.
beta-tubulin binding - Ontology Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:beta-tubulin binding
go back to main search page
Accession:GO:0048487 term browser browse the term
Definition:Binding to the microtubule constituent protein beta-tubulin.

 Loading Annotations... 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
X

show annotations for term's descendants           Sort by:
beta-tubulin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07058934.1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:134,031,240...134,031,542 JBrowse link
G Adnp activity-dependent neuroprotector homeobox IPI RGD PMID:16893427 RGD:2312776 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312 		JBrowse link
G Akap1 A-kinase anchoring protein 1 IDA RGD PMID:12096916 RGD:2313124 NCBI chr10:73,621,021...73,654,123
Ensembl chr10:73,621,883...73,653,896 		JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 enables ISO (PMID:26583432) RGD PMID:26583432 NCBI chr16:2,118,503...2,166,741
Ensembl chr16:2,121,255...2,166,692 		JBrowse link
G Arl8b ARF like GTPase 8B enables ISO
IEA 		(PMID:15331635)
GO_REF:0000107 		RGD
Ensembl		 PMID:15331635 GO_REF:0000107 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596 		JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 enables ISO UniProtKB:P69893 (PMID:7744867) RGD PMID:7744867 NCBI chr 5:60,731,601...60,778,456
Ensembl chr 5:55,935,615...55,982,461 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 enables ISO (PMID:17574030) RGD PMID:17574030 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor enables ISO
IEA 		(PMID:22300583)
GO_REF:0000107 		RGD
Ensembl		 PMID:22300583 GO_REF:0000107 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080 		JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 enables ISO
IEA 		UniProtKB:P07437 (PMID:24375412)
GO_REF:0000107 		RGD
Ensembl		 PMID:24375412 GO_REF:0000107 NCBI chr 2:82,591,750...82,602,903
Ensembl chr 2:82,590,630...82,602,930 		JBrowse link
G Cimap3 ciliary microtubule associated protein 3 enables ISO
IEA 		(PMID:20643351)
GO_REF:0000107 		RGD
Ensembl		 PMID:20643351 GO_REF:0000107 NCBI chr 2:193,475,785...193,493,092
Ensembl chr 2:193,475,782...193,493,139 		JBrowse link
G Dlec1 DLEC1 cilia and flagella associated protein enables IEA
ISO 		GO_REF:0000107
(PMID:33144677) 		Ensembl
RGD		 PMID:33144677 GO_REF:0000107 NCBI chr 8:118,826,429...118,873,183
Ensembl chr 8:118,826,466...118,873,655 		JBrowse link
G Dnai7 dynein axonemal intermediate chain 7 enables IBA
ISO 		GO_REF:0000033
(PMID:17974961) 		GO_Central
RGD		 PMID:17974961 GO_REF:0000033 NCBI chr 4:178,143,499...178,179,871
Ensembl chr 4:178,143,500...178,179,980 		JBrowse link
G Emd emerin enables IEA
ISO
IBA 		GO_REF:0000107
(PMID:17785515)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:17785515 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807 		JBrowse link
G Eml4 EMAP like 4 enables ISO
IEA 		(PMID:31409757)
GO_REF:0000107 		RGD
Ensembl		 PMID:31409757 GO_REF:0000107 NCBI chr 6:11,219,545...11,334,824
Ensembl chr 6:11,219,566...11,334,879 		JBrowse link
G Fgf13 fibroblast growth factor 13 enables ISS
ISO
IEA 		GO_REF:0000024
(PMID:22726441)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22726441 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Gabarap GABA type A receptor-associated protein enables ISO (PMID:9892355) RGD PMID:9892355 NCBI chr10:54,714,777...54,718,099
Ensembl chr10:54,714,198...54,717,765 		JBrowse link
G Gja1 gap junction protein, alpha 1 enables ISO (PMID:15084279) RGD PMID:15084279 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gjb6 gap junction protein, beta 6 enables ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:31,284,561...31,294,552
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Hdac6 histone deacetylase 6 enables ISO
IEA 		(PMID:12606581)
GO_REF:0000107 		RGD
Ensembl		 PMID:12606581 GO_REF:0000107 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Htt huntingtin enables IEA
ISO 		GO_REF:0000107
(PMID:11870213) 		Ensembl
RGD		 PMID:11870213 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Ift74 intraflagellar transport 74 enables ISO
IBA
IEA 		(PMID:23990561)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107 		RGD
GO_Central
InterPro
Ensembl		 PMID:23990561 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833 		JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing enables ISO
ISS
IEA 		(PMID:12762840)
GO_REF:0000024
GO_REF:0000107 		RGD
HGNC-UCL
Ensembl		 PMID:12762840 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:9,859,816...9,942,294
