ONTOLOGY REPORT - ANNOTATIONS |
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Term: | embryonic epithelial tube formation |
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Accession: | GO:0001838
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browse the term
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Definition: | The morphogenesis of an embryonic epithelium into a tube-shaped structure. |
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GViewer not supported for the selected species.
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Ret |
ret proto-oncogene |
acts_upstream_of_or_within |
ISO |
(PMID:15569713) |
MGI |
PMID:15569713 |
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NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946
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Shank3 |
SH3 and multiple ankyrin repeat domains 3 |
acts_upstream_of_or_within |
ISO |
(PMID:15569713) |
MGI |
PMID:15569713 |
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NCBI chrNW_004955413:33,660,025...33,714,649
Ensembl chrNW_004955413:33,660,022...33,712,796
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Wnt4 |
Wnt family member 4 |
acts_upstream_of_or_within |
ISO |
(PMID:16546160) |
MGI |
PMID:16546160 |
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NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
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Casp3 |
caspase 3 |
acts_upstream_of_or_within |
ISO |
(PMID:21515572) |
MGI |
PMID:21515572 |
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NCBI chrNW_004955403:24,315,712...24,326,271
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Folr1 |
folate receptor alpha |
involved_in |
ISO |
(PMID:17286298) |
BHF-UCL |
PMID:17286298 |
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NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728
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Grhl2 |
grainyhead like transcription factor 2 |
acts_upstream_of_or_within |
ISO |
(PMID:21515572) |
MGI |
PMID:21515572 |
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NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
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Specc1l |
sperm antigen with calponin homology and coiled-coil domains 1 like |
acts_upstream_of_or_within |
ISO |
(PMID:26787558) |
MGI |
PMID:26787558 |
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NCBI chrNW_004955455:7,739,105...7,879,489
Ensembl chrNW_004955455:7,739,463...7,882,427
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Gatad2a |
GATA zinc finger domain containing 2A |
acts_upstream_of_or_within |
ISO |
(PMID:17565372) |
MGI |
PMID:17565372 |
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NCBI chrNW_004955524:2,439,594...2,506,539
Ensembl chrNW_004955524:2,439,594...2,506,538
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Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
(PMID:8622765) |
MGI |
PMID:8622765 |
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NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
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Hand1 |
heart and neural crest derivatives expressed 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11076684) |
MGI |
PMID:11076684 |
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NCBI chrNW_004955408:8,848,723...8,851,804
Ensembl chrNW_004955408:8,848,559...8,851,994
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Cthrc1 |
collagen triple helix repeat containing 1 |
acts_upstream_of_or_within |
ISO |
(PMID:18606138) |
MGI |
PMID:18606138 |
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NCBI chrNW_004955417:27,520,420...27,525,907
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Vangl2 |
VANGL planar cell polarity protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18606138) |
MGI |
PMID:18606138 |
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NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
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Kdm2b |
lysine demethylase 2B |
involved_in |
ISO |
(PMID:21220025) |
BHF-UCL |
PMID:21220025 |
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NCBI chrNW_004955482:6,774,021...6,885,113
Ensembl chrNW_004955482:6,774,059...6,887,171
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Hnf1b |
HNF1 homeobox B |
acts_upstream_of_or_within |
ISO |
(PMID:20040500) |
MGI |
PMID:20040500 |
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NCBI chrNW_004955451:320,283...371,420
Ensembl chrNW_004955451:320,283...371,420
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Wnt9b |
Wnt family member 9B |
acts_upstream_of_or_within |
ISO |
(PMID:16054034) |
MGI |
PMID:16054034 |
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NCBI chrNW_004955478:10,816,405...10,841,416
Ensembl chrNW_004955478:10,816,405...10,841,416
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Pax2 |
paired box 2 |
involved_in |
ISO |
(PMID:17300925) |
UniProt |
PMID:17300925 |
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NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
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Six1 |
SIX homeobox 1 |
involved_in |
ISO |
(PMID:17300925) |
UniProt |
PMID:17300925 |
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NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069
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Pax2 |
paired box 2 |
involved_in |
ISO |
(PMID:17314325) |
UniProt |
PMID:17314325 |
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NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
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Pax8 |
paired box 8 |
involved_in |
ISO |
(PMID:17314325) |
UniProt |
PMID:17314325 |
