Itgb2 (integrin subunit beta 2) - Rat Genome Database

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Gene: Itgb2 (integrin subunit beta 2) Rattus norvegicus
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Symbol: Itgb2
Name: integrin subunit beta 2
RGD ID: 1305581
Description: Contributes to cell adhesion molecule binding activity. Involved in several processes, including leukocyte migration involved in inflammatory response; positive regulation of NF-kappaB transcription factor activity; and positive regulation of nitric oxide biosynthetic process. Located in cell surface. Used to study nephritis and pneumonia. Biomarker of allergic rhinitis. Human ortholog(s) of this gene implicated in coronary restenosis; leukocyte adhesion deficiency; and leukocyte adhesion deficiency 1. Orthologous to human ITGB2 (integrin subunit beta 2); PARTICIPATES IN hypoxia inducible factor pathway; integrin mediated signaling pathway; Entamoebiasis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 17beta-estradiol 3-benzoate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Cd18; CD18 leukocyte adhesion molecule; integrin beta 2; integrin beta-2; integrin, beta 2; integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1; integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1); integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1, macrophage antigen 1 (mac-1) beta subunit); macrophage antigen 1 (mac-1) beta subunit; macrophage antigen 1 (mac-1) beta subunit); MGC116306
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82011,061,009 - 11,097,242 (-)NCBIGRCr8
mRatBN7.22011,061,394 - 11,097,656 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2011,061,430 - 11,097,600 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2011,760,914 - 11,797,085 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02011,121,883 - 11,158,052 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02011,593,622 - 11,629,796 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02011,777,773 - 11,815,647 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2011,777,783 - 11,815,647 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02013,944,190 - 13,981,048 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42011,446,521 - 11,485,009 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12011,446,936 - 11,485,236 (-)NCBI
Celera2012,564,941 - 12,601,097 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Itgb2RatAcute Lung Injury  IMP 6482199 RGD 
Itgb2Ratallergic rhinitis treatmentIEP 9698435 RGD 
Itgb2RatCerebral Hemorrhage  ISORGD:13136956482197 RGD 
Itgb2RatChronic Periodontitis  ISORGD:13136946480655mRNA:increased expression:gingival tissues (human)RGD 
Itgb2Ratcolitis  ISORGD:13136956482227associated with Spirochaetales infectionsRGD 
Itgb2Ratcoronary restenosis  ISORGD:13136941581185 RGD 
Itgb2RatDiabetic Nephropathies  ISORGD:1313694401851916mRNA:increased expression:nephron tubule (human)RGD 
Itgb2RatEnterocolitis  ISORGD:13136946482226associated with Hirschsprung Disease;DNA:polymorphisms:multipleRGD 
Itgb2RatEosinophilic Myocarditis treatmentISORGD:131369513702914 RGD 
Itgb2RatEpstein-Barr virus infectious disease  ISORGD:1313694127285814associated with Hodgkin's lymphoma;mRNA, protein:increased expression:lymph node (human)RGD 
Itgb2RatExperimental Arthritis  IMP 6482229 RGD 
Itgb2Ratglomerulonephritis  ISORGD:13136956907066 RGD 
Itgb2Ratglomerulonephritis  ISORGD:13136956907051 RGD 
Itgb2RatKidney Neoplasms  ISORGD:13136956907072 RGD 
Itgb2RatKidney Reperfusion Injury  IMP 6907073 RGD 
Itgb2RatKidney Reperfusion Injury  ISORGD:13136946907049Associated with renal transplant patientsRGD 
Itgb2Ratleishmaniasis amelioratesISORGD:1313695127285813 RGD 
Itgb2Ratleukocyte adhesion deficiency  ISORGD:13136946482224DNA:mutations:multipleRGD 
Itgb2Ratleukocyte adhesion deficiency  ISORGD:13136941600220 RGD 
Itgb2Ratleukocyte adhesion deficiency  ISORGD:13136946482225DNA:deletion, nonsense mutations:exons:1622_1657del, 2200G>T (human)RGD 
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Itgb2Ratautistic disorder  ISORGD:13136948554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106|PMID:30208311
