ICAM1 (intercellular adhesion molecule 1) - Rat Genome Database

Send us a Message



Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Grant Resources Citing RGD About Us Contact Us
Search by Genomic Position Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quantitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: ICAM1 (intercellular adhesion molecule 1) Canis lupus familiaris
Analyze
Symbol: ICAM1
Name: intercellular adhesion molecule 1
RGD ID: 12268978
Description: ENCODES a protein that exhibits integrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); canonical NF-kappaB signal transduction (ortholog); cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ICAM-1; intercellular adhesion molecule 1 (CD54), human rhinovirus receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,818,715 - 50,827,914 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,818,715 - 50,827,914 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2050,688,470 - 50,697,454 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02051,340,345 - 51,349,327 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2051,340,352 - 51,349,346 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12050,546,484 - 50,555,463 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02050,975,237 - 50,984,210 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02051,216,377 - 51,225,401 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Disease Annotations     Click to see Annotation Detail View
Acute Experimental Pancreatitis  (ISO)
acute kidney failure  (ISO)
Acute Lung Injury  (ISO)
acute necrotizing pancreatitis  (ISO)
adult respiratory distress syndrome  (ISO)
alcoholic hepatitis  (ISO)
allergic bronchopulmonary aspergillosis  (ISO)
allergic conjunctivitis  (ISO)
allergic disease  (ISO)
Alzheimer's disease  (ISO)
Animal Hepatitis  (ISO)
aortic atherosclerosis  (ISO)
arteriosclerosis  (ISO)
asthma  (ISO)
atherosclerosis  (ISO)
B-Cell Chronic Lymphocytic Leukemia  (ISO)
Bacteremia  (ISO)
bacterial pneumonia  (ISO)
Behcet's disease  (ISO)
biliary atresia  (ISO)
Brain Death  (ISO)
brain edema  (ISO)
brain infarction  (ISO)
Brain Injuries  (ISO)
brain ischemia  (ISO)
breast cancer  (ISO)
Breast Cancer, Familial  (ISO)
Bronchial Hyperreactivity  (ISO)
bronchiectasis  (ISO)
bronchus carcinoma  (ISO)
bullous pemphigoid  (ISO)
cardiovascular system disease  (ISO)
Carotid Artery Injuries  (ISO)
cerebral infarction  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
chlamydia  (ISO)
cholestasis  (ISO)
cholesteatoma of middle ear  (ISO)
Choroidal Neovascularization  (ISO)
Chronic Bronchitis  (ISO)
Chronic Intermittent Hypoxia  (ISO)
chronic obstructive pulmonary disease  (ISO)
chronic ulcer of skin  (ISO)
colitis  (ISO)
Colonic Neoplasms  (ISO)
contact dermatitis  (ISO)
Crohn's disease  (ISO)
Delayed Hypersensitivity  (ISO)
dermatitis  (ISO)
diabetes mellitus  (ISO)
diabetic angiopathy  (ISO)
Diabetic Nephropathies  (ISO)
diabetic retinopathy  (ISO)
Diaphragmatic Hernia  (ISO)
diffuse large B-cell lymphoma  (ISO)
end stage renal disease  (ISO)
Endotoxemia  (ISO)
Enteritis  (ISO)
Eosinophilic Myocarditis  (ISO)
Experimental Autoimmune Myocarditis  (ISO)
Experimental Autoimmune Uveitis  (ISO)
Experimental Autoimmune Uveoretinitis  (ISO)
Experimental Colitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Fibrosis  (ISO)
gestational diabetes  (ISO)
graft-versus-host disease  (ISO)
Graves ophthalmopathy  (ISO)
Graves' disease  (ISO)
Hashimoto Disease  (ISO)
Hearing Loss, Noise-Induced  (ISO)
Hemorrhagic Shock  (ISO)
hepatocellular carcinoma  (ISO)
Hodgkin's lymphoma  (ISO)
Hypercholesterolemia  (ISO)
hyperglycemia  (ISO)
hyperhomocysteinemia  (ISO)
Hyperoxia  (ISO)
hypertension  (ISO)
hypertrophic cardiomyopathy  (ISO)
idiopathic interstitial pneumonia  (ISO)
Inflammation  (ISO)
inflammatory bowel disease  (ISO)
Insulin Resistance  (ISO)
Intestinal Reperfusion Injury  (ISO)
Intimal Hyperplasia  (ISO)
iridocyclitis  (ISO)
Jaundice  (ISO)
Kidney Neoplasms  (ISO)
leukostasis  (ISO)
liver cirrhosis  (ISO)
Liver Injury  (ISO)
Liver Reperfusion Injury  (ISO)
localized scleroderma  (ISO)
Lung Injury  (ISO)
lung non-small cell carcinoma  (ISO)
Lung Reperfusion Injury  (ISO)
Lymphatic Metastasis  (ISO)
Lymphocytic Myocarditis  (ISO)
