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ONTOLOGY REPORT - ANNOTATIONS

Term:cerebral cortex radially oriented cell migration
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Accession:GO:0021799 term browser browse the term
Definition:The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.


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cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within IMP (PMID:20956536) MGI PMID:20956536 NCBI chr 2:76,840,246...77,006,424
Ensembl chr 2:76,840,246...77,000,980 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 involved_in IMP (PMID:20624590) DFLAT PMID:20624590 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr 9:53,525,881...53,578,807
Ensembl chr 9:53,525,882...53,581,314 		JBrowse link
G Dab1 disabled 1 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:9338784)
(PMID:24210661)
(PMID:9338785)		 RGD
GO_Central
UniProt
MGI		 PMID:9338784 PMID:9338785 PMID:18160654 PMID:24210661 GO_REF:0000096 RGD:2324689 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
G Disc1 disrupted in schizophrenia 1 involved_in IMP (PMID:20624590) DFLAT PMID:20624590 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP (PMID:20624590) DFLAT PMID:20624590 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817 		JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within IMP (PMID:19398581) MGI PMID:19398581 NCBI chr16:32,048,930...32,065,843
Ensembl chr16:32,048,930...32,065,976 		JBrowse link
G Fut10 fucosyltransferase 10 acts_upstream_of_or_within IMP (PMID:23986452) MGI PMID:23986452 NCBI chr 8:31,677,342...31,757,310
Ensembl chr 8:31,677,359...31,751,766 		JBrowse link
G Lhx6 LIM homeobox protein 6 acts_upstream_of_or_within IMP (PMID:17376969) MGI PMID:17376969 NCBI chr 2:35,971,962...35,996,004
Ensembl chr 2:35,971,965...35,995,420 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within IMP (PMID:21104742) MGI PMID:21104742 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in IMP (PMID:20624590) DFLAT PMID:20624590 NCBI chr11:68,712,260...68,743,961
Ensembl chr11:68,712,260...68,762,684 		JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366 		JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 acts_upstream_of_or_within IGI (PMID:12130536) MGI PMID:12130536 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:17409253) MGI PMID:17409253 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within IGI
IMP		 (PMID:24210661) MGI PMID:24210661 NCBI chr 9:96,352,990...96,360,728
Ensembl chr 9:96,352,990...96,360,728 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of IMP (PMID:25099998) MGI PMID:25099998 NCBI chr16:13,802,975...13,922,916
Ensembl chr16:13,804,468...13,919,364 		JBrowse link
G Dab2ip disabled 2 interacting protein involved_in IMP (PMID:23056358) UniProt PMID:23056358 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 disabled 1 acts_upstream_of_or_within IMP (PMID:15091337) MGI PMID:15091337 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IMP (PMID:18509043) UniProt PMID:18509043 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:9232833) MGI PMID:9232833 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G P2ry12 purinergic receptor P2Y, G-protein coupled 12 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 3:59,123,692...59,170,408
Ensembl chr 3:59,123,693...59,170,292 		JBrowse link
G Rtn4 reticulon 4 involved_in IMP (PMID:20093372) UniProt PMID:20093372 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within IMP (PMID:29078390) MGI PMID:29078390 NCBI chr 3:108,498,302...108,553,035
Ensembl chr 3:108,498,595...108,553,035 		JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IMP (PMID:19737524) UniProt PMID:19737524 NCBI chr 1:131,212,989...131,455,269
Ensembl chr 1:131,212,989...131,455,090 		JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IMP (PMID:18509043) UniProt PMID:18509043 NCBI chr 8:95,701,321...95,740,836
Ensembl chr 8:95,701,379...95,740,845 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IMP (PMID:11517264) MGI PMID:11517264 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010 		JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 acts_upstream_of_or_within IGI (PMID:11517264) MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:22235340) MGI PMID:22235340 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:20503375) MGI PMID:20503375 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dab2ip disabled 2 interacting protein involved_in IMP (PMID:23056358) UniProt PMID:23056358 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within IMP (PMID:19342486) MGI PMID:19342486 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:21525285) MGI PMID:21525285 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor acts_upstream_of_or_within IGI (PMID:17330141) MGI PMID:17330141 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within IMP (PMID:23097495) MGI PMID:23097495 NCBI chr 7:3,680,788...3,696,188
Ensembl chr 7:3,680,788...3,696,522 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:15385616) MGI PMID:15385616 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 acts_upstream_of_or_within IGI (PMID:17330141) MGI PMID:17330141 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Reln reelin acts_upstream_of_or_within
involved_in		 IMP
IDA		 (PMID:20847152)
(PMID:10880573)		 MGI
UniProt		 PMID:10880573 PMID:20847152 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within IMP (PMID:24210661) MGI PMID:24210661 NCBI chr11:97,253,044...97,289,368
Ensembl chr11:97,253,261...97,289,368 		JBrowse link
G Ulk4 unc-51-like kinase 4 acts_upstream_of_or_within IMP (PMID:34235142) MGI PMID:34235142 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within IMP (PMID:25099998) MGI PMID:25099998 NCBI chr16:13,802,975...13,922,916
Ensembl chr16:13,804,468...13,919,364 		JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin B1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in IMP (PMID:19874786) UniProt PMID:19874786 NCBI chr 5:139,186,313...139,235,594
Ensembl chr 5:139,186,392...139,235,595 		JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in IMP (PMID:19874786) UniProt PMID:19874786 NCBI chr15:79,608,269...79,626,757
Ensembl chr15:79,608,271...79,626,737 		JBrowse link
G Syne2 spectrin repeat containing, nuclear envelope 2 involved_in IMP (PMID:19874786) UniProt PMID:19874786 NCBI chr12:75,865,092...76,157,702
Ensembl chr12:75,864,908...76,157,700 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 disrupted in schizophrenia 1 involved_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:16299498 GO_REF:0000096 GO_REF:0000107 RGD:5509783 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IDA (PMID:22726835) MGI PMID:22726835 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr14:25,458,299...25,667,167
Ensembl chr14:25,459,609...25,667,167 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28638
    developmental process 7492
      anatomical structure development 6961
        cerebral cortex development 176
          cerebral cortex cell migration 55
            cerebral cortex radially oriented cell migration 41
              cerebral cortex radial glia-guided migration + 29
              somal translocation + 0
Path 2
Term Annotations click to browse term
  biological_process 28638
    developmental process 7492
      anatomical structure development 6961
        multicellular organism development 5538
          system development 4761
            nervous system development 2921
              central nervous system development 1234
                brain development 923
                  forebrain development 565
                    telencephalon development 393
                      pallium development 273
                        cerebral cortex development 176
                          cerebral cortex cell migration 55
                            cerebral cortex radially oriented cell migration 41
                              cerebral cortex radial glia-guided migration + 29
                              somal translocation + 0
paths to the root