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ONTOLOGY REPORT - ANNOTATIONS


Term:pallium development
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Accession:GO:0021543 term browser browse the term
Definition:The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon.


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pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (MGI:3624179|PMID:16613831) RGD PMID:16613831 MGI:3624179 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:1340205|PMID:10409502) RGD PMID:10409502 MGI:1340205 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856158 (MGI:1928687|PMID:11124115) RGD PMID:11124115 MGI:1928687 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) RGD PMID:18778775 MGI:3821675 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5463669|PMID:23056358)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:1856801 (MGI:3042322|PMID:15091337) RGD PMID:15091337 MGI:3042322 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cr1 C-X3-C motif chemokine receptor 1 acts_upstream_of_or_within ISO MGI:2670351 (MGI:3639805|PMID:16732273) RGD PMID:16732273 MGI:3639805 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3050637 (MGI:3050180|PMID:15249135) RGD PMID:15249135 MGI:3050180 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:55,091,232...55,164,636
Ensembl chr 8:55,091,235...55,162,421
JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) RGD PMID:22926142 NCBI chr 9:27,068,505...27,107,713
Ensembl chr 9:27,068,443...27,107,709
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:74263 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607347|PMID:25078650)
UniProt
RGD
PMID:25078650 GO_REF:0000024 MGI:5607347 NCBI chr 5:157,501,202...157,518,870
Ensembl chr 5:157,503,040...157,518,631
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3689135|PMID:16920270) RGD PMID:16920270 MGI:3689135 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3834781|PMID:18786357)
Ensembl
RGD
PMID:18786357 GO_REF:0000107 MGI:3834781 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (MGI:2670243|PMID:12897163) RGD PMID:12897163 MGI:2670243 NCBI chr14:108,394,299...108,411,994
Ensembl chr14:108,394,303...108,412,823
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454 (MGI:1096198|PMID:9288097), (MGI:1352371|PMID:10653000) RGD PMID:9288097 PMID:10653000 MGI:1096198 MGI:1352371 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (MGI:3587130|PMID:16079160) RGD PMID:16079160 MGI:3587130 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (MGI:5316314|PMID:22405202) RGD PMID:22405202 MGI:5316314 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:5607284|MGI:95387 (MGI:5605648|PMID:25100583) RGD PMID:25100583 MGI:5605648 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Ahsg alpha-2-HS-glycoprotein IEP RGD PMID:2423927 RGD:1626077 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3775335|PMID:17678855) RGD PMID:17678855 MGI:3775335 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO MGI:5573152 (MGI:5545702|PMID:24220505) RGD PMID:24220505 MGI:5545702 NCBI chr13:56,546,021...56,591,793
Ensembl chr13:56,546,021...56,591,793
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (MGI:3630371|PMID:16625205) RGD PMID:16625205 MGI:3630371 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:78,862,013...78,882,061
Ensembl chr 9:78,862,013...78,882,060
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (MGI:3611623|PMID:16325379) RGD PMID:16325379 MGI:3611623 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 IEP RGD PMID:19362129 RGD:11576282 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:9813151 RGD:2315711 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
MGI:1857429 (MGI:3054131|PMID:15342910)
GO_REF:0000107
RGD
Ensembl
PMID:15342910, PMID:9813151 GO_REF:0000107 MGI:3054131, RGD:2315711 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:9813151 RGD:2315711 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2a1 BCL2-related protein A1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 8:96,551,424...96,559,527
Ensembl chr 8:96,551,245...96,559,483
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:16765336 RGD:11561980 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Btbd3 BTB domain containing 3 involved_in IBA
ISO
PMID:21873635
(MGI:5527009|PMID:24179155)
RGD PMID:24179155, PMID:21873635 MGI:5527009, RGD:13792537 NCBI chr 3:131,330,338...131,360,554
Ensembl chr 3:131,351,587...131,357,929
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IEP RGD PMID:10749215 RGD:11576295 NCBI chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in ISO (MGI:5305566|PMID:22056358) RGD PMID:22056358 MGI:5305566 NCBI chr 6:132,113,806...132,183,434 JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (MGI:5605648|PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 MGI:5605648 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:1277606|PMID:9698328) RGD PMID:9698328 MGI:1277606 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3625667|PMID:16648472)