malaria  (ISO)
melanoma  (ISO)
Mercury Poisoning  (ISO)
mesenteric vascular occlusion  (ISO)
metabolic dysfunction-associated steatohepatitis  (ISO)
Metabolic Syndrome  (ISO)
middle cerebral artery infarction  (ISO)
Mouth Neoplasms  (ISO)
multiple myeloma  (ISO)
Multiple Organ Failure  (ISO)
multiple sclerosis  (ISO)
myocardial infarction  (ISO)
Myocardial Ischemia  (ISO)
Myocardial Reperfusion Injury  (ISO)
myocarditis  (ISO)
Nasal Polyps  (ISO)
Neoplasm Metastasis  (ISO)
neovascular inflammatory vitreoretinopathy  (ISO)
nephritis  (ISO)
nephrosis  (ISO)
newborn respiratory distress syndrome  (ISO)
non-Hodgkin lymphoma  (ISO)
nonpapillary renal cell carcinoma  (ISO)
obesity  (ISO)
obstructive sleep apnea  (ISO)
otitis media  (ISO)
ovarian cancer  (ISO)
ovarian serous cystadenocarcinoma  (ISO)
pancreatic cancer  (ISO)
pancreatitis  (ISO)
paracoccidioidomycosis  (ISO)
Penetrating Wounds  (ISO)
Perennial Allergic Rhinitis  (ISO)
peripheral nervous system disease  (ISO)
pleurisy  (ISO)
pneumonia  (ISO)
pre-eclampsia  (ISO)
primary biliary cholangitis  (ISO)
Primary Graft Dysfunction  (ISO)
Prinzmetal angina  (ISO)
prostate cancer  (ISO)
Prostatic Neoplasms  (ISO)
proteinuria  (ISO)
Pseudomonas Aeruginosa Keratitis  (ISO)
psoriasis  (ISO)
pulmonary fibrosis  (ISO)
pulmonary hypertension  (ISO)
Reperfusion Injury  (ISO)
respiratory syncytial virus infectious disease  (ISO)
Retina Reperfusion Injury  (ISO)
retinal disease  (ISO)
retinopathy of prematurity  (ISO)
rheumatic fever  (ISO)
rheumatic myocarditis  (ISO)
sciatic neuropathy  (ISO)
Seasonal Allergic Rhinitis  (ISO)
Sepsis  (ISO)
Sjogren's syndrome  (ISO)
skin melanoma  (ISO)
Spinal Cord Injuries  (ISO)
stroke  (ISO)
Subarachnoid Hemorrhage  (ISO)
systemic scleroderma  (ISO)
thymoma  (ISO)
transient cerebral ischemia  (ISO)
traumatic brain injury  (ISO)
type 1 diabetes mellitus  (ISO)
type 2 diabetes mellitus  (ISO)
ulcerative colitis  (ISO)
uremia  (ISO)
ureteral obstruction  (ISO)
urinary bladder cancer  (ISO)
urticaria  (ISO)
uterine corpus endometrial carcinoma  (ISO)
uveitis  (ISO)
venous insufficiency  (ISO)
Viral Myocarditis  (ISO)
Wounds and Injuries  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
acute inflammatory response to antigenic stimulus  (ISO)
canonical NF-kappaB signal transduction  (ISO)
cell adhesion  (IEA,ISO)
cell adhesion mediated by integrin  (ISO)
cell-cell adhesion  (IEA,ISO)
cell-cell adhesion mediated by integrin  (IBA)
cellular response to alkaloid  (ISO)
cellular response to amyloid-beta  (ISO)
cellular response to dexamethasone stimulus  (ISO)
cellular response to glucose stimulus  (ISO)
cellular response to hypoxia  (ISO)
cellular response to interleukin-1  (ISO)
cellular response to interleukin-6  (ISO)
cellular response to leukemia inhibitory factor  (ISO)
cellular response to lipopolysaccharide  (ISO)
cellular response to nutrient levels  (ISO)
cellular response to oxygen-containing compound  (IEA)
cellular response to tumor necrosis factor  (ISO)
cellular response to type II interferon  (ISO)
cellular senescence  (ISO)
establishment of endothelial barrier  (ISO)
establishment of endothelial intestinal barrier  (ISO)
establishment of Sertoli cell barrier  (ISO)
immune effector process  (IEA)
immune response  (IEA)
leukocyte adhesion to vascular endothelial cell  (ISO)
leukocyte cell-cell adhesion  (IBA,IEA,ISO)
leukocyte migration  (IEA)
membrane to membrane docking  (ISO)
negative regulation of calcium ion transport  (ISO)
negative regulation of endothelial cell apoptotic process  (ISO)
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors  (ISO)
ovarian follicle development  (ISO)
positive regulation of actin filament polymerization  (ISO)
positive regulation of cellular extravasation  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of GTPase activity  (ISO)
positive regulation of leukocyte adhesion to vascular endothelial cell  (ISO)
positive regulation of nitric oxide biosynthetic process  (ISO)
positive regulation of peptidyl-tyrosine phosphorylation  (ISO)
positive regulation of T cell apoptotic process  (ISO)
positive regulation of vasoconstriction  (ISO)
regulation of activated T cell proliferation  (ISO)
regulation of cell shape  (ISO)
regulation of ruffle assembly  (ISO)
