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ONTOLOGY REPORT - ANNOTATIONS

Term:glutamine family amino acid catabolic process
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Accession:GO:0009065 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.
Synonyms:exact_synonym: glutamine family amino acid breakdown;   glutamine family amino acid catabolism;   glutamine family amino acid degradation


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arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:234,667,499...234,800,322
Ensembl chr 2:234,667,491...234,799,339 		JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2155424|MGI:2155425 (PMID:11209059)		 Ensembl
RGD		 PMID:11209059 GO_REF:0000107 NCBI chr 1:138,548,830...138,571,599
Ensembl chr 1:138,548,834...138,571,505 		JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IDA
IBA		 PMID:1383204
GO_REF:0000033		 GO_Central PMID:1383204 GO_REF:0000033, RGD:8553334 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IBA
IEA		 (PMID:7504305)
GO_REF:0000033
GO_REF:0000107
(MGI:3807772|PMID:1383204)		 RGD
GO_Central
Ensembl		 PMID:1383204 PMID:7504305 GO_REF:0000033 GO_REF:0000107 MGI:3807772 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA		 (PMID:1378832), (PMID:7488039)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:1378832 PMID:7488039 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15753084 GO_REF:0000033, RGD:8693655 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 involved_in TAS
IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14871882 PMID:15753084 GO_REF:0000033, RGD:1358311, RGD:8693655 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:153,089,717...153,117,146
Ensembl chr 5:153,089,717...153,117,146 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA		 (PMID:19839645)
GO_REF:0000033
PMID:12753071		 RGD
GO_Central		 PMID:19839645 PMID:12753071 PMID:12753071 GO_REF:0000033, RGD:1299508, RGD:1299508 NCBI chr 1:206,006,103...206,027,115
Ensembl chr 1:206,006,109...206,027,108 		JBrowse link
gamma-aminobutyrate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8999827 GO_REF:0000033, RGD:1625237 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA		 (PMID:17384644)
GO_REF:0000107		 RGD
Ensembl		 PMID:17384644 GO_REF:0000107 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO
IBA		 (PMID:11032875), (PMID:6121377)
GO_REF:0000033		 RGD
GO_Central		 PMID:6121377 PMID:11032875 GO_REF:0000033 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:4193185)		 Ensembl
RGD		 PMID:4193185 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994 		JBrowse link
glutamate catabolic process via 2-hydroxyglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16435184)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16435184 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:9,705,966...9,732,580
Ensembl chr 5:9,705,970...9,732,517 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase acts_upstream_of_or_within
involved_in		 TAS
ISO
IBA
IEA
ISS		 MGI:3514104 (PMID:16641247)
GO_REF:0000033
(MGI:5320252|PMID:22228304)
GO_REF:0000107
(PMID:22049910)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:16641247 PMID:22049910 PMID:22228304 PMID:1918000 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5320252, RGD:728510 NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900 		JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA		 (PMID:16616139)
GO_REF:0000033		 RGD
GO_Central		 PMID:16616139 GO_REF:0000033 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,830,900...151,876,948
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Prodh proline dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,909,617...151,925,760
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12288
      catabolic process 2807
        amino acid catabolic process 111
          alpha-amino acid catabolic process 96
            L-amino acid catabolic process 76
              glutamine family amino acid catabolic process 26
                arginine catabolic process + 10
                asparagine catabolic process + 1
                glutamate catabolic process + 6
                glutamine catabolic process 3
                proline catabolic process + 6
Path 2
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12288
      cellular metabolic process 10293
        organic acid metabolic process 1033
          oxoacid metabolic process 1022
            carboxylic acid metabolic process 1007
              carboxylic acid catabolic process 256
                alpha-amino acid catabolic process 96
                  L-amino acid catabolic process 76
                    glutamine family amino acid catabolic process 26
                      arginine catabolic process + 10
                      asparagine catabolic process + 1
                      glutamate catabolic process + 6
                      glutamine catabolic process 3
                      proline catabolic process + 6
paths to the root