Ensembl
RGD
PMID:16648472 GO_REF:0000107 MGI:3625667 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 acts_upstream_of_or_within ISO (MGI:6405956|PMID:32245946) RGD PMID:32245946 MGI:6405956 NCBI chr 3:79,768,900...79,844,548
Ensembl chr 3:79,823,945...79,842,082
JBrowse link
G Cep120 centrosomal protein 120 acts_upstream_of_or_within ISO (MGI:3762422|PMID:17920017) RGD PMID:17920017 MGI:3762422 NCBI chr18:48,658,495...48,720,570
Ensembl chr18:48,658,495...48,720,472
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:18987363) RGD PMID:18179893 PMID:18987363 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISS
ISO
GO_REF:0000024
(MGI:5288127|PMID:21768377)
UniProt
RGD
PMID:21768377 GO_REF:0000024 MGI:5288127 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IEP RGD PMID:12801913 RGD:634609 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:7735332 RGD:11565823 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:7735332 RGD:11565823 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Dab1 DAB adaptor protein 1 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (MGI:3823132|PMID:18997113) RGD PMID:18997113 MGI:3823132 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dmd dystrophin IEP RGD PMID:1454857 RGD:12880362 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:1928281|MGI:88355|MGI:95388 (MGI:3606726|PMID:12764040), (MGI:3664674|PMID:16892058), (MGI:5605648|PMID:25100583) RGD PMID:12764040 PMID:16892058 PMID:25100583 MGI:3606726 MGI:3664674 MGI:5605648 NCBI chr 4:116,967,646...116,984,136
Ensembl chr 4:116,968,000...116,985,551
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95387 (MGI:3606726|PMID:12764040) RGD PMID:12764040 MGI:3606726 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (MGI:4821246|PMID:19506035) RGD PMID:19506035 MGI:4821246 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Flna filamin A IEP RGD PMID:22076441 RGD:11564351 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:5440366 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:18987363) RGD PMID:18987363 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:31,780,477...31,805,728
Ensembl chr11:31,780,487...31,805,728
JBrowse link
G Gng12 G protein subunit gamma 12 IEP RGD PMID:9003074 RGD:2314446 NCBI chr 4:97,634,925...97,763,478
Ensembl chr 4:97,657,671...97,760,102
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:1928281|MGI:2655232|MGI:2655237 (MGI:1888650|PMID:10963597), (MGI:2654367|PMID:12657691) RGD PMID:10963597 PMID:12657691 MGI:1888650 MGI:2654367 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19409459 RGD:2325985 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19409459 RGD:2325985 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G H2ax H2A.X variant histone IEP RGD PMID:3622934 RGD:8693731 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2677899 (MGI:2676530|PMID:12972594)
Ensembl
RGD
PMID:12972594 GO_REF:0000107 MGI:2676530 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP
IDA
RGD PMID:22102872, PMID:18054780 RGD:10002783, RGD:10041004 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Kdm1a lysine demethylase 1A IEP RGD PMID:20164337 RGD:9588288 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4399044 (MGI:4397621|PMID:19820705)
(MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)
Ensembl
RGD
PMID:19820705 PMID:26371318 PMID:28053041 GO_REF:0000107 MGI:4397621 MGI:5699500 MGI:5817507 NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446
JBrowse link
G Lrp1 LDL receptor related protein 1 IEP RGD PMID:8930375 RGD:10046019 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2156191 (MGI:3689135|PMID:16920270)
RGD PMID:16920270, PMID:21873635 MGI:3689135, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Lrp8 LDL receptor related protein 8 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (MGI:5306866|PMID:21947081) RGD PMID:21947081 MGI:5306866 NCBI chr16:75,904,087...76,110,624
Ensembl chr16:75,904,006...76,110,553
JBrowse link
G Mdk midkine acts_upstream_of_or_within ISO (PMID:10096022) RGD PMID:10096022 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:12551846 RGD:5688241 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:21529752)
MGI:109520 (MGI:3805426|PMID:18469343)
GO_REF:0000024
RGD
UniProt
PMID:18469343 PMID:21529752 GO_REF:0000024 MGI:3805426 NCBI chr10:860,513...904,624
Ensembl chr10:860,521...896,938
JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr14:85,181,572...85,191,557
Ensembl chr14:85,181,572...85,191,557
JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:44,799,378...44,803,251
Ensembl chr15:44,799,334...44,804,574
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:44,855,307...44,860,604
Ensembl chr15:44,855,310...44,860,604
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:2176055|MGI:2176057 (MGI:1932841|PMID:11297510)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:11297510 GO_REF:0000024 GO_REF:0000107 MGI:1932841 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:9067840) RGD PMID:9067840 NCBI chr 4:79,557,856...79,565,059
Ensembl chr 4:79,557,854...79,565,097
Ensembl chr 4:79,557,854...79,565,097
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (MGI:2151063|PMID:11997145), (MGI:3527227|PMID:12527005), (MGI:3582135|PMID:16000615), (MGI:3588942|PMID:15950290) RGD PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615 MGI:2151063 MGI:3527227 MGI:3582135 MGI:3588942 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IEP RGD PMID:21056632 RGD:124713572 NCBI chr 3:43,111,258...43,128,391
Ensembl chr 3:43,111,240...43,119,159
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (MGI:6369928|PMID:31462248) RGD PMID:31462248 MGI:6369928 NCBI chr12:24,341,940...24,346,900
Ensembl chr12:24,341,928...24,346,918
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3776308|PMID:15372074)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15372074 GO_REF:0000024 GO_REF:0000107 MGI:3776308 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9063735)
MGI:1914453|MGI:2387783 (MGI:1935015|PMID:11344260), (MGI:3805426|PMID:18469343)
RGD PMID:9063735 PMID:11344260 PMID:18469343 MGI:1935015 MGI:3805426 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK family member involved_in ISS
ISO
GO_REF:0000024
(MGI:4454735|PMID:20399730)
UniProt
RGD
PMID:20399730 GO_REF:0000024 MGI:4454735 NCBI chr 6:101,923,675...102,029,705
Ensembl chr 6:101,923,785...102,028,592
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (MGI:5476374|PMID:23349049) RGD PMID:23349049 MGI:5476374 NCBI chr 5:60,007,587...60,191,973
Ensembl chr 5:60,007,587...60,191,941
JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6316857|PMID:30256902)
UniProt
RGD
PMID:30256902 GO_REF:0000024 MGI:6316857 NCBI chr17:23,245,423...23,761,207 JBrowse link
G Plcb1 phospholipase C beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3628680|PMID:11224545)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:11224545 GO_REF:0000024 GO_REF:0000107 MGI:3628680 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:9275233 RGD:625590 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (MGI:3587130|PMID:16079160) RGD PMID:16079160 MGI:3587130 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (MGI:3614607|PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 MGI:3614607 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Reln reelin acts_upstream_of_or_within IEP
ISO
MGI:1856398 (MGI:5086060|PMID:21491433) RGD PMID:21491433, PMID:10436054 MGI:5086060, RGD:634730 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Slc2a1 solute carrier family 2 member 1 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Slc2a3 solute carrier family 2 member 3 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 4:155,549,991...155,626,018
Ensembl chr 4:155,408,233...155,631,856
Ensembl chr 4:155,408,233...155,631,856
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:21718781 RGD:9999217 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256 (MGI:5510940|PMID:23680462)
Ensembl
RGD
PMID:23680462 GO_REF:0000107 MGI:5510940 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2181440|MGI:3052123 (MGI:3051708|PMID:15240551) RGD PMID:15240551 MGI:3051708 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3762422|PMID:17920017)
RGD PMID:17920017, PMID:21873635 MGI:3762422, RGD:13792537 NCBI chr16:71,596,970...71,681,126
Ensembl chr16:71,629,525...71,681,126
JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3762422|PMID:17920017)
RGD PMID:17920017, PMID:21873635 MGI:3762422, RGD:13792537 NCBI chr 1:201,140,264...201,329,612
Ensembl chr 1:201,055,644...201,329,622
JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3762422|PMID:17920017)
RGD PMID:17920017, PMID:21873635 MGI:3762422, RGD:13792537 NCBI chr14:82,336,283...82,350,069
Ensembl chr14:82,336,324...82,347,679
JBrowse link
G Tbr1 T-box brain transcription factor 1 IEP RGD PMID:10749215 RGD:11576295 NCBI chr 3:47,677,720...47,685,902
Ensembl chr 3:47,677,720...47,685,902
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:2176695 (MGI:4397655|PMID:19749747) RGD PMID:19749747 MGI:4397655 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21295554 RGD:5128671 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 involved_in ISO (PMID:20004763) RGD PMID:20004763 NCBI chr 7:113,986,363...114,309,090