Ensembl chr 6:9,859,867...9,942,293 		JBrowse link
G Map1s microtubule-associated protein 1S enables ISO (PMID:12762840) RGD PMID:12762840 NCBI chr16:18,516,759...18,527,777
Ensembl chr16:18,517,574...18,527,988 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 enables IEA
ISO 		GO_REF:0000107
(PMID:18331715) 		Ensembl
RGD		 PMID:18331715 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Pacrg parkin coregulated enables ISO
IEA 		(PMID:14532270)
GO_REF:0000107 		RGD
Ensembl		 PMID:14532270 GO_REF:0000107 NCBI chr 1:49,882,671...50,305,564
Ensembl chr 1:49,882,630...50,305,430 		JBrowse link
G Pdcd5 programmed cell death 5 enables ISO UniProtKB:P07437 (PMID:24375412) RGD PMID:24375412 NCBI chr 1:88,305,869...88,311,200
Ensembl chr 1:88,305,869...88,311,200 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 enables ISO
IEA 		UniProtKB:Q767L7 (PMID:21525035)
GO_REF:0000107 		RGD
Ensembl		 PMID:21525035 GO_REF:0000107 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Racgap1 Rac GTPase-activating protein 1 enables ISO
IEA 		(PMID:11085985)
GO_REF:0000107 		RGD
Ensembl		 PMID:11085985 GO_REF:0000107 NCBI chr 7:130,750,936...130,780,891
Ensembl chr 7:130,750,936...130,780,831 		JBrowse link
G Ranbp10 RAN binding protein 10 enables ISO
IEA 		(PMID:18347012)
GO_REF:0000107 		RGD
Ensembl		 PMID:18347012 GO_REF:0000107 NCBI chr19:33,656,046...33,716,864
Ensembl chr19:33,656,046...33,717,033 		JBrowse link
G Rgs2 regulator of G-protein signaling 2 IPI RGD PMID:16820281 RGD:7207368 NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385 		JBrowse link
G Slc6a2 solute carrier family 6 member 2 IDA RGD PMID:18800064 RGD:6218960 NCBI chr19:14,010,292...14,055,317
Ensembl chr19:14,010,386...14,050,357 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables ISO
IEA 		(PMID:11590136)
GO_REF:0000107 		RGD
Ensembl		 PMID:11590136 GO_REF:0000107 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Snca synuclein alpha IDA RGD PMID:18800064 RGD:6218960 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Sncb synuclein, beta IDA RGD PMID:18800064 RGD:6218960 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012 		JBrowse link
G Sncg synuclein, gamma IDA RGD PMID:18800064 RGD:6218960 NCBI chr16:9,706,765...9,712,072
Ensembl chr16:9,700,514...9,705,368 		JBrowse link
G Spast spastin enables ISS
ISO
IEA 		GO_REF:0000024
UniProtKB:Q9ERD7 (PMID:17389232), (PMID:26875866)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17389232 PMID:26875866 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954 		JBrowse link
G Syt11 synaptotagmin 11 enables IEA
ISO 		GO_REF:0000107
UniProtKB:Q6P9T8 (PMID:24882364) 		Ensembl
RGD		 PMID:24882364 GO_REF:0000107 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964 		JBrowse link
G Taok1 TAO kinase 1 enables ISO
IEA 		(PMID:12639963)
GO_REF:0000107 		RGD
Ensembl		 PMID:12639963 GO_REF:0000107 NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Tbca tubulin folding cofactor A enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:26,011,714...26,065,909
Ensembl chr 2:26,011,795...26,065,907 		JBrowse link
G Tbcd tubulin folding cofactor D enables ISO
IBA
IEA 		(PMID:10831612)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107 		RGD
GO_Central
InterPro
Ensembl		 PMID:10831612 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:106,717,340...106,874,126
Ensembl chr10:106,717,367...106,874,122 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 enables IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517 		JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 enables ISO
IEA 		(PMID:25959773)
GO_REF:0000107 		RGD
Ensembl		 PMID:25959773 GO_REF:0000107 NCBI chr 2:235,765,786...235,889,047
Ensembl chr 2:235,765,835...235,885,047 		JBrowse link
G Uxt ubiquitously-expressed, prefoldin-like chaperone enables ISO
ISS
IEA 		(PMID:12762840)
GO_REF:0000024
GO_REF:0000107 		RGD
HGNC-UCL
Ensembl		 PMID:12762840 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:1,126,110...1,138,670
Ensembl chr  X:1,126,162...1,138,663 		JBrowse link
G Vapb VAMP associated protein B and C enables ISO
ISS
IEA 		(PMID:17540579)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:17540579 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:162,535,974...162,578,747
Ensembl chr 3:162,535,905...162,573,763 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21102
    binding 18100
      protein binding 14914
        cytoskeletal protein binding 1068
          tubulin binding 408
            beta-tubulin binding 44
paths to the root