Itgb2Ratautoimmune polyendocrine syndrome type 1  ISORGD:13136948554872ClinVar Annotator: match by term: Polyglandular autoimmune syndrome, type 1ClinVarPMID:28492532
Itgb2Ratcataract 9 multiple types  ISORGD:13136948554872ClinVar Annotator: match by term: Cataract 9 multiple typesClinVarPMID:28492532
Itgb2Ratdevelopmental and epileptic encephalopathy 30  ISORGD:13136948554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy, 30ClinVarPMID:28492532|PMID:8596935
Itgb2Ratgenetic disease  ISORGD:13136948554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:10886250|PMID:11703376|PMID:12488604|PMID:1346132|PMID:17875809|PMID:22134107|PMID:25514840|PMID:25703682|PMID:25741868|PMID:28492532|PMID:30412664|PMID:7143170|PMID:7686755|PMID:7705401
Itgb2Rathomocystinuria  ISORGD:13136948554872ClinVar Annotator: match by term: HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATEDClinVarPMID:10338090|PMID:12124992|PMID:28492532
Itgb2Ratleukocyte adhesion deficiency  ISORGD:13136948554872ClinVar Annotator: match by term: Leukocyte adhesion deficiencyClinVar 
Itgb2Ratleukocyte adhesion deficiency 1  ISORGD:13136948554872ClinVar Annotator: match by term: Leukocyte adhesion deficiency 1ClinVarPMID:10712675|PMID:10886250|PMID:11703376|PMID:11882363|PMID:12377933|PMID:12488604|PMID:1346132|PMID:1346613|PMID:1347532|PMID:14512306|PMID:1590804|PMID:16199547|PMID:16595236|PMID:1694220|PMID:17576681|PMID:17875809|PMID:18675632|PMID:19171538|PMID:1968911|PMID:20549317|PMID:20807363|PMID:21103413|PMID:21195692|PMID:22134107|PMID:24033266|PMID:24338230|PMID:24753537|PMID:25135596|PMID:25514840|PMID:25703682|PMID:25741868|PMID:25858935|PMID:26497373|PMID:26639818|PMID:27492259|PMID:28445705|PMID:28492532|PMID:29548898|PMID:30041527|PMID:30412664|PMID:30919141|PMID:32279896|PMID:33391282|PMID:36353617|PMID:6142255|PMID:7143170|PMID:7686755|PMID:7705401|PMID:7901025|PMID:9536098|PMID:9884339
Itgb2Ratleukocyte adhesion deficiency 3  ISORGD:13136948554872ClinVar Annotator: match by term: Leukocyte adhesion deficiency 3ClinVarPMID:25741868
Itgb2RatNeurodevelopmental Disorders  ISORGD:13136948554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Itgb2Ratprimary ciliary dyskinesia  ISORGD:13136948554872ClinVar Annotator: match by term: Primary ciliary dyskinesiaClinVarPMID:28492532
Itgb2Ratprogressive myoclonus epilepsy  ISORGD:13136948554872ClinVar Annotator: match by term: Progressive myoclonic epilepsyClinVarPMID:28492532|PMID:8596935
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Itgb2Ratacute promyelocytic leukemia  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:16764927
Itgb2Ratallergic disease  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:21625544
Itgb2RatBehcet's disease  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:8712863
Itgb2RatBrain Neoplasms  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:27935819
Itgb2Ratcalcinosis  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:21335463
Itgb2RatChloracne  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:17101203
Itgb2Ratchronic ulcer of skin  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:9653089
Itgb2Ratdermatitis  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:9653089
Itgb2RatExperimental Liver Cirrhosis  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136
Itgb2Ratheart valve disease  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:21335463
Itgb2Ratleukocyte adhesion deficiency  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:9653089
Itgb2Ratleukocyte adhesion deficiency 1  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTD 
Itgb2Ratleukocyte disease  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:2880869|PMID:9653089
Itgb2Ratnephrosis  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:12845231
Itgb2Ratpneumonia  ISORGD:131369411554173CTD Direct Evidence: marker/mechanismCTDPMID:21625544
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Itgb2Ratleukocyte adhesion deficiency 1  ISSRGD:131369513592920OMIM:116920MouseDO 
Itgb2Ratpsoriasis  ISSRGD:131369513592920OMIM:177900 | OMIM:601454 | OMIM:602723 | OMIM:603935 | OMIM:604316 | OMIM:605364 | OMIM:605606 | OMIM:607857 more ...MouseDO 
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Itgb2Ratleukocyte adhesion deficiency 1  ISORGD:13136947240710 OMIM 