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NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
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Sox8 |
SRY-box transcription factor 8 |
acts_upstream_of_or_within |
ISO |
(PMID:21212101) |
MGI |
PMID:21212101 |
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NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
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Sox9 |
SRY-box transcription factor 9 |
acts_upstream_of_or_within |
ISO |
(PMID:21212101) |
MGI |
PMID:21212101 |
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NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Gata3 |
GATA binding protein 3 |
involved_in |
ISO |
(PMID:19112489) |
UniProt |
PMID:19112489 |
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NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
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Gata3 |
GATA binding protein 3 |
involved_in |
ISO |
(PMID:19112489) |
UniProt |
PMID:19112489 |
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NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
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Ctnnb1 |
catenin beta 1 |
acts_upstream_of_or_within |
ISO |
(PMID:17537789) |
MGI |
PMID:17537789 |
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NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
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Wnt6 |
Wnt family member 6 |
acts_upstream_of_or_within |
ISO |
(PMID:11948913) |
MGI |
PMID:11948913 |
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NCBI chrNW_004955453:14,547,427...14,560,001
Ensembl chrNW_004955453:14,545,700...14,560,976
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Luzp1 |
leucine zipper protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:18801334) |
MGI |
PMID:18801334 |
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NCBI chrNW_004955452:3,105,827...3,188,762
Ensembl chrNW_004955452:3,109,663...3,189,416
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Bmp5 |
bone morphogenetic protein 5 |
involved_in |
ISO |
(PMID:10079236) |
BHF-UCL |
PMID:10079236 |
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NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
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Bmp7 |
bone morphogenetic protein 7 |
involved_in |
ISO |
(PMID:10079236) |
BHF-UCL |
PMID:10079236 |
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NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
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Hif1a |
hypoxia inducible factor 1 subunit alpha |
acts_upstream_of_or_within |
ISO |
(PMID:10328919) |
MGI |
PMID:10328919 |
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NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
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Cecr2 |
cat eye syndrome chromosome region, candidate 2 |
acts_upstream_of_or_within |
ISO |
(PMID:21246654) |
MGI |
PMID:21246654 |
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NCBI chrNW_004955454:5,581,985...5,643,685
Ensembl chrNW_004955454:5,581,981...5,640,712
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Cfl1 |
cofilin 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15649475) |
MGI |
PMID:15649475 |
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NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571
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Gatad2a |
GATA zinc finger domain containing 2A |
acts_upstream_of_or_within |
ISO |
(PMID:17565372) |
MGI |
PMID:17565372 |
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NCBI chrNW_004955524:2,439,594...2,506,539
Ensembl chrNW_004955524:2,439,594...2,506,538
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
(PMID:11311163) |
MGI |
PMID:11311163 |
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NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
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Ovol2 |
ovo like zinc finger 2 |
acts_upstream_of_or_within |
ISO |
(PMID:16423343) |
MGI |
PMID:16423343 |
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NCBI chrNW_004955415:26,825,284...26,843,438
Ensembl chrNW_004955415:26,825,284...26,843,438
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Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
(PMID:9883720) |
MGI |
PMID:9883720 |
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NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
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Abl2 |
ABL proto-oncogene 2, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
(PMID:9883720) |
MGI |
PMID:9883720 |
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NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698
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Adm |
adrenomedullin |
acts_upstream_of_or_within |
ISO |
(PMID:16981008) |
MGI |
PMID:16981008 |
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NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645
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Apaf1 |
apoptotic peptidase activating factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11504943), (PMID:9216040) |
MGI |
PMID:9216040 PMID:11504943 |
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NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677
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Arhgap35 |
Rho GTPase activating protein 35 |
acts_upstream_of_or_within |
ISO |
(PMID:11044403) |
MGI |
PMID:11044403 |
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NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
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Arid1a |
AT-rich interaction domain 1A |
acts_upstream_of_or_within |
ISO |
(PMID:23129809) |
MGI |
PMID:23129809 |
