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ONTOLOGY REPORT - ANNOTATIONS


Term:cerebral cortex cell migration
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Accession:GO:0021795 term browser browse the term
Definition:The orderly movement of cells from one site to another in the cerebral cortex.


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cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cr1 C-X3-C motif chemokine receptor 1 acts_upstream_of_or_within ISO MGI:2670351 (MGI:3639805|PMID:16732273) RGD PMID:16732273 MGI:3639805 NCBI chr 8:119,785,726...119,799,431 JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3050637 (MGI:3050180|PMID:15249135) RGD PMID:15249135 MGI:3050180 NCBI chr 5:118,392,953...119,513,625 JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:51,007,835...51,081,191 JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) RGD PMID:22926142 NCBI chr 9:23,375,815...23,414,283 JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:74263 NCBI chr14:91,176,931...91,349,722 JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056 JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607347|PMID:25078650)
UniProt
RGD
PMID:25078650 GO_REF:0000024 MGI:5607347 NCBI chr 5:151,295,269...151,312,853 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3689135|PMID:16920270) RGD PMID:16920270 MGI:3689135 NCBI chr 4:167,266,581...167,400,155 JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3834781|PMID:18786357)
Ensembl
RGD
PMID:18786357 GO_REF:0000107 MGI:3834781 NCBI chr 6:73,996,601...74,001,483 JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (MGI:2670243|PMID:12897163) RGD PMID:12897163 MGI:2670243 NCBI chr14:97,602,829...97,621,233 JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454 (MGI:1096198|PMID:9288097), (MGI:1352371|PMID:10653000) RGD PMID:9288097 PMID:10653000 MGI:1096198 MGI:1352371 NCBI chr 4:157,270,671...157,296,432 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (MGI:3587130|PMID:16079160) RGD PMID:16079160 MGI:3587130 NCBI chr 6:103,323,014...103,375,088 JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (MGI:5316314|PMID:22405202) RGD PMID:22405202 MGI:5316314 NCBI chr 8:108,991,926...109,025,746 JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5463669|PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:18,915,290...19,086,282 JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1856801 (MGI:3042322|PMID:15091337) RGD PMID:15091337 MGI:3042322 NCBI chr 5:118,392,953...119,513,625 JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3796260|PMID:18509043)
UniProt
RGD
PMID:18509043 GO_REF:0000024 MGI:3796260 NCBI chr19:10,003,963...10,041,122 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (MGI:1097510|PMID:9232833) RGD PMID:9232833 MGI:1097510 NCBI chr17:49,438,567...49,709,712 JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4461842|PMID:20093372)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20093372 GO_REF:0000024 GO_REF:0000107 MGI:4461842 NCBI chr14:103,450,074...103,497,687 JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (MGI:4868565|PMID:20956536) RGD PMID:20956536 MGI:4868565 NCBI chr 3:61,948,614...62,109,968 JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:65,484,266...65,485,467 JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:54,012,963...54,066,751 JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within IMP
ISO
MGI:1337096|MGI:1861918 (MGI:1098179|PMID:9338785), (MGI:5545793|PMID:24210661) RGD PMID:9338785 PMID:24210661, PMID:18160654 MGI:1098179 MGI:5545793, RGD:2324689 NCBI chr 5:118,392,953...119,513,625 JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:53,014,201...53,223,617 JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4821185|PMID:20624590)
Ensembl
RGD
PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:51,007,835...51,081,191 JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 MGI:3849342 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532797|PMID:23986452)
Ensembl
RGD
PMID:23986452 GO_REF:0000107 MGI:5532797 NCBI chr16:60,868,761...60,958,762 JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:19,432,439...19,456,268 JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4878863 (MGI:4866945|PMID:21104742)
Ensembl
RGD
PMID:21104742 GO_REF:0000107 MGI:4866945 NCBI chr20:7,900,327...7,963,471 JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:53,505,628...53,582,025 JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:102564 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 5:36,077,930...36,083,838 JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101895 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 9:44,945,872...44,948,986 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:11,037,028...11,057,251 JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:97,038,845...97,048,080 JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:82,352,159...82,388,829 JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107 MGI:3709215 NCBI chr  X:58,016,233...58,028,149 JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 MGI:3849342 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:19,432,439...19,456,268 JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1856398 (MGI:3701699|PMID:16901480)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16901480 GO_REF:0000024 GO_REF:0000107 MGI:3701699 NCBI chr 4:12,736,177...13,162,956 JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO