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Itgb2Rat(+)-catechin multiple interactionsISORGD:13136946480464Catechin inhibits the reaction [S100B protein results in increased expression of ITGB2 mRNA]CTDPMID:17103373
Itgb2Rat(-)-Arctigenin decreases secretionISORGD:13136946480464arctigenin results in decreased secretion of ITGB2 proteinCTDPMID:29740324
Itgb2Rat(1->4)-beta-D-glucan multiple interactionsISORGD:13136956480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ITGB2 mRNACTDPMID:36331819
Itgb2Rat(20S)-ginsenoside Rh1 multiple interactionsISORGD:13136946480464ginsenoside Rh1 inhibits the reaction [TNF protein results in increased expression of [ITGAL protein binds more ...CTDPMID:21875580
Itgb2Rat(S)-ropivacaine multiple interactionsISORGD:13136946480464Ropivacaine inhibits the reaction [TNF protein results in increased expression of [ITGAM protein binds to more ...CTDPMID:9336308
Itgb2Rat1,1-dichloroethene increases expressionISORGD:13136956480464vinylidene chloride results in increased expression of ITGB2 mRNACTDPMID:26682919
Itgb2Rat1,2-dimethylhydrazine increases expressionISORGD:131369564804641,2-Dimethylhydrazine results in increased expression of ITGB2 mRNACTDPMID:22206623
Itgb2Rat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of ITGB2 mRNACTDPMID:25380136
Itgb2Rat1-naphthyl isothiocyanate multiple interactionsISORGD:13136946480464[1-Naphthylisothiocyanate co-treated with Cholic Acids] affects the expression of ITGB2 mRNACTDPMID:27344345
Itgb2Rat1-naphthyl isothiocyanate increases response to substanceISORGD:13136956480464ITGB2 protein results in increased susceptibility to 1-NaphthylisothiocyanateCTDPMID:16614373|PMID:21070799
Itgb2Rat17alpha-ethynylestradiol multiple interactionsISORGD:13136946480464[Ethinyl Estradiol co-treated with Cholic Acids] affects the expression of ITGB2 mRNACTDPMID:27344345
Itgb2Rat17beta-estradiol multiple interactionsISORGD:13136946480464[Estradiol co-treated with TGFB1 protein] results in decreased expression of ITGB2 mRNA; [Progesterone co-treated with more ...CTDPMID:20226447|PMID:30165855
Itgb2Rat17beta-estradiol decreases expressionISORGD:13136956480464Estradiol results in decreased expression of ITGB2 mRNACTDPMID:39298647
Itgb2Rat17beta-estradiol multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of ITGB2 mRNACTDPMID:32741896
Itgb2Rat17beta-estradiol 3-benzoate multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of ITGB2 mRNACTDPMID:32741896
Itgb2Rat2,2',4,4'-Tetrabromodiphenyl ether increases expressionEXP 64804642,2',4,4'-tetrabromodiphenyl ether results in increased expression of ITGB2 mRNACTDPMID:27291303
Itgb2Rat2,2',4,4'-Tetrabromodiphenyl ether multiple interactionsISORGD:13136956480464[Flame Retardants results in increased abundance of 2,2',4,4'-tetrabromodiphenyl ether] which results in increased expression of more ...CTDPMID:38995820
Itgb2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13136956480464Tetrachlorodibenzodioxin affects the expression of ITGB2 mRNACTDPMID:16962184
Itgb2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ITGB2 mRNACTDPMID:34747641
Itgb2Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISORGD:131369564804642,2',4,4',5-brominated diphenyl ether affects the expression of ITGB2 mRNACTDPMID:38648751

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Biological Process
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Itgb2Ratactivated T cell proliferation acts_upstream_of_or_withinISORGD:13136951624291MGI:1861705 PMID:15210787RGDPMID:15210787
Itgb2Ratamyloid-beta clearance involved_inISORGD:13136951624291 PMID:20199584RGDPMID:20199584
Itgb2Ratcell adhesion involved_inISORGD:13136941624291 PMID:19703720RGDPMID:19703720
Itgb2Ratcell adhesion acts_upstream_of_or_withinISORGD:13136951624291MGI:1861705|MGI:1933825|MGI:96607 PMID:10528208, PMID:19342649RGDPMID:10528208|PMID:19342649
Itgb2Ratcell adhesion involved_inIEAUniProtKB-KW:KW-01301600115GO_REF:0000043UniProtGO_REF:0000043
Itgb2Ratcell adhesion involved_inIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratcell adhesion mediated by integrin involved_inIBAFB:FBgn0004657|MGI:96615|PANTHER:PTN000801545|RGD:2927|UniProtKB:P05106|UniProtKB:P05556|UniProtKB:P18564|ZFIN:ZDB-GENE-030909-101600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratcell-cell adhesion  IMP 1582375 RGD 
