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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of muscle organ development
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Accession:GO:0048634 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle development.


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regulation of muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:200,001,162...200,005,539
Ensembl chr 1:200,001,261...200,005,187 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
negative regulation of muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 IDA RGD PMID:19057004 RGD:2306938 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 involved_in ISO
ISS		 (PMID:23349461)
GO_REF:0000024		 RGD
UniProt		 PMID:23349461 GO_REF:0000024 NCBI chr16:5,889,046...6,009,860
Ensembl chr16:5,890,782...6,006,605 		JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:16723531 RGD:1580249 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14749725)
GO_REF:0000107		 RGD
Ensembl		 PMID:14749725 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16936075)		 Ensembl
RGD		 PMID:16936075 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Luc7l LUC7-like acts_upstream_of_or_within ISO (PMID:15474286) RGD PMID:15474286 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
IEA		 (PMID:12887892)
GO_REF:0000107		 RGD
Ensembl		 PMID:12887892 GO_REF:0000107 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Sox15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO (PMID:10821863) RGD PMID:10821863 NCBI chr10:54,373,045...54,374,749
Ensembl chr10:54,372,403...54,376,591 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) RGD PMID:9520323 MGI:1201268 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (PMID:24364879) RGD PMID:24364879 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24364879)		 Ensembl
RGD		 PMID:24364879 GO_REF:0000107 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525 		JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2676327 (PMID:15601660) RGD PMID:15601660 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO (PMID:14565952) RGD PMID:14565952 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:2388350|PMID:12399320)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 involved_in ISO (MGI:1861885|PMID:10949023) RGD PMID:10949023 MGI:1861885 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904 		JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F acts_upstream_of_or_within ISO (PMID:10373470) RGD PMID:10373470 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (PMID:25715398) RGD PMID:25715398 NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Rpl3l ribosomal protein L3-like involved_in ISO (MGI:7434897|PMID:34081545) RGD PMID:34081545 MGI:7434897 NCBI chr10:13,753,914...13,764,458
Ensembl chr10:13,753,886...13,764,457 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (PMID:11711431) RGD PMID:11711431 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (PMID:11711431) RGD PMID:11711431 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      regulation of developmental process 2755
        regulation of muscle organ development 25
          negative regulation of muscle organ development + 12
          positive regulation of muscle organ development + 4
          regulation of branchiomeric skeletal muscle development + 0
          regulation of extraocular skeletal muscle development + 0
          regulation of somitomeric trunk muscle development + 0
          regulation of striated muscle tissue development + 20
          regulation of ureter smooth muscle cell differentiation + 1
Path 2
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      anatomical structure development 6486
        animal organ development 3650
          muscle organ development 382
            regulation of muscle organ development 25
              negative regulation of muscle organ development + 12
              positive regulation of muscle organ development + 4
              regulation of branchiomeric skeletal muscle development + 0
              regulation of extraocular skeletal muscle development + 0
              regulation of somitomeric trunk muscle development + 0
              regulation of striated muscle tissue development + 20
              regulation of ureter smooth muscle cell differentiation + 1
paths to the root