miRNA Targets Report for gene Cdx1 | ||||||||||||||||||
Target Type | miRNA Gene RGD Id | miRNA Gene Symbol | Mature miRNA | Method Name | Result Type | Data Type | Support Type | PMID | Target Transcript Acc | Transcript Biotype | Isoform | Amplification | UTR Start | UTR End | Target Site | Score | Normalized Score | Energy |
predicted | 2314884 | Mir615 | rno-miR-615 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 60 | 67 | 8mer | 0.035433 | 0.071 | -18.90 | |||
predicted | 2314888 | Mir196a | rno-miR-196a-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 118 | 126 | Offset 1-7 8mer | 0.421608 | 0.843 | -15.10 | |||
predicted | 2325341 | Mir484 | rno-miR-484 | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 57 | 78 | 8mer | 148.000000 | 0.131 | ||||
predicted | 2325345 | Mir296 | rno-miR-296-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 68 | 90 | N/A | 0.054428 | 0.109 | ||||
predicted | 2325345 | Mir296 | rno-miR-296-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 48 | 68 | 8mer | 0.002258 | 0.004 | ||||
predicted | 2325346 | Mir195 | rno-miR-195-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 76 | 96 | 7mer-m8 | 0.167231 | 0.334 | ||||
predicted | 2325351 | Mir140 | rno-miR-140-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 109 | 115 | 8mer | 0.481147 | 0.962 | -15.20 | |||
predicted | 2325354 | Mir362 | rno-miR-362-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 4 | 27 | N/A | 162.000000 | 0.361 | -28.91 | |||
predicted | 2325354 | Mir362 | rno-miR-362-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 65 | 72 | 7mer-m8 | 0.424887 | 0.850 | -15.20 | |||
predicted | 2325361 | Mir181d | rno-miR-181d-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 21 | 43 | 7mer-m8 | 143.000000 | 0.049 | -15.31 | |||
predicted | 2325364 | Mir497 | rno-miR-497-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 74 | 96 | 7mer-m8 | 0.167231 | 0.334 | ||||
predicted | 2325365 | Mir378 | rno-miR-378a-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 14 | 22 | Offset 1-7 7mer-m8 | 0.170812 | 0.342 | ||||
predicted | 2325379 | Mir193 | rno-miR-193-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 60 | 67 | Offset 1-7 8mer | 0.411732 | 0.823 | -15.20 | |||
predicted | 2325381 | Mir181c | rno-miR-181c-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 21 | 43 | 7mer-m8 | 149.000000 | 0.148 | -13.46 | |||
predicted | 2325383 | Mir139 | rno-miR-139-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 107 | 115 | Offset 1-7 8mer | 0.456357 | 0.913 | -15.00 | |||
predicted | 2325390 | Mir92a1 | rno-miR-92a-1-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 4 | 12 | Offset 1-7 7mer-m8 | 0.290700 | 0.581 | -15.90 | |||
predicted | 2325395 | Mir23a | rno-miR-23a-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 60 | 67 | Offset 1-7 8mer | 0.097276 | 0.195 | -17.30 | |||
predicted | 2325404 | Mir328 | rno-miR-328a-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 60 | 66 | 7mer-m8 | 0.212145 | 0.424 | -16.50 | |||
predicted | 2325406 | Mir216a | rno-miR-216a-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 93 | 114 | 6mer | 148.000000 | 0.131 | ||||
predicted | 2325411 | Mir761 | rno-miR-761 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 72 | 94 | 7mer-m8 | 0.024900 | 0.050 | ||||
predicted | 2325414 | Mir490 | rno-miR-490-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 17 | 23 | Offset 3-9 7mer-m8 | 0.446152 | 0.892 | -15.20 | |||
predicted | 2325415 | Mir770 | rno-miR-770-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 61 | 68 | Offset 1-7 7mer-m8 | 0.019544 | 0.039 | -19.40 | |||
predicted | 2325418 | Mir196c | rno-miR-196c-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 118 | 126 | Offset 1-7 8mer | 0.421608 | 0.843 | -15.10 | |||
predicted | 2325430 | Mir127 | rno-miR-127-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 14 | 20 | 8mer | 0.402084 | 0.804 | -15.60 | |||
predicted | 2325432 | Mir34b | rno-miR-34b-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 119 | 125 | Offset 1-7 7mer-m8 | 0.428099 | 0.856 | -15.30 | |||