Ensembl chr 7:113,681,793...114,305,896
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO MGI:2176055|MGI:2656240 (MGI:3712408|PMID:17522300) RGD PMID:17522300 MGI:3712408 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:20368265 RGD:2324624 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO (PMID:20729831) RGD PMID:20729831 NCBI chr 1:90,995,545...91,034,592
Ensembl chr 1:88,694,824...88,734,223
JBrowse link
G Xab2 XPA binding protein 2 IEP RGD PMID:12801913 RGD:634609 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon acts_upstream_of_or_within ISO MGI:2667341 (MGI:2665158|PMID:12796778) RGD PMID:12796778 MGI:2665158 NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (MGI:3851676|PMID:19409883) RGD PMID:19409883 MGI:3851676 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236
JBrowse link
cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3796260|PMID:18509043)
UniProt
RGD
PMID:18509043 GO_REF:0000024 MGI:3796260 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (MGI:1097510|PMID:9232833) RGD PMID:9232833 MGI:1097510 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4461842|PMID:20093372)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20093372 GO_REF:0000024 GO_REF:0000107 MGI:4461842 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (MGI:4868565|PMID:20956536) RGD PMID:20956536 MGI:4868565 NCBI chr 3:63,865,240...64,024,208
Ensembl chr 3:63,863,951...64,024,205
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:58,199,992...58,255,149
Ensembl chr 8:58,202,821...58,253,688
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within IMP
ISO
MGI:1337096|MGI:1861918 (MGI:1098179|PMID:9338785), (MGI:5545793|PMID:24210661) RGD PMID:9338785 PMID:24210661, PMID:18160654 MGI:1098179 MGI:5545793, RGD:2324689 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4821185|PMID:20624590)
Ensembl
RGD
PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:55,091,232...55,164,636
Ensembl chr 8:55,091,235...55,162,421
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 MGI:3849342 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532797|PMID:23986452)
Ensembl
RGD
PMID:23986452 GO_REF:0000107 MGI:5532797 NCBI chr16:64,623,246...64,716,248
Ensembl chr16:64,631,264...64,716,224
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4878863 (MGI:4866945|PMID:21104742)
Ensembl
RGD
PMID:21104742 GO_REF:0000107 MGI:4866945 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:102564 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101895 (MGI:2183078|PMID:12130536)
Ensembl
RGD
PMID:12130536 GO_REF:0000107 MGI:2183078 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253) RGD PMID:17409253 MGI:3709518 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr 8:104,326,719...104,336,098
Ensembl chr 8:104,326,719...104,335,729
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5566553|PMID:24531968)
Ensembl
RGD
PMID:24531968 GO_REF:0000107 MGI:5566553 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (MGI:5486528|PMID:23431145) RGD PMID:23431145 MGI:5486528 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624
JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO MGI:5527461 (MGI:5524255|PMID:23056351), (MGI:5605467|PMID:22923088) RGD PMID:22923088 PMID:23056351 MGI:5524255 MGI:5605467 NCBI chr 5:129,754,295...129,760,045
Ensembl chr 5:129,756,149...129,758,986
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:95388 (MGI:3043493|PMID:15147765) RGD PMID:15147765 MGI:3043493 NCBI chr 4:116,967,646...116,984,136
Ensembl chr 4:116,968,000...116,985,551
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387 (MGI:3043493|PMID:15147765), (MGI:3606726|PMID:12764040) RGD PMID:12764040 PMID:15147765 MGI:3043493 MGI:3606726 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:2176173|MGI:3802572 (MGI:5486528|PMID:23431145) RGD PMID:23431145 MGI:5486528 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO MGI:3521756 (MGI:3763674|PMID:17828260) RGD PMID:17828260 MGI:3763674 NCBI chr 2:5,569,954...5,579,894
Ensembl chr 2:5,569,935...5,579,894
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155 (MGI:3606726|PMID:12764040), (MGI:5486528|PMID:23431145)
Ensembl
RGD
PMID:12764040 PMID:23431145 GO_REF:0000107 MGI:3606726 MGI:5486528 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Tra2b transformer 2 beta homolog acts_upstream_of_or_within ISO MGI:2176173|MGI:4450919 (MGI:5584349|PMID:24586484) RGD PMID:24586484 MGI:5584349 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083
JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679972 (MGI:3709215|PMID:17460091)
Ensembl
RGD
PMID:17460091 GO_REF:0000107 MGI:3709215 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849742 (MGI:3849342|PMID:19398581)
Ensembl
RGD
