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Gene: Iffo2 (intermediate filament family orphan 2) Rattus norvegicus
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Symbol: Iffo2
Name: intermediate filament family orphan 2
Description: Predicted to have 1-pyrroline-5-carboxylate dehydrogenase activity and oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Predicted to be involved in oxidation-reduction process and proline catabolic process to glutamate. Predicted to localize to the integral component of membrane and intermediate filament. Orthologous to human IFFO2 (intermediate filament family orphan 2); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 3-chloropropane-1,2-diol; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC641315; similar to mouse LOC212632
Orthologs:
Homo sapiens (human) : IFFO2 (intermediate filament family orphan 2)  HGNC  Alliance
Mus musculus (house mouse) : Iffo2 (intermediate filament family orphan 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Iffo2 (intermediate filament family orphan 2)
Pan paniscus (bonobo/pygmy chimpanzee) : IFFO2 (intermediate filament family orphan 2)
Canis lupus familiaris (dog) : IFFO2 (intermediate filament family orphan 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Iffo2 (intermediate filament family orphan 2)
Sus scrofa (pig) : IFFO2 (intermediate filament family orphan 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05158,042,587 - 158,083,311 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5158,042,587 - 158,135,733 (+)Ensembl
Rnor_5.05161,781,672 - 161,822,396 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45158,404,342 - 158,418,394 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5150,208,652 - 150,249,725 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Iffo2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1624207
Created: 2007-05-03
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.