predicted | 2325441 | Mir672 | rno-miR-672-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 6 | 13 | 7mer-m8 | 0.475695 | 0.951 | -15.10 | |||
predicted | 2325445 | Snora36c | rno-miR-664-1-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 5 | 12 | 7mer-m8 | 0.133593 | 0.267 | -17.10 | |||
predicted | 2325451 | Mir221 | rno-miR-221-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 55 | 63 | Offset 1-7 7mer-m8 | 0.438602 | 0.877 | -15.30 | |||
predicted | 2325461 | Mir28 | rno-miR-28-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 76 | 83 | 8mer | 0.467635 | 0.935 | -15.20 | |||
predicted | 2325468 | Mir711 | rno-miR-711 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 13 | 20 | Offset 1-7 8mer | 0.022173 | 0.044 | -19.20 | |||
predicted | 2325489 | Mir760 | rno-miR-760-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 10 | 17 | 7mer-m8 | 0.431763 | 0.864 | -15.50 | |||
predicted | 2325489 | Mir760 | rno-miR-760-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 69 | 75 | Offset 1-7 7mer-m8 | 0.382332 | 0.765 | -15.60 | |||
predicted | 2325511 | Mir874 | rno-miR-874-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 65 | 71 | Offset 3-9 8mer | 0.380909 | 0.762 | ||||
predicted | 2325511 | Mir874 | rno-miR-874-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 44 | 67 | 7mer-m8 | 156.000000 | 0.262 | ||||
predicted | 2325513 | Mir664-2 | rno-miR-664-2-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 5 | 12 | 7mer-m8 | 0.133593 | 0.267 | ||||
predicted | 2325519 | Mir485 | rno-miR-485-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 6 | 13 | 7mer-m8 | 0.087970 | 0.176 | -17.50 | |||
predicted | 2325526 | Mir543 | rno-miR-543-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 26 | 44 | 7mer-m8 | 146.000000 | 0.098 | -12.09 | |||
predicted | 2325532 | Mir361 | rno-miR-361-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 1 | 18 | 7mer-m8 | 0.006501 | 0.013 | ||||
predicted | 2325536 | Mir449a | rno-miR-449a-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 119 | 125 | Offset 1-7 7mer-m8 | 0.428099 | 0.856 | -15.30 | |||
predicted | 2325548 | Mir214 | rno-miR-214-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 71 | 94 | 7mer-m8 | 0.233730 | 0.467 | ||||
predicted | 2325554 | Mir194-2 | rno-miR-194-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 85 | 93 | Offset 1-7 7mer-m8 | 0.373677 | 0.747 | -15.70 | |||
predicted | 2325558 | Mir186 | rno-miR-186-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 86 | 106 | 7mer-m8 | 152.000000 | 0.197 | ||||
predicted | 2325561 | Mir181b1 | rno-miR-181b-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 21 | 43 | 7mer-m8 | 147.000000 | 0.115 | -15.31 | |||
predicted | 2325565 | Mir145 | rno-miR-145-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 19 | 27 | Offset 1-7 7mer-m8 | 0.366675 | 0.733 | -15.30 | |||
predicted | 2325574 | Mir128-1 | rno-miR-128-1-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 62 | 67 | 7mer-1A | 0.214627 | 0.429 | -16.70 | |||
predicted | 2325578 | Mir107 | rno-miR-107-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 88 | 94 | Offset 1-7 7mer-m8 | 0.437212 | 0.874 | -15.00 | |||
predicted | 2325579 | Mir103a1 | rno-miR-103-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 88 | 94 | Offset 1-7 7mer-m8 | 0.437212 | 0.874 | -15.00 | |||
predicted | 2325584 | Mir34a | rno-miR-34a-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 119 | 125 | Offset 1-7 7mer-m8 | 0.428099 | 0.856 | -15.30 | |||
predicted | 2325585 | Mir34c | rno-miR-34c-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 119 | 125 | Offset 1-7 7mer-m8 | 0.428099 | 0.856 | -15.30 | |||
predicted | 2325592 | Mir27a | rno-miR-27a-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 93 | 116 | N/A | 141.000000 | 0.016 | -20.86 | |||
predicted | 2325592 | Mir27a | rno-miR-27a-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 61 | 67 | Offset 1-7 8mer | 0.377778 | 0.756 | -15.40 | |||
predicted | 2325593 | Mir27b | rno-miR-27b-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 93 | 116 | N/A | 141.000000 | 0.016 | ||||
predicted | 2325596 | Mir23b | rno-miR-23b-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 68 | 75 | Offset 1-7 7mer-m8 | 0.184345 | 0.369 | -16.40 | |||