Itgb2Ratcell-cell adhesion acts_upstream_of_or_withinISORGD:13136951624291MGI:1933820|MGI:1933825|MGI:96607 PMID:16093349RGDPMID:16093349
Itgb2Ratcell-cell adhesion involved_inISORGD:13136951624291UniProtKB:P24063 PMID:12652296RGDPMID:12652296
Itgb2Ratcell-cell adhesion  IMP 1625386 RGD 
Itgb2Ratcell-matrix adhesion involved_inISORGD:13136941624291 PMID:18083624, PMID:19029120RGDPMID:18083624|PMID:19029120
Itgb2Ratcell-matrix adhesion involved_inIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratcell-matrix adhesion involved_inIBAMGI:96610|MGI:96612|MGI:96615|PANTHER:PTN000801545|UniProtKB:P05106|UniProtKB:P05107|UniProtKB:P05556|UniProtKB:P16144|UniProtKB:P18084|UniProtKB:P26010|ZFIN:ZDB-GENE-030909-101600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratcellular extravasation  IMP 1600231 RGD 
Itgb2Ratcellular extravasation acts_upstream_of_or_withinISORGD:13136951624291MGI:1861705 PMID:10528208RGDPMID:10528208
Itgb2Ratcellular response to low-density lipoprotein particle stimulus involved_inISORGD:13136951624291 PMID:23395392RGDPMID:23395392
Itgb2Ratendodermal cell differentiation involved_inISORGD:13136941624291 PMID:23154389RGDPMID:23154389
Itgb2Ratendodermal cell differentiation involved_inIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratendothelial cell migration  IMP 1582375 RGD 
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Cellular Component
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Itgb2Ratcell surface  IDA 1582375 RGD 
Itgb2Ratcell surface located_inIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratcell surface located_inISORGD:13136951624291 PMID:17023661RGDPMID:17023661
Itgb2Ratcell surface is_active_inIBAMGI:96610|MGI:96611|MGI:96612|MGI:96613|MGI:96615|PANTHER:PTN000801545|RGD:1305581|RGD:2927|RGD:628868|UniProtKB:P05106|UniProtKB:P05107|UniProtKB:P05556|UniProtKB:P16144|UniProtKB:P18084|UniProtKB:P26010|UniProtKB:P26012|WB:WBGene000039301600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratcell surface located_inISORGD:13136941624291 PMID:19029120, PMID:19234460, PMID:20563599, PMID:23620790RGDPMID:19029120|PMID:19234460|PMID:20563599|PMID:23620790
Itgb2Ratcell surface  IDA 1625386 RGD 
Itgb2Ratexternal side of plasma membrane located_inISORGD:13136951624291 PMID:19299737RGDPMID:19299737
Itgb2Ratfocal adhesion is_active_inIBAFB:FBgn0004657|MGI:96612|MGI:96614|PANTHER:PTN000801545|RGD:2927|RGD:628868|UniProtKB:P05106|UniProtKB:P07228|UniProtKB:P18564|WB:WBGene000039301600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratintegrin alphaL-beta2 complex part_ofISORGD:13136941624291 PMID:19029120RGDPMID:19029120
Itgb2Ratintegrin alphaL-beta2 complex part_ofIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratintegrin alphaM-beta2 complex part_ofISORGD:13136941624291 PMID:18083624RGDPMID:18083624
Itgb2Ratintegrin alphaM-beta2 complex part_ofIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratintegrin alphaM-beta2 complex part_ofISORGD:13136951624291 PMID:20199584RGDPMID:20199584
Itgb2Ratintegrin alphaX-beta2 complex part_ofISORGD:13136941624291 PMID:20033057RGDPMID:20033057
Itgb2Ratintegrin alphaX-beta2 complex part_ofIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratintegrin complex part_ofIBAFB:FBgn0004657|FB:FBgn0010395|MGI:1338035|MGI:96610|MGI:96611|MGI:96613|MGI:96614|MGI:96615|PANTHER:PTN000801545|RGD:2927|RGD:628868|UniProtKB:P05106|UniProtKB:P05107|UniProtKB:P05556|UniProtKB:P18084|UniProtKB:P18564|UniProtKB:P26010|UniProtKB:P26012|WB:WBGene00003930|ZFIN:ZDB-GENE-071207-21600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratmembrane located_inISORGD:13136951624291 PMID:10601245, PMID:23395392RGDPMID:10601245|PMID:23395392
Itgb2Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Itgb2Ratmembrane raft located_inIEAUniProtKB-SubCell:SL-03701600115GO_REF:0000044UniProtGO_REF:0000044
Itgb2Ratmembrane raft located_inISORGD:13136951624291 PMID:10601245RGDPMID:10601245
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Molecular Function
