041,682 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005390283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01035274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01035275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01024189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000016632 ⟹ ENSCLAP00000016468

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955438	12,842,437 - 12,854,028 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000016633 ⟹ ENSCLAP00000016469

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955438	12,843,132 - 12,850,542 (+)	Ensembl

RefSeq Acc Id:

XM_005390283 ⟹ XP_005390340

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955438	12,842,437 - 12,854,028 (+)	NCBI

Sequence:

show sequence

CGGCGCGCAGACTCGCGCTCCGACAGTGGTGCTGGGAGTCTCGTGGGTGCGGTGCCGTTACTCG
CAGTCGGGCGGTGGCGCGGGCGGCGGCGGCACAGCACAGAGCGCACACCGCGCCTTAGCAGCGG
TTGAAGCGGAGGCACCCCCGCCGTCACAGCCCTTGCGCTGGTGCATCCACCCTCGCGCGCTCTG
CTCTTCCTTCCTTCGCTCGCACCATGGCTGACCAGCTGACTGAAGAACAGATTGCTGAATTCAA
GGAAGCTTTCTCTCTATTCGATAAAGATGGTGACGGCACCATCACAACAAAGGAATTAGGAACT
GTCATGAGGTCACTGGGTCAAAACCCAACAGAAGCTGAACTGCAGGATATGATCAACGAAGTGG
ATGCTGATGGTAATGGCACCATTGACTTCCCAGAATTTTTAACTATGATGGCTAGAAAAATGAA
AGATACAGATAGCGAAGAAGAAATCCGTGAGGCATTCCGAGTCTTTGACAAGGATGGAAATGGT
TACATCAGTGCAGCGGAACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAGATGAAG
AAGTAGATGAAATGATCAGAGAAGCAGATATTGATGGAGATGGACAAGTCAACTATGAAGAATT
CGTACAGATGATGACTGCAAAATGAAGACCTACTTTCAGCTACTTTTTCCCCCCTCTAGAAGAA
TCAAATTGAATCTTTTACTTACCTCTTGCAAAAAAAAAGAAAAAAGTTCATTTATTCATTCTGT
TTCTATATAGCAAAACTGAATGTTAAAAAGTACCTTCTGTCCACACACAAAATCTGCATGTATT
GGTTGGTGGTCCTGTCCCCTAAAGATCAAGCTACACATCAGTTTTACAATATAAATAATTGTAC
TACCTTAATGATAAGGAAGCACTTAGTGGACTCCTTAAAGTTCCATTTGCTAATGATTAATACA
CTGTTTGGGCTGGCCAGTTTTTCATGCATGCAGCTTGACGATTGAGCACAGTCAAGCATTTGTA
TTAAAATCGAAAAACGAAAAAACGAATTCAAAACCTATTCAGATGGGTTCAAGTTTAATTAGTT
AGTACAAATAGTCATGGCTGGTTTACTGAAAACAAACACATTTAAAATGGGTTTACCTCAGGAC
GATGTGCAGAAAATGGGTGGAGGATAAACTGTCGAGATGCAGCCCCAGTGGTAGGCCGATCCTC
TTGTACTTCCCTGTGCTCCGGCCCATGGTGACAGTGACACACAGTGGTGGCAGGCCTCCGAATG
GGGGTTTAGCAATGTCTGCATTGTACTAAGGTGAAATGGGTGTCAGGCTGTCACACTCACAAAT
TTTTAATAAGAAATCTTTTACAAGGGAGCATCTTTGGACTCTGTTTTTAAAACCTCCTGAACCA
TGACTTGGAGCCGGCAGAGTAGGCTGTGGCTGTGGACTTCAGCACACCCGTCAACATTGCTGTT
CAAGAAATTACAATTTACGTCCATTCCAAGTTGTAAATGCTAGTCTTTTTTTTTTTTTTTTTTT
TCCAATAAAAAGACCATTAACTTAAAATGGTGTTAAATGCTTTGTAAAGCTGAGATCTAAAAGG
GGACAAGGCACTTGGAGGGGAGGCCAGTGCACATTTAAATGCCCACAGCCTAGTGATGGGTTTC
CCTCCCTCCCAAGATCCCAGCACCAACCTCTGAGCCTAAGACCCTGCCTCAAAGCAGGCACGTA
TTGGTCGCTTTACCACACTTAATCGACACGTAAGTCTAGTTGTGTTTTCTCTGGGGGGAGGGGG
GAGGCAAGTCACGGTAACTTACTGATCTATTGAGGCGGTAGAGCTCTTACTGAAGGAAAAAACC
ACTTTCTCAAGCATGTATTTAGGGGTTCTTCTCAATTGTGCTGCTGATTACCTGTTTCATGTAA
CTACTTGAGACCATCTGTGCAAGAGACATGATTTAGTGTGTCTGTAATTCAATCCTCGCCGTGT
GTGGTAGAAGCAGTAGTCCTTTTCTAACTAAGCCAGTCTCTTCATGCCTAAAAGACACTATCAG
CCCCCTTTATTTGCAGTTTAATTTATGATTATTACCTTAGCTTCGTTTTCCTTTCTTCTGTTTT
GGTTTAAAGTTGACTTGACTTTGGTTTTTCCCCCTCCCCCCCTCAAGTAGAACTAATGCTAAGC
CTCTGGCTGGAAAGTAAAACTCCGACCCAGAGTGAGTTTCGTGTCTAATTATAAACCTGTAACC
AAAACCCAGACATGCTGGTACTGGTCTTTGCAGTGGGATTGGTCCATTGAAAAAGCCCCCTTAC
AAGCATCCTGCATTTAGTGCAGGGCTCTTTTGAAATGAAGGCTGGATGTGCATTTTTCAGGGTG
TTAACTGGTTGTATCTTCTTAGCAAGGAGATTTGAGTTCTGTGTGTTTGTGTGGGTGGTTTTAA
TTTGCCAGGGGATGGTGGCAGGCTGCTAGCGGGCAGTGATGAGCTCTTGGCAGCCAAGTGGGTG
CATTCGGGGCTGATTTATAGAGACCCTTGGCTTCTCCTCCCTCTCCTACTCCCTGTCTTTCTGG
CATTTTGTAGCTTGTTAGATTTTCTGCCAGAGGGGTGGGTTAGAGCCGTGGAGAGGACACATTG
CCACCGTGCTACCAGTCCTTGGACTGCGTGGTTGGTAGAGGAGAGGTTGACCCCATGAAGTAAG
GTTGGCGTTCATAATTCTCTGAATCTGTGAGGAACACCTAAGAATCCCTTAGTGTTTCTGTTCT
GGTGAGATGGGGAGCTCTGAGGGCTCCTGTGCAAGTCTATGACCTGGGTGTTTCTCGTAGGGGG
TCAGGTAGCCCAGTTGGCCCGGTCGCAGGCCTGTGGTCAATGAATGACCTCTTGGTAGTTTCAA
GGGGGATGGGGGGTGACTTGTTTTTAAAGACTTCCCTTCTATCTTACCCTTTTACCAAGTCTTT
CTGGAAGCTGGGTGGACTCCATTTTAATAGTCCCACAGTGTATCCTGAAAGACGACCTTTGGAA
CAGGATCCTGTGTGGAAACCAGGGAATGCTGAGTTCCAGTTGGGAGCAGAGGTGGGGTAGTGTC
TCCTGGCGCCTTTCTCCTGGCACGTGGGGGCACGACCAGCCCAGGGGTTGGGCGGTAGCAGTCT
GTGAGTTAGGGAGAGGAAAGAGCTTGGTGTCATGGCACCTTCCTGTAAACTTGCCCCTACTTCT
AACTACTCTATAAATATATACATATATTTATATATATAAAAGTGACTAGTTTAACTGGCATCCT
GCTTTAGCCTGAGACTTGCCATAAGAAACTGCTGAGTACTTGGCAAACCTTTTCATAGTTTCGT
TCTCCATCTGTTCGGGGTAGGTGTTGAGCAAGGCAAATGGATCTCGATACTCAGATGGGCTTTT
GATGCACTGTTGCCAGGGAAGGCTTTTTCTGATTTTTTGACAAACAAATTTTTGCACACTTTAA
TTGGTGTCTTTCGGCAATTTGAACACATTGAAGATGAGCTATTGTACATATTTTTATATTCTCT
TTATAAATGCATGTCCGACTGTACTTGTAACAATATTGTAATGAATGGCTCTCCAGTAGGCCTA
GCGCTGCTGTCACATCAGAGGAATAGCATATTATTGGCCCCTCAGCATCCTGGGAACTGCTTCC
TGAACAAAGAATGTAAATTTGGTCAAGTCTACTCTTCATTCAATTATTTTAACCATTTGGATTA
TTTATTGTATATCCTAAATATATTTATCCTTTTGGCAGTGACTAGATCTCCACTAATGTGTCTT
AATCCCTTCAGCTGGCAGTTAACTATTTTTTTTTTAATCCCTTGAAGTTGTCCTATAGGAGACA
GATTCTTTGCTGTCTATTCCTGGGAGTGGGAAGGTAGTGGCATGGGTGGAGTGTGTGTTCTTTC
TCCAAATCTATTATAATGTTCATTAAACACTTCTGTAGCAAAGATGGTGGTGGTTCTTTCGTTA
CTGAAGTTGCCCTTCAACATGGCTATTTGAAAAGGAGATGTACTTGAACGTTTCTGTAAATCTT
GAGATGAACTGTTAACCACCTCTCTGATGGGGGACCAACTCTATGGAAATTGTAAATAAGTTTT
ATTTATAAACCTGGCACTGTATTCAATAAACATTTCTGCAGCCTTTCATCTCTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005390340	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005386.1
	ENSCLAP00000016468
	ENSCLAP00000016468.1
	ENSCLAP00000016469.1
	ENSCLAP00000025915.1