PMID:19398581 GO_REF:0000107 MGI:3849342 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (MGI:3702257|PMID:17376969) RGD PMID:17376969 MGI:3702257 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1856398 (MGI:3701699|PMID:16901480)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16901480 GO_REF:0000024 GO_REF:0000107 MGI:3701699 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO
IEA
(PMID:15207848)
GO_REF:0000107
RGD
Ensembl
PMID:15207848 GO_REF:0000107 NCBI chr11:9,079,291...10,146,302
Ensembl chr11:9,642,365...10,143,317
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:15207848)
GO_REF:0000107
RGD
Ensembl
PMID:15207848 GO_REF:0000107 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2ry12 purinergic receptor P2Y12 involved_in IMP PMID:18183622
PMID:17299767
ARUK-UCL PMID:18183622, PMID:17299767 RGD:13673786, RGD:13673751 NCBI chr 2:149,440,807...149,482,592
Ensembl chr 2:149,441,598...149,444,548
JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within ISO MGI:4453011 (MGI:5516166|PMID:23720746) RGD PMID:23720746 MGI:5516166 NCBI chr20:3,351,269...3,364,565
Ensembl chr20:3,351,303...3,364,565
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (MGI:4418391|PMID:20020054) RGD PMID:20020054 MGI:4418391 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:33450391 RGD:126781687 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181426|MGI:3707260 (MGI:3703826|PMID:17360497)
Ensembl
RGD
PMID:17360497 GO_REF:0000107 MGI:3703826 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (MGI:2153372|PMID:10729342) RGD PMID:10729342 MGI:2153372 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2179048|MGI:2386464 (MGI:3794243|PMID:18297065) RGD PMID:18297065 MGI:3794243 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1933764 (MGI:1351293|PMID:10631168)
Ensembl
RGD
PMID:10631168 GO_REF:0000107 MGI:1351293 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176
JBrowse link
G Mdk midkine acts_upstream_of_or_within ISO (PMID:10096022) RGD PMID:10096022 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mef2c myocyte enhancer factor 2C IEP RGD PMID:18949272 RGD:5131610 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:106593 (MGI:1858353|PMID:10804213)
(MGI:1352314|PMID:10639171), (MGI:2159022|PMID:10398678)
UniProt
RGD
PMID:10398678 PMID:10639171 PMID:10804213 GO_REF:0000024 MGI:1352314 MGI:1858353 MGI:2159022 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod6 neuronal differentiation 6 acts_upstream_of_or_within ISO MGI:1339708 (MGI:1858353|PMID:10804213) RGD PMID:10804213 MGI:1858353 NCBI chr 4:85,911,861...85,915,107
Ensembl chr 4:85,911,861...85,915,099
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2181426 (MGI:3527227|PMID:12527005), (MGI:3763461|PMID:17953618) RGD PMID:12527005 PMID:17953618 MGI:3527227 MGI:3763461 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) RGD PMID:17706614 MGI:3759727 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Reln reelin IMP RGD PMID:15459104 RGD:2317799 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (MGI:4939559|PMID:21159798) RGD PMID:21159798 MGI:4939559 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:2179048 (MGI:3794243|PMID:18297065)
Ensembl
RGD
PMID:18297065 GO_REF:0000107 MGI:3794243 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (MGI:5825380|PMID:28096412) RGD PMID:28096412 MGI:5825380 NCBI chr 8:111,968,568...112,265,623
Ensembl chr 8:111,970,288...111,984,572
JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366584|PMID:19737524)
UniProt
RGD
PMID:19737524 GO_REF:0000024 MGI:4366584 NCBI chr13:48,065,280...48,286,888
Ensembl chr13:48,068,158...48,286,720
JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:44,272,859...44,342,501
Ensembl chr 3:44,270,653...44,342,355
JBrowse link
G Akap5 A-kinase anchoring protein 5 IEP RGD PMID:19535604 RGD:2313144 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:69,806,095...69,827,125
Ensembl chr17:69,806,065...69,827,112
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (MGI:5697626|PMID:17487225) RGD PMID:17487225 MGI:5697626 NCBI chr 6:22,696,415...23,203,791
Ensembl chr 6:22,696,397...23,203,775
JBrowse link
G Anxa3 annexin A3 IEP RGD PMID:18493952 RGD:2302825 NCBI chr14:14,371,921...14,426,503
Ensembl chr14:14,364,008...14,426,437
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IEP RGD PMID:16200642 RGD:6906893 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (MGI:3767384|PMID:18032602), (MGI:5604561|PMID:24695551) RGD PMID:18032602 PMID:24695551 MGI:3767384 MGI:5604561 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bcan brevican involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388924 (MGI:2388543|PMID:12370289)
Ensembl
RGD
PMID:12370289 GO_REF:0000107 MGI:2388543 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18459132 RGD:2293317 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527