response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine  (ISO)
response to amino acid  (ISO)
response to amphetamine  (ISO)
response to copper ion  (ISO)
response to ethanol  (ISO)
response to gonadotropin  (ISO)
response to hypoxia  (ISO)
response to insulin  (ISO)
response to ionizing radiation  (ISO)
response to lipopolysaccharide  (ISO)
response to sulfur dioxide  (ISO)
response to xenobiotic stimulus  (ISO)
signal transduction  (IEA)
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell  (ISO)
T cell antigen processing and presentation  (ISO)
T cell extravasation  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:1680878   PMID:7758971   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ICAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,818,715 - 50,827,914 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,818,715 - 50,827,914 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2050,688,470 - 50,697,454 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02051,340,345 - 51,349,327 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2051,340,352 - 51,349,346 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12050,546,484 - 50,555,463 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02050,975,237 - 50,984,210 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02051,216,377 - 51,225,401 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
ICAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381910,271,120 - 10,286,615 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1910,271,093 - 10,286,617 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371910,381,796 - 10,397,291 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,242,779 - 10,258,291 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341910,242,778 - 10,258,291NCBI
Celera1910,276,917 - 10,292,687 (+)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef199,965,426 - 9,977,270 (+)NCBIHuRef
CHM1_11910,381,783 - 10,397,556 (+)NCBICHM1_1
T2T-CHM13v2.01910,397,229 - 10,412,727 (+)NCBIT2T-CHM13v2.0
Icam1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39920,927,236 - 20,940,110 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl920,926,672 - 20,940,113 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38921,015,940 - 21,028,814 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl921,015,985 - 21,028,817 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37920,820,404 - 20,833,241 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36920,766,362 - 20,779,199 (+)NCBIMGSCv36mm8
Celera918,284,644 - 18,297,383 (+)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.69NCBI
Icam1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8827,829,688 - 27,841,618 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl827,829,161 - 27,841,617 (+)EnsemblGRCr8
mRatBN7.2819,553,063 - 19,565,438 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl819,553,645 - 19,565,438 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx823,573,091 - 23,584,847 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0821,870,936 - 21,882,706 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0819,783,338 - 19,795,094 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd827,835,688 - 27,847,440 (+)NCBI
Lyon_Normotensive830,011,403 - 30,023,155 (+)NCBI
Lyon_Hypertensive828,586,817 - 28,598,569 (+)NCBI
F344_StmMcwi819,929,681 - 19,941,431 (+)NCBI
Rnor_6.0822,035,287 - 22,047,049 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl822,035,256 - 22,047,059 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0822,092,155 - 22,103,917 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4820,040,177 - 20,051,939 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera820,948,090 - 20,959,852 (+)NCBICelera
RGSC_v3.1820,040,176 - 20,051,939 (+)NCBI
RH 3.4 Map8206.11RGD
Cytogenetic Map8q13NCBI
Icam1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554951,561,714 - 1,574,755 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554951,561,464 - 1,573,282 (+)NCBIChiLan1.0ChiLan1.0
ICAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22015,184,919 - 15,203,585 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11914,183,529 - 14,202,201 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0199,821,402 - 9,837,021 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11910,484,414 - 10,500,605 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1910,484,414 - 10,500,605 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
