Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic hemopoiesis
go back to main search page
Accession:GO:0035162 term browser browse the term
Definition:The stages of blood cell formation that take place within the embryo.
Synonyms:exact_synonym: embryonic haematopoiesis;   embryonic haemopoiesis;   embryonic hematopoiesis


show annotations for term's descendants           Sort by:
embryonic hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:11806972) 		UniProt
Ensembl
RGD		 PMID:11806972 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO
IEA 		MGI:6117856 (PMID:29115376)
GO_REF:0000107 		RGD
Ensembl		 PMID:29115376 GO_REF:0000107 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand involved_in ISO
IEA 		(PMID:21149635)
GO_REF:0000107 		RGD
Ensembl		 PMID:21149635 GO_REF:0000107 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:2429992 (PMID:9576834)
GO_REF:0000107 		RGD
Ensembl		 PMID:9576834 GO_REF:0000107 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO
IEA 		MGI:102811|MGI:2153826 (PMID:10631184), (PMID:7550312)
GO_REF:0000107 		RGD
Ensembl		 PMID:7550312 PMID:10631184 GO_REF:0000107 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO
IEA 		MGI:1857719 (PMID:16787915)
GO_REF:0000107 		RGD
Ensembl		 PMID:16787915 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il3 interleukin 3 involved_in ISO (PMID:21149635) RGD PMID:21149635 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO (PMID:16702405) RGD PMID:16702405 NCBI chr16:75,787,411...75,868,584
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Kdr kinase insert domain receptor involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:7596435)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:7596435 GO_REF:0000024 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO
IEA 		(PMID:20536544)
GO_REF:0000107 		RGD
Ensembl		 PMID:20536544 GO_REF:0000107 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Kitlg KIT ligand involved_in ISO
IEA 		(PMID:21149635)
GO_REF:0000107 		RGD
Ensembl		 PMID:21149635 GO_REF:0000107 NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557|MGI:1861107 (PMID:19409822), (PMID:7753194) RGD PMID:7753194 PMID:19409822 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO
IEA 		MGI:2177818 (PMID:9639506)
GO_REF:0000107 		RGD
Ensembl		 PMID:9639506 GO_REF:0000107 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Lmo2 LIM domain only 2 acts_upstream_of_or_within ISO MGI:95663 (PMID:10631184) RGD PMID:10631184 NCBI chr 3:90,355,234...90,377,970
Ensembl chr 3:90,365,883...90,377,953 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO
IEA 		MGI:2684189 (PMID:14500757)
GO_REF:0000107 		RGD
Ensembl		 PMID:14500757 GO_REF:0000107 NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:2155612 (PMID:11468159)
GO_REF:0000107 		RGD
Ensembl		 PMID:11468159 GO_REF:0000107 NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Rpl13a ribosomal protein L13A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 acts_upstream_of_or_within
acts_upstream_of_negative_effect 		ISO
IEA 		(PMID:14612394)
GO_REF:0000107 		RGD
Ensembl		 PMID:14612394 GO_REF:0000107 NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within
involved_in 		ISO
IEA 		MGI:1857254|MGI:1857566|MGI:2450311|MGI:2661471 (PMID:15677556), (PMID:7624372), (PMID:7830794), (PMID:9269761)
GO_REF:0000107
(PMID:19200805) 		RGD
Ensembl		 PMID:7624372 PMID:7830794 PMID:9269761 PMID:15677556 PMID:19200805 GO_REF:0000107 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA 		(PMID:12975342)
GO_REF:0000107 		RGD
Ensembl		 PMID:12975342 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO MGI:4124681 (PMID:22187428) RGD PMID:22187428 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
G Tpo thyroid peroxidase involved_in IEA
ISO 		GO_REF:0000107
(PMID:21149635) 		Ensembl
RGD		 PMID:21149635 GO_REF:0000107 NCBI chr 6:46,698,402...46,768,199
Ensembl chr 6:46,698,414...46,768,199 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO
IEA 		(PMID:14614148)
GO_REF:0000107 		RGD
Ensembl		 PMID:14614148 GO_REF:0000107 NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO
IEA 		MGI:1857254 (PMID:15677567), (PMID:18550854), (PMID:19182774)
GO_REF:0000107 		RGD
Ensembl		 PMID:15677567 PMID:18550854 PMID:19182774 GO_REF:0000107 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:3038080 (PMID:9139715)
GO_REF:0000107 		RGD
Ensembl		 PMID:9139715 GO_REF:0000107 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in ISO (PMID:32634119) RGD PMID:32634119 NCBI chr12:45,821,527...45,831,902
Ensembl chr12:45,821,555...45,831,909 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:3611933 (PMID:16287714) RGD PMID:16287714 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:2383985 (PMID:14729577) RGD PMID:14729577 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 acts_upstream_of_or_within ISO
IEA 		MGI:1857554 (PMID:9553047)
GO_REF:0000107 		RGD
Ensembl		 PMID:9553047 GO_REF:0000107 NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
primitive hemopoiesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone involved_in ISO (PMID:32634119) RGD PMID:32634119 NCBI chr12:45,821,527...45,831,902
Ensembl chr12:45,821,555...45,831,909 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within ISO MGI:1929004 (PMID:19786569) RGD PMID:19786569 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO
IEA 		MGI:1928487 (PMID:19786569)
GO_REF:0000107 		RGD
Ensembl		 PMID:19786569 GO_REF:0000107 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
G Thoc5 THO complex subunit 5 involved_in ISS
ISO 		GO_REF:0000024
(PMID:20051105) 		UniProt
RGD		 PMID:20051105 GO_REF:0000024 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
regulation of primitive erythrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:95662 (PMID:14504093)
GO_REF:0000107 		RGD
Ensembl		 PMID:14504093 GO_REF:0000107 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:95661 (PMID:14504093)
GO_REF:0000107 		RGD
Ensembl		 PMID:14504093 GO_REF:0000107 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17707228) RGD PMID:17707228 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular developmental process 4838
        cell development 3352
          hemopoiesis 1084
            embryonic hemopoiesis 32
              embryonic hemocyte differentiation + 0
              hemocyte migration 0
              primitive hemopoiesis + 11
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          embryo development 1381
            embryonic organ development 567
              embryonic hemopoiesis 32
                embryonic hemocyte differentiation + 0
                hemocyte migration 0
                primitive hemopoiesis + 11
paths to the root