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Itgb2Ratamyloid-beta binding enablesISORGD:13136951624291 PMID:18981818RGDPMID:18981818
Itgb2Ratamyloid-beta binding enablesIBAMGI:96611|PANTHER:PTN0025607161600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratcargo receptor activity contributes_toISORGD:13136951624291 PMID:20199584RGDPMID:20199584
Itgb2Ratcell adhesion molecule binding contributes_toIMP 1582375Icam1 bindingRGD 
Itgb2Ratcell adhesion molecule binding enablesIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratcell adhesion molecule binding enablesISORGD:13136941624291 PMID:19029120RGDPMID:19029120
Itgb2Ratcomplement component C3b binding enablesISORGD:13136951624291UniProtKB:P01027 PMID:20199584RGDPMID:20199584
Itgb2Ratheat shock protein binding enablesISORGD:13136941624291UniProtKB:P50142 PMID:12496435RGDPMID:12496435
Itgb2Ratheat shock protein binding enablesIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2RatICAM-3 receptor activity enablesISORGD:13136941624291 PMID:19029120RGDPMID:19029120
Itgb2RatICAM-3 receptor activity enablesIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratintegrin binding enablesIBAMGI:96610|MGI:96612|MGI:96614|MGI:96615|PANTHER:PTN000801545|RGD:2927|UniProtKB:P051061600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratprotein binding enablesISORGD:13136941624291UniProtKB:A8MQ03|UniProtKB:O75841|UniProtKB:P00519|UniProtKB:P0DPK4|UniProtKB:P11215|UniProtKB:P13796|UniProtKB:P20702|UniProtKB:P21333|UniProtKB:P35241|UniProtKB:P60033|UniProtKB:P60410|UniProtKB:Q14145|UniProtKB:Q15323|UniProtKB:Q15582|UniProtKB:Q15762|UniProtKB:Q3SYB3|UniProtKB:Q6UY14-3|UniProtKB:Q7Z3S9|UniProtKB:Q8N6Q3|UniProtKB:Q8TAF8|UniProtKB:Q96CE8|UniProtKB:Q9BQE5|UniProtKB:Q9BX67|UniProtKB:Q9GZW8|UniProtKB:Q9H2K0|UniProtKB:Q9UN30-2|UniProtKB:Q9Y4G6 PMID:12208882, PMID:12796480, PMID:16831868, PMID:17321526, PMID:18083624, PMID:19234221, PMID:19828450, PMID:20033057, PMID:20183869, PMID:20679211, PMID:21193407, PMID:25416956, PMID:25910212, more ...RGDPMID:12208882|PMID:12796480|PMID:16831868|PMID:17321526|PMID:18083624|PMID:19234221|PMID:19828450|PMID:20033057|PMID:20183869|PMID:20679211|PMID:21193407|PMID:25416956|PMID:25910212|PMID:28807980|PMID:31515488|PMID:32296183|PMID:32814053
Itgb2Ratprotein binding enablesISORGD:13136951624291UniProtKB:P09055|UniProtKB:P20491|UniProtKB:P35762|UniProtKB:P40240|UniProtKB:Q08857|UniProtKB:Q8K1B8 PMID:19234461, PMID:23395392RGDPMID:19234461|PMID:23395392
Itgb2Ratprotein kinase binding enablesISORGD:13136941624291UniProtKB:P43405 PMID:12885943RGDPMID:12885943
Itgb2Ratprotein kinase binding enablesIEAUniProtKB:P05107|ensembl:ENSP000004987801600115GO_REF:0000107EnsemblGO_REF:0000107
Itgb2Ratprotein kinase binding enablesIBAPANTHER:PTN002560716|UniProtKB:P051071600115GO_REF:0000033GO_CentralGO_REF:0000033
Itgb2Ratprotein-containing complex binding  IPIRGD:6314241600245heterodimerizationRGD 
Itgb2Ratprotein-containing complex binding  IPIRGD:29261600245heterodimerizationRGD 
Itgb2Ratprotein-containing complex binding  IPIRGD:710751600245heterodimerizationRGD 
1 to 20 of 21 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itgb2Ratintegrin mediated signaling pathway   ISORGD:13136945135538 RGD 
Itgb2Ratintegrin mediated signaling pathway   ISORGD:13136941358329 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itgb2RatEntamoebiasis pathway  IEA 6907045 KEGGrno:05146
Itgb2RatLeishmaniasis pathway  IEA 6907045 KEGGrno:05140
Itgb2Ratmalaria pathway  IEA 6907045 KEGGrno:05144
Itgb2Ratmyocarditis pathway  IEA 6907045 KEGGrno:05416
Itgb2Ratphagocytosis pathway  IEA 6907045 KEGGrno:04145
Itgb2Ratrheumatoid arthritis pathway  IEA 6907045 KEGGrno:05323
Itgb2RatStaphylococcus aureus infection pathway  IEA 6907045 KEGGrno:05150
Itgb2Rattuberculosis pathway  IEA 6907045 KEGGrno:05152

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Itgb2Rathypoxia inducible factor pathway   ISORGD:13136946484113 PIDPID:200202

1 to 20 of 56 rows
#
Reference Title
Reference Citation
1. Altered gene expression in leukocyte transendothelial migration and cell communication pathways in periodontitis-affected gingival tissues. Abe D, etal., J Periodontal Res. 2011 Jun;46(3):345-53. doi: 10.1111/j.1600-0765.2011.01349.x. Epub 2011 Mar 7.