predicted | 2325604 | Mirlet7i | rno-let-7i-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 110 | 130 | Offset 3-8 6mer | 149.000000 | 0.148 | -18.61 | |||
predicted | 2325605 | Mirlet7f2 | rno-let-7f-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 110 | 130 | Offset 3-8 6mer | 142.000000 | 0.033 | -14.06 | |||
predicted | 2325606 | Mirlet7e | rno-let-7e-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 110 | 130 | Offset 3-8 6mer | 146.000000 | 0.098 | -18.08 | |||
predicted | 2325610 | Mir135b | rno-miR-135b-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 84 | 91 | 7mer-m8 | 0.118076 | 0.236 | -17.00 | |||
predicted | 2325614 | Mir344-1 | rno-miR-344a-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 49 | 78 | 8mer | 154.000000 | 0.230 | ||||
predicted | 2325616 | Mir338 | rno-miR-338-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 43 | 63 | 7mer-m8 | 145.000000 | 0.082 | ||||
predicted | 2325619 | Mir331 | rno-miR-331-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 52 | 73 | Offset 3-8 6mer | 146.000000 | 0.098 | -26.46 | |||
predicted | 2325620 | Mir330 | rno-miR-330-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 52 | 72 | N/A | 0.026836 | 0.054 | ||||
predicted | 2325622 | Mirlet7d | rno-let-7d-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 108 | 130 | Offset 3-8 6mer | 142.000000 | 0.033 | -20.34 | |||
predicted | 2325623 | Mir326 | rno-miR-326-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 120 | 126 | 8mer | 0.357117 | 0.714 | -15.90 | |||
predicted | 2325623 | Mir326 | rno-miR-326-3p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 52 | 72 | N/A | 140.000000 | 0.000 | ||||
predicted | 4888547 | Mir449c | rno-miR-449c-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 119 | 125 | Offset 1-7 7mer-m8 | 0.435971 | 0.872 | -15.30 | |||
predicted | 4888550 | Mir344b-1 | rno-miR-344b-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 71 | 78 | 7mer-m8 | 0.140447 | 0.281 | -16.80 | |||
predicted | 4888551 | Mir328b | rno-miR-328b-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 60 | 66 | 7mer-m8 | 0.212145 | 0.424 | -16.50 | |||
predicted | 4888565 | Mir344a-2 | rno-miR-344a | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 59 | 78 | 8mer | 151.000000 | 0.180 | ||||
predicted | 4888570 | Mir3594 | rno-miR-3594-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 84 | 90 | 7mer-m8 | 0.169504 | 0.339 | -16.80 | |||
predicted | 4888588 | Mir1188 | rno-miR-1188-3p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 69 | 76 | 7mer-m8 | 0.073726 | 0.147 | -17.70 | |||
predicted | 7488974 | Mir16 | rno-miR-16-5p | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 75 | 96 | 7mer-m8 | 142.000000 | 0.033 | ||||
predicted | 7488977 | Mir15b | rno-miR-15b-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 76 | 96 | 7mer-m8 | 0.167231 | 0.334 | ||||
predicted | 7489017 | Mir344g | rno-miR-344g | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 58 | 80 | Offset 3-8 6mer | 0.140447 | 0.281 | ||||
predicted | 7489020 | Mir6315 | rno-miR-6315 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 16 | 22 | Offset 1-7 7mer-m8 | 0.486648 | 0.973 | -15.10 | |||
predicted | 7489021 | Mir6334 | rno-miR-6334 | Miranda | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 57 | 78 | 8mer | 152.000000 | 0.197 | ||||
predicted | 7489024 | Mir3473 | rno-miR-3473 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 83 | 90 | 7mer-m8 | 0.252226 | 0.504 | -16.10 | |||
predicted | 7489027 | Mir6332 | rno-miR-6332 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 85 | 91 | Offset 1-7 7mer-m8 | 0.164554 | 0.329 | ||||
predicted | 7489032 | Mir6323 | rno-miR-6323 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 58 | 84 | 8mer | 0.291048 | 0.582 | ||||
predicted | 7489034 | Mir128-2 | rno-miR-128-2-5p | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 62 | 67 | 7mer-1A | 0.214627 | 0.429 | -16.70 | |||
predicted | 7489045 | Mir6333 | rno-miR-6333 | Rnahybrid | miRGate_prediction | ENSRNOT00000025141 | protein_coding | PRINCIPAL | Yes | 1 | 14 | 7mer-m8 | 0.014677 | 0.029 |