JBrowse link
G Cfl1 cofilin 1 IEP RGD PMID:27073215 RGD:11568695 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:3822695|PMID:19074029) RGD PMID:19074029 MGI:3822695 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3777252 (MGI:3810044|PMID:18477607) RGD PMID:18477607 MGI:3810044 NCBI chr 5:123,154,360...124,279,170
Ensembl chr 5:123,905,166...124,280,115
JBrowse link
G Dclk2 doublecortin-like kinase 2 acts_upstream_of_or_within ISO MGI:1277171 (MGI:3844387|PMID:19342486) RGD PMID:19342486 MGI:3844387 NCBI chr 2:186,116,624...186,245,937
Ensembl chr 2:186,116,624...186,245,771
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1918012|MGI:2387757 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94902 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94901 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:2181426|MGI:3707260 (MGI:3703826|PMID:17360497) RGD PMID:17360497 MGI:3703826 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:109,044,830...109,051,254
Ensembl chr 6:109,043,880...109,051,253
JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma IEP RGD PMID:12850562 RGD:11041879 NCBI chr 5:135,882,946...135,949,276
Ensembl chr 5:135,882,967...135,949,818
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:26,546,917...26,552,474
Ensembl chr 6:26,546,924...26,552,430
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IEP RGD PMID:12850562 RGD:11041879 NCBI chr11:84,080,273...84,090,259
Ensembl chr11:84,080,273...84,090,259
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Epha5 EPH receptor A5 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:2384261|PMID:12124402)
PMID:21873635
UniProt
RGD
PMID:12124402, PMID:21873635 GO_REF:0000024 MGI:2384261, RGD:13792537 NCBI chr14:25,589,312...25,958,258
Ensembl chr14:25,589,762...25,958,227
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 IEP RGD PMID:14992819 RGD:13208825 NCBI chr 8:39,305,128...39,350,270
Ensembl chr 8:39,305,128...39,350,270
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431268|PMID:22726441)
UniProt
RGD
PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2684610|MGI:3798847 (MGI:5523775|PMID:22235033) RGD PMID:22235033 MGI:5523775 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19535712 RGD:2325978 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19535712 RGD:2325978 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:19581563)
GO_REF:0000107
RGD
Ensembl
PMID:19581563 GO_REF:0000107 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within ISO MGI:1097691 (MGI:3844761|PMID:19380719) RGD PMID:19380719 MGI:3844761 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:108086 (MGI:3844761|PMID:19380719) RGD PMID:19380719 MGI:3844761 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:1,579,319...1,610,745
Ensembl chr17:1,579,319...1,610,745
JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 IEP RGD PMID:21047951 RGD:4145527 NCBI chr13:88,288,116...88,308,019
Ensembl chr13:88,288,046...88,307,988
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21047951, PMID:21873635 RGD:4145527, RGD:13792537
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21047951, PMID:21873635 RGD:4145527, RGD:13792537 NCBI chr 2:200,712,895...200,722,429
Ensembl chr 2:202,341,422...202,350,929
JBrowse link
G Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,756,557...200,762,492
Ensembl chr 2:200,585,748...200,762,492
JBrowse link
G Hsd3b5 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:200,615,910...200,633,317
Ensembl chr 2:200,584,986...200,692,335
JBrowse link
G Htr5a 5-hydroxytryptamine receptor 5A IEP RGD PMID:16572590 RGD:2316993 NCBI chr 4:199,916...209,599
Ensembl chr 4:199,916...209,599
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO MGI:3505549 (MGI:3487176|PMID:15469968) RGD PMID:15469968 MGI:3487176 NCBI chr17:16,692,557...16,695,126
Ensembl chr17:16,692,557...16,695,126
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Insr insulin receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5613474|PMID:17315199) RGD PMID:17315199 MGI:5613474 NCBI chr 4:159,190,781...159,192,526
Ensembl chr 4:159,190,804...159,192,526
JBrowse link
G Kdm6b lysine demethylase 6B IDA RGD PMID:23932971 RGD:9587811 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:53,350,073...53,421,992
Ensembl chr13:53,351,717...53,420,111
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G Kif5b kinesin family member 5B IEP RGD PMID:9349526 RGD:12792964 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in ISO (MGI:5705162|PMID:26575286) RGD PMID:26575286 MGI:5705162 NCBI chr 8:35,692,525...36,254,755
Ensembl chr 8:36,125,999...36,254,753