2. Point mutations impairing cell surface expression of the common beta subunit (CD18) in a patient with leukocyte adhesion molecule (Leu-CAM) deficiency. Arnaout MA, etal., J Clin Invest. 1990 Mar;85(3):977-81.
3. Soluble Jagged-1 inhibits neointima formation by attenuating Notch-Herp2 signaling. Caolo V, etal., Arterioscler Thromb Vasc Biol. 2011 May;31(5):1059-65. Epub 2011 Feb 17.
4. Regulation of LFA-1-dependent inflammatory cell recruitment by Cbl-b and 14-3-3 proteins. Choi EY, etal., Blood. 2008 Apr 1;111(7):3607-14. doi: 10.1182/blood-2007-07-103077. Epub 2008 Jan 31.
5. Increased expression of intercellular adhesion molecule-1 (ICAM-1) in a murine model of pulmonary eosinophilia and high IgE level. Chu HW, etal., Clin Exp Immunol. 1995 May;100(2):319-24.
6. Low-density array PCR analysis of reperfusion biopsies: an adjunct to histological analysis. Cravedi P, etal., Nephrol Dial Transplant. 2010 Dec;25(12):4077-86. Epub 2010 May 26.
7. Regulation of CD18 expression on neutrophils in response to fluid shear stress. Fukuda S and Schmid-Schonbein GW, Proc Natl Acad Sci U S A. 2003 Nov 11;100(23):13152-7. Epub 2003 Oct 31.
8. Inhibitory effect of olopatadine on antigen-induced eosinophil infiltration and the LFA-1 and Mac-1 expression in eosinophils. Fukuishi N, etal., Jpn J Pharmacol. 2002 Apr;88(4):463-6.
9. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10. Characterization of three new membrane structures on rat NK cells which are involved in activation of the lytic machinery. Giezeman-Smits KM, etal., Immunobiology. 1997 Nov;197(5):429-43.
11. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
12. Mac-1 (CD11b/CD18) links inflammation and thrombosis after glomerular injury. Hirahashi J, etal., Circulation. 2009 Sep 29;120(13):1255-65. Epub 2009 Sep 14.
13. Unique CD18 mutations involving a deletion in the extracellular stalk region and a major truncation of the cytoplasmic domain in a patient with leukocyte adhesion deficiency type 1. Hixson P, etal., Blood. 2004 Feb 1;103(3):1105-13. Epub 2003 Sep 25.
14. Effects of monoclonal antibodies to adhesion molecules on eosinophilic myocarditis in Toxocara canis-infected CBA/J mice. Hokibara S, etal., Clin Exp Immunol. 1998 Nov;114(2):236-44.
15. Integrins: bidirectional, allosteric signaling machines. Hynes RO Cell 2002 Sep 20;110(6):673-87.
16. Treatment of established adjuvant arthritis in rats with monoclonal antibody to CD18 and very late activation antigen-4 integrins suppresses neutrophil and T-lymphocyte migration to the joints and improves clinical disease. Issekutz AC, etal., Immunology. 1996 Aug;88(4):569-76.
17. Loss of LFA-1, but not Mac-1, protects MRL/MpJ-Fas(lpr) mice from autoimmune disease. Kevil CG, etal., Am J Pathol. 2004 Aug;165(2):609-16.
18. [Circulating adhesion molecules (cICAM-1, lcVCAM-1) in patients with suspected inflammatory heart muscle disease]. Klein RM, etal., Z Kardiol. 1998 Feb;87(2):84-93.
19. Leukocyte recruitment in hepatic injury: selectin-mediated leukocyte rolling is a prerequisite for CD18-dependent firm adhesion. Klintman D, etal., J Hepatol. 2002 Jan;36(1):53-9.
20. Association of a CD18 gene polymorphism with a reduced risk of restenosis after coronary stenting. Koch W, etal., Am J Cardiol. 2001 Nov 15;88(10):1120-4.