Icam1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap128,254,405 - 8,265,421 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_024405118209,727,534 - 209,738,599 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936659616,752 - 627,174 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936659616,570 - 627,172 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ICAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl269,097,122 - 69,108,205 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1269,097,136 - 69,107,722 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2269,431,462 - 69,442,072 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ICAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1652,394,956 - 52,410,697 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366607410,702,922 - 10,719,213 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.169,320,991 - 9,338,125 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl69,322,550 - 9,338,263 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Icam1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248282,432,584 - 2,451,997 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046248282,432,550 - 2,453,071 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl2913,230,358 - 13,241,500 (-)Ensembl
Icam1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1817,279,224 - 17,290,965 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in ICAM1
119 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000028361   ⟹   ENSCAFP00000026375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2050,818,715 - 50,827,914 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845049416   ⟹   ENSCAFP00845038773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2051,340,352 - 51,349,346 (-)Ensembl
RefSeq Acc Id: NM_001003291   ⟹   NP_001003291
RefSeq Status: VALIDATED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12050,818,715 - 50,827,914 (-)NCBI
Dog10K_Boxer_Tasha2050,688,470 - 50,697,454 (-)NCBI
ROS_Cfam_1.02051,340,345 - 51,349,327 (-)NCBI
UMICH_Zoey_3.12050,546,484 - 50,555,463 (-)NCBI
UNSW_CanFamBas_1.02050,975,237 - 50,984,210 (-)NCBI
UU_Cfam_GSD_1.02051,216,377 - 51,225,401 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001003291 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA92551 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000026375
  ENSCAFP00845038773
GenBank Protein P33729 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001003291   ⟸   NM_001003291
- Peptide Label: precursor
- UniProtKB: Q28291 (UniProtKB/Swiss-Prot),   P33729 (UniProtKB/Swiss-Prot),   A0A8I3Q3A8 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSCAFP00000026375   ⟸   ENSCAFT00000028361
Ensembl Acc Id: ENSCAFP00845038773   ⟸   ENSCAFT00845049416
Protein Domains
Ig-like C2-type

Promoters
RGD ID:13687040
Promoter ID:EPDNEW_C5109
Type:single initiation site
Name:ICAM1_1
Description:intercellular adhesion molecule 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12050,827,933 - 50,827,993EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000031460 Ensembl, UniProtKB/Swiss-Prot
  ENSCAFG00845027986 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00000028361 UniProtKB/Swiss-Prot
  ENSCAFT00845049416 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
InterPro ICAM UniProtKB/Swiss-Prot
  ICAM1_3_5_D2 UniProtKB/Swiss-Prot
  ICAM_N UniProtKB/Swiss-Prot
  ICAM_VCAM UniProtKB/Swiss-Prot
  ICAM_VCAM_N UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
NCBI Gene ICAM1 ENTREZGENE
PANTHER INTERCELLULAR ADHESION MOLECULE UniProtKB/Swiss-Prot
  INTERCELLULAR ADHESION MOLECULE 1 UniProtKB/Swiss-Prot
Pfam ICAM1_3_5_D2 UniProtKB/Swiss-Prot
  ICAM_N UniProtKB/Swiss-Prot
PRINTS ICAM UniProtKB/Swiss-Prot
  ICAMVCAM1 UniProtKB/Swiss-Prot
SMART SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A0A8I3Q3A8 ENTREZGENE
  ICAM1_CANLF UniProtKB/Swiss-Prot, ENTREZGENE
  Q28291 ENTREZGENE
UniProt Secondary A0A8I3Q3A8 UniProtKB/Swiss-Prot
  Q28291 UniProtKB/Swiss-Prot
VGNC ID VGNC:41856 ENTREZGENE