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NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759
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Bbs4 |
Bardet-Biedl syndrome 4 |
acts_upstream_of_or_within |
ISO |
(PMID:16170314) |
MGI |
PMID:16170314 |
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NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719
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Bcl10 |
BCL10 immune signaling adaptor |
involved_in |
ISO |
(PMID:11163238) |
UniProt |
PMID:11163238 |
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NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
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Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within |
ISO |
(PMID:19850029) |
MGI |
PMID:19850029 |
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NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Brd2 |
bromodomain containing 2 |
acts_upstream_of_or_within |
ISO |
(PMID:19362612) |
MGI |
PMID:19362612 |
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NCBI chrNW_004955437:1,584,890...1,592,486
Ensembl chrNW_004955437:1,584,479...1,592,826
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Cc2d2a |
coiled-coil and C2 domain containing 2A |
acts_upstream_of_or_within |
ISO |
(PMID:24947469) |
MGI |
PMID:24947469 |
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NCBI chrNW_004955480:8,404,239...8,514,792
Ensembl chrNW_004955480:8,400,284...8,514,736
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Cecr2 |
cat eye syndrome chromosome region, candidate 2 |
acts_upstream_of_or_within |
ISO |
(PMID:15640247) (PMID:20589882) (PMID:21246654) |
MGI |
PMID:15640247 PMID:20589882 PMID:21246654 |
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NCBI chrNW_004955454:5,581,985...5,643,685
Ensembl chrNW_004955454:5,581,981...5,640,712
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Celsr1 |
cadherin EGF LAG seven-pass G-type receptor 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:17229766) (PMID:12842012) |
MGI UniProt |
PMID:12842012 PMID:17229766 |
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NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
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Cited2 |
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 |
acts_upstream_of_or_within |
ISO |
(PMID:12149478) |
MGI |
PMID:12149478 |
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NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
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Cluap1 |
clusterin associated protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:23742838) |
MGI |
PMID:23742838 |
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NCBI chrNW_004955442:13,843,952...13,890,082
Ensembl chrNW_004955442:13,842,784...13,885,860
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Deaf1 |
DEAF1 transcription factor |
involved_in |
ISO |
(PMID:14966286) |
UniProt |
PMID:14966286 |
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NCBI chrNW_004955476:11,398,187...11,422,633
Ensembl chrNW_004955476:11,398,448...11,423,654
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Dlc1 |
DLC1 Rho GTPase activating protein |
acts_upstream_of_or_within |
ISO |
(PMID:15710412) |
MGI |
PMID:15710412 |
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NCBI chrNW_004955463:3,599,415...3,981,187
Ensembl chrNW_004955463:3,598,985...3,990,849
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Dvl2 |
dishevelled segment polarity protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:12421720) |
MGI |
PMID:12421720 |
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NCBI chrNW_004955467:9,675,912...9,683,996
Ensembl chrNW_004955467:9,675,912...9,683,996
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Enah |
ENAH actin regulator |
acts_upstream_of_or_within |
ISO |
(PMID:10069337) (PMID:15371503) |
MGI |
PMID:10069337 PMID:15371503 |
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NCBI chrNW_004955520:310,482...374,800
Ensembl chrNW_004955520:308,070...371,922
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Fuz |
fuzzy planar cell polarity protein |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:19767740), (PMID:21840926) (PMID:19877275) (PMID:21840926) |
UniProt MGI |
PMID:19767740 PMID:19877275 PMID:21840926 |
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NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413
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Fzd3 |
frizzled class receptor 3 |
acts_upstream_of_or_within |
ISO |
(PMID:16495441) |
MGI |
PMID:16495441 |
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NCBI chrNW_004955403:50,899,658...50,959,077
Ensembl chrNW_004955403:50,899,523...50,959,071
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Fzd6 |
frizzled class receptor 6 |
acts_upstream_of_or_within |
ISO |
(PMID:16495441) |
MGI |
PMID:16495441 |
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NCBI chrNW_004955417:27,465,730...27,493,752
Ensembl chrNW_004955417:27,465,701...27,494,790
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Glmn |
glomulin, FKBP associated protein |
acts_upstream_of_or_within |
ISO |
(PMID:22405651) |
MGI |
PMID:22405651 |
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NCBI chrNW_004955423:2,195,428...2,233,389
Ensembl chrNW_004955423:2,195,423...2,232,706
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Grhl2 |
grainyhead like transcription factor 2 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:21262862) (PMID:20654612), (PMID:20978075) |
MGI UniProt |
PMID:20654612 PMID:20978075 PMID:21262862 |
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NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
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Grhl3 |
grainyhead like transcription factor 3 |