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1933764 (MGI:1351293|PMID:10631168) RGD PMID:10631168 MGI:1351293 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (MGI:1337234|PMID:10325223) RGD PMID:10325223 MGI:1337234 NCBI chr12:41,663,000...41,671,437
Ensembl chr12:41,663,000...41,671,437
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (MGI:49987|PMID:1638738) RGD PMID:1638738 MGI:49987 NCBI chr13:85,916,753...86,061,534
Ensembl chr13:85,918,252...86,061,176
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IEP RGD PMID:1521325 RGD:2316795 NCBI chr 1:48,076,761...48,108,218
Ensembl chr 1:48,077,033...48,108,216
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A involved_in ISO (MGI:5571501|PMID:24828044) RGD PMID:24828044 MGI:5571501 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (MGI:3767384|PMID:18032602) RGD PMID:18032602 MGI:3767384 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:22085911 RGD:5688137 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr14:85,181,572...85,191,557
Ensembl chr14:85,181,572...85,191,557
JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:44,799,378...44,803,251
Ensembl chr15:44,799,334...44,804,574
JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:44,855,307...44,860,604
Ensembl chr15:44,855,310...44,860,604
JBrowse link
G Nf2 neurofibromin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5502251|PMID:23863479)
Ensembl
RGD
PMID:23863479 GO_REF:0000107 MGI:5502251 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (MGI:1928567|PMID:11163262)
Ensembl
RGD
PMID:11163262 GO_REF:0000107 MGI:1928567 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nog noggin IEP RGD PMID:15171992 RGD:10416525 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:3056852|PMID:15456880) RGD PMID:15456880 MGI:3056852 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Ogdh oxoglutarate dehydrogenase acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr14:86,414,924...86,481,903
Ensembl chr14:86,414,949...86,613,327
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044|MGI:2384054 (MGI:2183347|PMID:10729324), (MGI:3769085|PMID:17330141) RGD PMID:10729324 PMID:17330141 MGI:2183347 MGI:3769085 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:45,026,948...45,031,148
Ensembl chr12:45,026,886...45,031,145
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:20819118 RGD:8693633 NCBI chr13:26,145,989...26,394,505
Ensembl chr13:26,172,243...26,394,505
JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IEP RGD PMID:20819118 RGD:8693633 NCBI chr19:41,731,845...41,798,451
Ensembl chr19:41,731,646...41,798,383
JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:21123436 RGD:10043818 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158734 (MGI:3614607|PMID:15842738)
Ensembl
RGD
PMID:15842738 GO_REF:0000107 MGI:3614607 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:10906718 RGD:9589828 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Ran RAN, member RAS oncogene family IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:18619947 RGD:8693612 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Reln reelin involved_in IEA
ISO
GO_REF:0000107
(MGI:3765383|PMID:17229826)
Ensembl
RGD
PMID:17229826 GO_REF:0000107 MGI:3765383 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Sct secretin involved_in ISS
ISO
GO_REF:0000024
(MGI:3814626|PMID:18534766)
UniProt
RGD
PMID:18534766 GO_REF:0000024 MGI:3814626 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Sema6b semaphorin 6B involved_in ISS
ISO
GO_REF:0000024
(MGI:4454564|PMID:20484647)
UniProt
RGD
PMID:20484647 GO_REF:0000024 MGI:4454564 NCBI chr 9:10,934,273...10,951,252
Ensembl chr 9:10,941,613...10,951,252
JBrowse link
G Slc17a6 solute carrier family 17 member 6 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 1:106,980,463...107,038,717
Ensembl chr 1:106,998,623...107,038,704
JBrowse link
G Slc32a1 solute carrier family 32 member 1 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 3:155,102,980...155,107,815
Ensembl chr 3:155,103,150...155,107,817
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 6:25,279,635...25,315,501
Ensembl chr 6:25,279,626...25,315,511
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (MGI:3578447|PMID:15837932) RGD PMID:15837932 MGI:3578447 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:24074826 RGD:9684936 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (MGI:1354064|PMID:10716451) RGD PMID:10716451 MGI:1354064 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO MGI:2176055|MGI:2656240 (MGI:3712408|PMID:17522300) RGD PMID:17522300 MGI:3712408 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6478862|PMID:31983064)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:31983064 GO_REF:0000024 GO_REF:0000107 MGI:6478862 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (MGI:5495570|PMID:23499007) RGD PMID:23499007 MGI:5495570 NCBI chr14:23,507,628...23,571,446