1 to 20 of 56 rows
PMID:10528208   PMID:10601245   PMID:12477932   PMID:12496435   PMID:12652296   PMID:12885943   PMID:15210787   PMID:15249579   PMID:15457581   PMID:16093349   PMID:16937496   PMID:17023661  
PMID:18759008   PMID:18981818   PMID:19029120   PMID:19234460   PMID:19299737   PMID:19342649   PMID:19703720   PMID:19946888   PMID:20183869   PMID:20199584   PMID:20458337   PMID:20563599  
PMID:21180156   PMID:21193407   PMID:21207857   PMID:22778269   PMID:22871113   PMID:23154389   PMID:23382219   PMID:23395392   PMID:23620790   PMID:23830386   PMID:23981064   PMID:24458438  
PMID:24769233   PMID:25453580   PMID:28807980  



Itgb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82011,061,009 - 11,097,242 (-)NCBIGRCr8
mRatBN7.22011,061,394 - 11,097,656 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2011,061,430 - 11,097,600 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2011,760,914 - 11,797,085 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02011,121,883 - 11,158,052 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02011,593,622 - 11,629,796 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02011,777,773 - 11,815,647 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2011,777,783 - 11,815,647 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02013,944,190 - 13,981,048 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42011,446,521 - 11,485,009 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12011,446,936 - 11,485,236 (-)NCBI
Celera2012,564,941 - 12,601,097 (-)NCBICelera
Cytogenetic Map20p12NCBI
ITGB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382144,885,953 - 44,928,815 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2144,885,953 - 44,931,989 (-)EnsemblGRCh38hg38GRCh38
GRCh372146,305,868 - 46,348,730 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362145,130,296 - 45,165,303 (-)NCBINCBI36Build 36hg18NCBI36
Build 342145,130,313 - 45,165,232NCBI
Celera2131,412,498 - 31,455,256 (-)NCBICelera
Cytogenetic Map21q22.3NCBI
HuRef2131,679,225 - 31,721,357 (-)NCBIHuRef
CHM1_12145,866,651 - 45,909,349 (-)NCBICHM1_1
T2T-CHM13v2.02143,246,634 - 43,289,593 (-)NCBIT2T-CHM13v2.0
Itgb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391077,366,164 - 77,401,542 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1077,366,086 - 77,401,542 (+)EnsemblGRCm39 Ensembl
GRCm381077,530,329 - 77,565,708 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1077,530,252 - 77,565,708 (+)EnsemblGRCm38mm10GRCm38
MGSCv371076,993,093 - 77,028,419 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361076,985,685 - 77,009,099 (+)NCBIMGSCv36mm8
Celera1078,572,639 - 78,608,564 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Itgb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540741,777,777 - 41,800,201 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540741,779,849 - 41,805,637 (-)NCBIChiLan1.0ChiLan1.0
ITGB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22240,933,241 - 40,976,107 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12135,804,383 - 35,839,245 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02131,181,228 - 31,216,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12144,470,999 - 44,505,963 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2144,470,999 - 44,505,963 (-)Ensemblpanpan1.1panPan2
ITGB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13138,520,733 - 38,547,003 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3138,521,103 - 38,547,018 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3137,718,851 - 37,741,911 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03138,125,566 - 38,152,274 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3138,125,550 - 38,148,633 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13137,988,075 - 38,014,617 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03137,949,217 - 37,972,818 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03138,463,168 - 38,490,402 (-)NCBIUU_Cfam_GSD_1.0
Itgb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497137,819,024 - 37,843,866 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367781,286,341 - 1,311,194 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367781,286,475 - 1,311,184 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITGB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13207,512,950 - 207,544,107 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113207,514,281 - 207,544,108 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213217,446,055 - 217,475,887 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ITGB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1288,597,554 - 88,644,890 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl288,597,556 - 88,624,025 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605416,774,420 - 16,821,705 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Itgb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474530,452,576 - 30,470,611 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474530,452,576 - 30,479,036 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Itgb2
346 total Variants

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:71
Interacting mature miRNAs:88
Transcripts:ENSRNOT00000001639