involved_in |
ISO |
(PMID:16949565), (PMID:20654612) |
UniProt |
PMID:16949565 PMID:20654612 |
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NCBI chrNW_004955452:4,125,792...4,159,699
Ensembl chrNW_004955452:4,128,269...4,160,683
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Hectd1 |
HECT domain E3 ubiquitin protein ligase 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:15755804), (PMID:9636176) (PMID:17442300) |
MGI UniProt |
PMID:9636176 PMID:15755804 PMID:17442300 |
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NCBI chrNW_004955409:29,373,572...29,470,623
Ensembl chrNW_004955409:29,373,572...29,470,623
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Ift122 |
intraflagellar transport 122 |
involved_in |
ISO |
(PMID:19000668) |
UniProt |
PMID:19000668 |
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NCBI chrNW_004955429:17,795,757...17,858,609
Ensembl chrNW_004955429:17,794,879...17,858,609
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Ift172 |
intraflagellar transport 172 |
acts_upstream_of_or_within |
ISO |
(PMID:18930042) |
MGI |
PMID:18930042 |
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NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026
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Ift57 |
intraflagellar transport 57 |
acts_upstream_of_or_within |
ISO |
(PMID:17027958) |
MGI |
PMID:17027958 |
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NCBI chrNW_004955427:8,814,298...8,871,671
Ensembl chrNW_004955427:8,814,298...8,871,720
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Kat2a |
lysine acetyltransferase 2A |
acts_upstream_of_or_within |
ISO |
(PMID:17325035) |
MGI |
PMID:17325035 |
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NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
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Kdm2a |
lysine demethylase 2A |
acts_upstream_of_or_within |
ISO |
(PMID:25463925) |
MGI |
PMID:25463925 |
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NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
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Kdm6a |
lysine demethylase 6A |
acts_upstream_of_or_within |
ISO |
(PMID:22949634) |
MGI |
PMID:22949634 |
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NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832
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Kif20b |
kinesin family member 20B |
acts_upstream_of_or_within |
ISO |
(PMID:15755804) |
MGI |
PMID:15755804 |
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NCBI chrNW_004955425:3,261,269...3,313,891
Ensembl chrNW_004955425:3,261,450...3,308,416
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Lhx2 |
LIM homeobox 2 |
acts_upstream_of_or_within |
ISO |
(PMID:11719201) |
MGI |
PMID:11719201 |
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NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
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G |
Lias |
lipoic acid synthetase |
acts_upstream_of_or_within |
ISO |
(PMID:15755804) |
MGI |
PMID:15755804 |
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NCBI chrNW_004955443:7,889,274...7,907,560
Ensembl chrNW_004955443:7,889,467...7,907,437
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G |
Lmo4 |
LIM domain only 4 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:15691703) (PMID:14966285) (PMID:16949565) |
MGI UniProt |
PMID:14966285 PMID:15691703 PMID:16949565 |
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NCBI chrNW_004955423:6,849,542...6,865,928
Ensembl chrNW_004955423:6,849,555...6,866,137
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G |
Lrp2 |
LDL receptor related protein 2 |
involved_in |
ISO |
(PMID:24639464) |
UniProt |
PMID:24639464 |
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NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948
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G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
(PMID:10545599) (PMID:19653321) (PMID:15469977) (PMID:19795512) (PMID:19056682) |
MGI |
PMID:10545599 PMID:15469977 PMID:19056682 PMID:19653321 PMID:19795512 |
MGI:61254 |
NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
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G |
Med12 |
mediator complex subunit 12 |
acts_upstream_of_or_within |
ISO |
(PMID:20630950) |
MGI |
PMID:20630950 |
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NCBI chrNW_004955475:10,687,168...10,710,286
Ensembl chrNW_004955475:10,687,367...10,710,053
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G |
Mks1 |
MKS transition zone complex subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:23454480) (PMID:19776033) |
MGI |
PMID:19776033 PMID:23454480 |
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NCBI chrNW_004955451:4,805,542...4,818,233
Ensembl chrNW_004955451:4,804,838...4,821,556
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G |
Mthfd1 |
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 |
involved_in |
ISO |
(PMID:23704330) |
BHF-UCL |
PMID:23704330 |
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NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
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G |
Mthfd1l |
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like |
involved_in |
ISO |
(PMID:23267094) |
BHF-UCL |
PMID:23267094 |
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NCBI chrNW_004955439:10,432,732...10,621,991
Ensembl chrNW_004955439:10,438,883...10,621,768
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G |
Mthfr |
methylenetetrahydrofolate reductase |
acts_upstream_of |
ISO |
(PMID:25855017), (PMID:29222906) |
BHF-UCL |
PMID:25855017 PMID:29222906 |
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NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240