RefSeq Acc Id:	XP_005390340 ⟸ XM_005390283
- UniProtKB:	A0A8C2YQS9 (UniProtKB/TrEMBL), A0A8C2YVA7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE ADIDGDGQVNYEEFVQMMTAK hide sequence

Ensembl Acc Id:

ENSCLAP00000016469 ⟸ ENSCLAT00000016633

Ensembl Acc Id:

ENSCLAP00000016468 ⟸ ENSCLAT00000016632

Protein Domains

EF-hand

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003822	UniProtKB/TrEMBL
	ENSCLAG00000011322	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSCLAG00000018045	UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005482.1	UniProtKB/TrEMBL
	ENSCLAT00000016632	ENTREZGENE
	ENSCLAT00000016632.1	UniProtKB/TrEMBL
	ENSCLAT00000016633.1	UniProtKB/TrEMBL
	ENSCLAT00000026219.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	CALM/Myosin/TropC-like	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
NCBI Gene	Calm1	ENTREZGENE
PANTHER	CALMODULIN LIKE 3	UniProtKB/TrEMBL
	MYOSIN LIGHT CHAIN 1, 3	UniProtKB/TrEMBL
Pfam	EF-hand_7	UniProtKB/TrEMBL
PRINTS	RECOVERIN	UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
SMART	EFh	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8C2VJH9_CHILA	UniProtKB/TrEMBL
	A0A8C2YQS9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YVA7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Calm1	calmodulin 1		calmodulin 1 (phosphorylase kinase, delta)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)