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126123605Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804241029322208Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20460660717617956Rat
631265Iresp1Immunoglobin response QTL18.3blood anti-double stranded DNA antibody amount (VT:0004762)serum anti-DNA antibody level (CMO:0001533)20903971913461775Rat

1 to 10 of 24 rows
Itgb2  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22011,061,745 - 11,061,853 (+)MAPPERmRatBN7.2
Rnor_6.02011,778,099 - 11,778,206NCBIRnor6.0
Rnor_5.02013,944,516 - 13,944,623UniSTSRnor5.0
RGSC_v3.42011,446,847 - 11,446,954UniSTSRGSC3.4
Celera2012,565,267 - 12,565,374UniSTS
Cytogenetic Map20p12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 47 113 91 90 59 25 59 6 216 95 93 45 60 31



Ensembl Acc Id: ENSRNOT00000001639   ⟹   ENSRNOP00000001639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2011,061,430 - 11,097,600 (-)Ensembl
Rnor_6.0 Ensembl2011,777,783 - 11,815,647 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101048   ⟹   ENSRNOP00000081713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2011,061,430 - 11,067,731 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119404   ⟹   ENSRNOP00000082439
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2011,061,430 - 11,080,548 (-)Ensembl
RefSeq Acc Id: NM_001037780   ⟹   NP_001032869
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82011,061,009 - 11,097,182 (-)NCBI
mRatBN7.22011,061,420 - 11,097,600 (-)NCBI
Rnor_6.02011,777,773 - 11,815,647 (-)NCBI
Rnor_5.02013,944,190 - 13,981,048 (-)NCBI
RGSC_v3.42011,446,521 - 11,485,009 (-)RGD
Celera2012,564,941 - 12,601,097 (-)RGD
Sequence:
RefSeq Acc Id: XM_039098729   ⟹   XP_038954657
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82011,061,009 - 11,097,242 (-)NCBI
mRatBN7.22011,061,394 - 11,097,656 (-)NCBI
RefSeq Acc Id: XM_039098730   ⟹   XP_038954658
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82011,061,009 - 11,097,205 (-)NCBI
mRatBN7.22011,061,394 - 11,097,608 (-)NCBI
RefSeq Acc Id: XM_063279156   ⟹   XP_063135226
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82011,061,009 - 11,096,160 (-)NCBI
RefSeq Acc Id: NP_001032869   ⟸   NM_001037780
- Peptide Label: precursor
- UniProtKB: B2RYB8 (UniProtKB/TrEMBL),   F7F4S8 (UniProtKB/TrEMBL),   A0A9K3Y824 (UniProtKB/TrEMBL),   A6JK86 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001639   ⟸   ENSRNOT00000001639
RefSeq Acc Id: XP_038954657   ⟸   XM_039098729
- Peptide Label: isoform X1
- UniProtKB: F7F4S8 (UniProtKB/TrEMBL),   B2RYB8 (UniProtKB/TrEMBL),   A0A9K3Y824 (UniProtKB/TrEMBL),   A6JK86 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038954658   ⟸   XM_039098730
- Peptide Label: isoform X1
- UniProtKB: F7F4S8 (UniProtKB/TrEMBL),   B2RYB8 (UniProtKB/TrEMBL),   A0A9K3Y824 (UniProtKB/TrEMBL),   A6JK86 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081713   ⟸   ENSRNOT00000101048
Name Modeler Protein Id AA Range Protein Structure
AF-B2RYB8-F1-model_v2 AlphaFold B2RYB8 1-768 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13701505
Promoter ID:EPDNEW_R12029
Type:initiation region
Name:Itgb2_1
Description:integrin subunit beta 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02011,815,664 - 11,815,724EPDNEW


1 to 40 of 58 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-4238 BioCyc
Ensembl Genes ENSRNOG00000001224 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000001639 ENTREZGENE
  ENSRNOT00000001639.7 UniProtKB/TrEMBL
  ENSRNOT00000101048.1 UniProtKB/TrEMBL
  ENSRNOT00000119404 ENTREZGENE
  ENSRNOT00000119404.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.410 UniProtKB/TrEMBL
  4.10.1240.30 UniProtKB/TrEMBL
  6.20.50.10 UniProtKB/TrEMBL
  Cytochrome c1, transmembrane anchor, C-terminal UniProtKB/TrEMBL
  Laminin UniProtKB/TrEMBL
  ligand-binding face of the semaphorins, domain 2 UniProtKB/TrEMBL
  ntegrin, alpha v. Chain A, domain 3 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7124173 IMAGE-MGC_LOAD
  IMAGE:7932515 IMAGE-MGC_LOAD
InterPro Integin_beta_N UniProtKB/TrEMBL
  Integrin_bsu UniProtKB/TrEMBL
  Integrin_bsu-2_C UniProtKB/TrEMBL
  Integrin_bsu_cyt UniProtKB/TrEMBL
  Integrin_bsu_N UniProtKB/TrEMBL
  Integrin_bsu_tail UniProtKB/TrEMBL
  Integrin_bsu_tail_dom_sf UniProtKB/TrEMBL
  Integrin_dom UniProtKB/TrEMBL
  Plexin-like_fold UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/TrEMBL
KEGG Report rno:309684 UniProtKB/TrEMBL
MGC_CLONE MGC:188433 IMAGE-MGC_LOAD
  MGC:94072 IMAGE-MGC_LOAD
NCBI Gene 309684 ENTREZGENE
PANTHER Integrin_beta_C UniProtKB/TrEMBL
  PTHR10082:SF15 UniProtKB/TrEMBL
Pfam Integrin_b_cyt UniProtKB/TrEMBL
  Integrin_B_tail UniProtKB/TrEMBL
  Integrin_beta UniProtKB/TrEMBL
  PSI_integrin UniProtKB/TrEMBL
PhenoGen Itgb2 PhenoGen
PIRSF Integrin_B UniProtKB/TrEMBL
PRINTS INTEGRINB UniProtKB/TrEMBL
PROSITE INTEGRIN_BETA UniProtKB/TrEMBL
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-18 Itgb2  integrin subunit beta 2  Itgb2  integrin, beta 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-12-15 Itgb2  integrin, beta 2  Itgb2  integrin beta 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Itgb2  integrin beta 2  Itgb2_predicted  integrin beta 2 (predicted)  Symbol and Name updated 1559027 APPROVED