IEA
(PMID:15207848)
GO_REF:0000107
RGD
Ensembl
PMID:15207848 GO_REF:0000107 NCBI chr11:10,580,863...11,621,672 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:15207848)
GO_REF:0000107
RGD
Ensembl
PMID:15207848 GO_REF:0000107 NCBI chr14:62,616,337...62,955,934 JBrowse link
cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2ry12 purinergic receptor P2Y12 involved_in IMP PMID:18183622
PMID:17299767
ARUK-UCL PMID:18183622, PMID:17299767 RGD:13673786, RGD:13673751 NCBI chr 2:143,481,468...143,523,340 JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366584|PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024 MGI:4366584 NCBI chr13:42,745,956...42,967,083 JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3796260|PMID:18509043)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18509043 GO_REF:0000024 GO_REF:0000107 MGI:3796260 NCBI chr19:10,003,963...10,041,122 JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 4:10,754,682...10,760,110 JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:65,484,266...65,485,467 JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:76,416,251...76,417,719 JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:3701617 (MGI:4454697|PMID:20503375)
Ensembl
RGD
PMID:20503375 GO_REF:0000107 MGI:4454697 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5463669|PMID:23056358)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:18,915,290...19,086,282 JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387757 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chr  X:107,430,767...107,573,612 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2176173|MGI:3798847 (MGI:4949945|PMID:21525285) RGD PMID:21525285 MGI:4949945 NCBI chr17:49,438,567...49,709,712 JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr 5:122,563,468...122,635,434 JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5509338 (MGI:5507927|PMID:23097495) RGD PMID:23097495 MGI:5507927 NCBI chr 1:65,525,206...65,539,538 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (MGI:3629819|PMID:15385616) RGD PMID:15385616 MGI:3629819 NCBI chr20:46,050,134...46,070,569 JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr10:59,533,042...59,591,808 JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856398 (MGI:5319303|PMID:20847152)
Ensembl
RGD
PMID:20847152 GO_REF:0000107 MGI:5319303 NCBI chr 4:12,736,177...13,162,956 JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO MGI:5545789 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:82,352,159...82,388,829 JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,492,445...66,546,731 JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within ISO (MGI:5578117|PMID:25099998) RGD PMID:25099998 MGI:5578117 NCBI chr10:1,779,834...1,946,586 JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23472759) RGD PMID:23472759 NCBI chr 6:47,835,492...47,902,585 JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr12:15,396,378...15,441,277 JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 7:111,275,374...111,292,565 JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 6:94,537,088...94,848,085 JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:53,014,201...53,223,617 JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:5440366 NCBI chr 6:66,674,797...66,677,611 JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,027,083...1,232,616 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      anatomical structure development 6195
        cerebral cortex development 152
          cerebral cortex cell migration 53
            cerebral cortex radially oriented cell migration + 38
            cerebral cortex tangential migration + 7
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6768
      anatomical structure development 6195
        multicellular organism development 5632
          system development 5300
            nervous system development 2731
              central nervous system development 1270
                brain development 976
                  forebrain development 510
                    telencephalon development 342
                      pallium development 238
                        cerebral cortex development 152
                          cerebral cortex cell migration 53
                            cerebral cortex radially oriented cell migration + 38
                            cerebral cortex tangential migration + 7
paths to the root