Ensembl chr14:23,507,628...23,571,446
JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII acts_upstream_of_or_within ISO (PMID:16901643) RGD PMID:16901643 NCBI chr10:38,779,132...38,782,489
Ensembl chr10:38,779,132...38,782,419
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (MGI:5532214|PMID:23861879) RGD PMID:23861879 MGI:5532214 NCBI chr  X:10,510,033...10,660,555
Ensembl chr  X:10,510,033...10,630,297
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:1351292|PMID:10631167) RGD PMID:10631167 MGI:1351292 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (MGI:4359093|PMID:19633665) RGD PMID:19633665 MGI:4359093 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEP RGD PMID:23933240 RGD:9684963 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon acts_upstream_of_or_within ISO MGI:2667341 (MGI:2665158|PMID:12796778) RGD PMID:12796778 MGI:2665158 NCBI chr10:63,884,338...63,921,709
Ensembl chr10:63,884,338...63,921,709
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (MGI:3851676|PMID:19409883) RGD PMID:19409883 MGI:3851676 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (MGI:3718270|PMID:17644613) RGD PMID:17644613 MGI:3718270 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3796260|PMID:18509043)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18509043 GO_REF:0000024 GO_REF:0000107 MGI:3796260 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (MGI:2149271|PMID:11517264) RGD PMID:11517264 MGI:2149271 NCBI chr 9:82,120,059...82,121,527
Ensembl chr 9:82,120,059...82,121,527
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:3701617 (MGI:4454697|PMID:20503375)
Ensembl
RGD
PMID:20503375 GO_REF:0000107 MGI:4454697 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5463669|PMID:23056358)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387757 (MGI:3844387|PMID:19342486)
Ensembl
RGD
PMID:19342486 GO_REF:0000107 MGI:3844387 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2176173|MGI:3798847 (MGI:4949945|PMID:21525285) RGD PMID:21525285 MGI:4949945 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr 5:127,404,348...127,476,636
Ensembl chr 5:127,404,450...127,476,641
JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5509338 (MGI:5507927|PMID:23097495) RGD PMID:23097495 MGI:5507927 NCBI chr 1:64,100,159...64,114,437
Ensembl chr 1:64,101,018...64,113,792
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (MGI:3629819|PMID:15385616) RGD PMID:15385616 MGI:3629819 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044 (MGI:3769085|PMID:17330141) RGD PMID:17330141 MGI:3769085 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856398 (MGI:5319303|PMID:20847152)
Ensembl
RGD
PMID:20847152 GO_REF:0000107 MGI:5319303 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO MGI:5545789 (MGI:5545793|PMID:24210661) RGD PMID:24210661 MGI:5545793 NCBI chr10:85,301,797...85,337,971
Ensembl chr10:85,301,875...85,330,397
JBrowse link
motogenic signaling involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within ISO (MGI:5578117|PMID:25099998) RGD PMID:25099998 MGI:5578117 NCBI chr10:3,411,380...3,570,689
Ensembl chr10:3,411,380...3,570,688
JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23472759) RGD PMID:23472759 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr12:17,488,482...17,533,334
Ensembl chr12:17,488,487...17,522,534
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 6:98,884,269...99,153,551 JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within ISO MGI:3043746 (MGI:5554963|PMID:24192035) RGD PMID:24192035 MGI:5554963 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
pyramidal neuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:5440366 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614
JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:19581563)
GO_REF:0000107
RGD
Ensembl
PMID:19581563 GO_REF:0000107 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        pallium development 237
          cerebral cortex development + 151
          hippocampus development + 123
          pallium cell proliferation in forebrain + 1
Path 2
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        multicellular organism development 5747
          system development 5290
            nervous system development 2718
              central nervous system development 1266
                brain development 972
                  forebrain development 509
                    telencephalon development 341
                      pallium development 237
                        cerebral cortex development + 151
                        hippocampus development + 123
                        pallium cell proliferation in forebrain + 1
paths to the root