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Gene: Syt11 (synaptotagmin 11) Rattus norvegicus
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Symbol: Syt11
Name: synaptotagmin 11
Description: Predicted to have several functions, including beta-tubulin binding activity; phospholipid binding activity; and protein homodimerization activity. Involved in negative regulation of cellular component organization and negative regulation of dopamine secretion. Localizes to several cellular components, including the Schaffer collateral - CA1 synapse; integral component of presynaptic active zone membrane; and integral component of synaptic vesicle membrane. Orthologous to human SYT11 (synaptotagmin 11); INTERACTS WITH ammonium chloride; bis(2-ethylhexyl) phthalate; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: synaptotagmin XI; synaptotagmin-11; sytXI
Orthologs:
Homo sapiens (human) : SYT11 (synaptotagmin 11)  HGNC  Alliance
Mus musculus (house mouse) : Syt11 (synaptotagmin XI)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt11 (synaptotagmin 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT11 (synaptotagmin 11)
Canis lupus familiaris (dog) : SYT11 (synaptotagmin 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt11 (synaptotagmin 11)
Sus scrofa (pig) : SYT11 (synaptotagmin 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02188,112,301 - 188,138,180 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2188,112,286 - 188,138,177 (-)Ensembl
Rnor_5.02207,511,186 - 207,537,292 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,874,372 - 180,897,792 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12180,823,880 - 180,847,884 (-)NCBI
Celera2168,153,180 - 168,176,598 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Syt11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 62042
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-11-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.