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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of striated muscle tissue development
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Accession:GO:0016202 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of striated muscle development.


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regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F acts_upstream_of_or_within ISO (MGI:1339480|PMID:10373470) RGD PMID:10373470 MGI:1339480 NCBI chr13:101,184,127...101,229,714 JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:45,964,311...46,041,477 JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 1:81,196,532...81,212,848 JBrowse link
negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:200,001,261...200,005,187 JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:244,584,477...244,590,359 JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:2676890 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr 2:190,582,885...190,593,509 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848 JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) RGD PMID:20124407 MGI:4838954 NCBI chr  X:104,217,898...104,277,935 JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) RGD PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 6:50,674,910...50,676,904 JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5315325|PMID:21971047)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21971047 GO_REF:0000024 GO_REF:0000107 MGI:5315325 NCBI chr 8:109,190,727...109,201,761 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668 JBrowse link
G Ybx3 Y box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3808638|PMID:18676817)
Ensembl
RGD
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 4:165,129,747...165,153,101 JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:16723531 RGD:1580249 NCBI chr 3:96,165,042...96,215,621 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14749725)
GO_REF:0000107
RGD
Ensembl
PMID:14749725 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494 JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:128,923,918...128,962,025 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3656361|PMID:16936075)
Ensembl
RGD
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 2:219,666,549...219,779,815 JBrowse link
G Luc7l LUC7-like acts_upstream_of_or_within ISO (MGI:3055693|PMID:15474286) RGD PMID:15474286 MGI:3055693 NCBI chr10:15,273,340...15,307,131 JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:12887892) RGD PMID:12887892 NCBI chr 1:84,053,883...84,076,975 JBrowse link
G Sox15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:1858709|PMID:10821863) RGD PMID:10821863 MGI:1858709 NCBI chr10:54,373,602...54,376,591 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) RGD PMID:9520323 MGI:1201268 NCBI chr 6:50,674,910...50,676,904 JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:5571433|PMID:24364879) RGD PMID:24364879 MGI:5571433 NCBI chr 9:65,903,511...65,972,562 JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5571433|PMID:24364879)
Ensembl
RGD
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 7:994,549...1,015,876 JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012 JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684 JBrowse link
G Myf5 myogenic factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,802,946...42,806,177 JBrowse link
G Myf6 myogenic factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,813,008...42,814,852 JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,884,864...96,887,574 JBrowse link
G Myog myogenin involved_in IBA
ISO
ISS
PMID:21873635
(MGI:62381|PMID:8393145)
GO_REF:0000024
RGD
UniProt
PMID:8393145, PMID:21873635 GO_REF:0000024 MGI:62381, RGD:13792537 NCBI chr13:45,745,455...45,748,044 JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:151,217,049...151,227,180 JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:33,775,123...33,861,635 JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5619733|PMID:23460868)
Ensembl
RGD
PMID:23460868 GO_REF:0000107 MGI:5619733 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:2,917,864...2,927,993 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19388010 RGD:2317940 NCBI chr 2:27,997,523...28,018,983 JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:9770491)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9770491 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO MGI:3029359 (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr 2:54,240,298...54,275,978 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399)
Ensembl
RGD
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668 JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) RGD PMID:11856745 MGI:2179189 NCBI chr10:44,034,174...44,078,463 JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) RGD PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:202,159,081...202,175,012 JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:55,642,459...55,644,501 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5608606|PMID:25220152)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25220152 GO_REF:0000024 GO_REF:0000107 MGI:5608606 NCBI chr 1:56,312,062...56,320,177 JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6120647|PMID:29440408)
Ensembl
RGD
PMID:29440408 GO_REF:0000107 MGI:6120647 NCBI chr 1:197,814,409...197,831,802 JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964 JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992 JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IMP RGD PMID:16408196 RGD:1643018 NCBI chr10:71,323,777...71,367,908 JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2676327 (MGI:3513707|PMID:15601660) RGD PMID:15601660 MGI:3513707 NCBI chr20:35,756,007...35,768,481 JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO (PMID:14565952) RGD PMID:14565952 NCBI chr10:1,116,315...1,278,106 JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 involved_in ISO (MGI:1861885|PMID:10949023) RGD PMID:10949023 MGI:1861885 NCBI chr 3:151,994,768...152,058,941 JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEP PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 3:42,978,558...43,097,892 JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:50,605,231...50,755,441 JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4881345 (MGI:4879035|PMID:21177349) RGD PMID:21177349 MGI:4879035 NCBI chr 1:254,785,956...254,978,967 JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      regulation of developmental process 2662
        regulation of muscle organ development 54
          regulation of striated muscle tissue development 50
            negative regulation of striated muscle tissue development + 16
            positive regulation of striated muscle tissue development + 27
            regulation of cardiac muscle tissue development + 5
            regulation of skeletal muscle tissue development + 33
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      anatomical structure development 6195
        multicellular organism development 5632
          system development 5300
            animal organ development 4060
              muscle organ development 352
                regulation of muscle organ development 54
                  regulation of striated muscle tissue development 50
                    negative regulation of striated muscle tissue development + 16
                    positive regulation of striated muscle tissue development + 27
                    regulation of cardiac muscle tissue development + 5
                    regulation of skeletal muscle tissue development + 33
paths to the root