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G |
Nckap1 |
NCK associated protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16831833) |
MGI |
PMID:16831833 |
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NCBI chrNW_004955403:14,476,689...14,554,380
Ensembl chrNW_004955403:14,480,162...14,554,702
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G |
Nog |
noggin |
acts_upstream_of_or_within |
ISO |
(PMID:16712836) |
MGI |
PMID:16712836 |
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NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
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G |
Opa1 |
OPA1 mitochondrial dynamin like GTPase |
acts_upstream_of_or_within |
ISO |
(PMID:15755804) |
MGI |
PMID:15755804 |
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NCBI chrNW_004955420:14,927,490...15,007,082
Ensembl chrNW_004955420:14,923,575...15,007,081
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G |
Pax2 |
paired box 2 |
involved_in |
ISO |
(PMID:8951055) |
DFLAT |
PMID:8951055 |
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NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
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G |
Pax3 |
paired box 3 |
acts_upstream_of_or_within |
ISO |
(PMID:15384171) |
MGI |
PMID:15384171 |
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NCBI chrNW_004955453:11,463,407...11,558,001
Ensembl chrNW_004955453:11,463,379...11,558,006
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G |
Pfn1 |
profilin 1 |
acts_upstream_of_or_within |
ISO |
(PMID:10069337) |
MGI |
PMID:10069337 |
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NCBI chrNW_004955467:10,357,838...10,360,651
Ensembl chrNW_004955467:10,357,838...10,360,651
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G |
Phactr4 |
phosphatase and actin regulator 4 |
involved_in |
ISO |
(PMID:17609112) |
UniProt |
PMID:17609112 |
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NCBI chrNW_004955452:7,505,647...7,593,302
Ensembl chrNW_004955452:7,532,966...7,596,546
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G |
Plxnb2 |
plexin B2 |
involved_in |
ISO |
(PMID:17554007) |
UniProt |
PMID:17554007 |
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NCBI chrNW_004955413:33,297,617...33,314,371
Ensembl chrNW_004955413:33,298,317...33,309,961
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G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
ISO |
(PMID:25190059) (PMID:21901791) |
MGI UniProt |
PMID:21901791 PMID:25190059 |
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NCBI chrNW_004955500:1,897,899...1,990,791
Ensembl chrNW_004955500:1,897,912...1,990,875
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G |
Prkaca |
protein kinase cAMP-activated catalytic subunit alpha |
acts_upstream_of_or_within |
ISO |
(PMID:22007132) |
MGI |
PMID:22007132 |
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NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
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G |
Prkacb |
protein kinase cAMP-activated catalytic subunit beta |
acts_upstream_of_or_within |
ISO |
(PMID:22007132) |
MGI |
PMID:22007132 |
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NCBI chrNW_004955423:9,630,308...9,747,820
Ensembl chrNW_004955423:9,629,378...9,747,820
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G |
Ptch1 |
patched 1 |
acts_upstream_of_or_within |
ISO |
(PMID:9262482) |
MGI |
PMID:9262482 |
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NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622
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G |
Ptk7 |
protein tyrosine kinase 7 (inactive) |
acts_upstream_of_or_within |
ISO |
(PMID:15229603) (PMID:20704721) |
MGI |
PMID:15229603 PMID:20704721 |
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NCBI chrNW_004955437:9,037,933...9,094,237
Ensembl chrNW_004955437:9,037,661...9,094,287
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G |
Rab23 |
RAB23, member RAS oncogene family |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:7720556) (PMID:9636176) |
UniProt MGI |
PMID:7720556 PMID:9636176 |
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NCBI chrNW_004955502:2,947,170...2,980,634
Ensembl chrNW_004955502:2,950,562...2,980,634
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G |
Rala |
RAS like proto-oncogene A |
involved_in |
ISO |
(PMID:23063435) |
CACAO |
PMID:23063435 |
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NCBI chrNW_004955460:3,789,136...3,853,315
Ensembl chrNW_004955460:3,789,136...3,808,676
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G |
Rara |
retinoic acid receptor alpha |
acts_upstream_of_or_within |
ISO |
(PMID:7607067) |
MGI |
PMID:7607067 |
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NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
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|
G |
Rarg |
retinoic acid receptor gamma |
acts_upstream_of_or_within |
ISO |
(PMID:7607067) |
MGI |
PMID:7607067 |
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NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
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G |
Rgma |
repulsive guidance molecule BMP co-receptor a |
acts_upstream_of_or_within |
ISO |
(PMID:14749425) |
MGI |
PMID:14749425 |
|
NCBI chrNW_004955416:21,221,023...21,261,831
Ensembl chrNW_004955416:21,221,023...21,261,831
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G |
Rock2 |
Rho associated coiled-coil containing protein kinase 2 |
acts_upstream_of_or_within |
ISO |
(PMID:17229766) |
MGI |
PMID:17229766 |
|
NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
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|
G |
Rps7 |
ribosomal protein S7 |
acts_upstream_of_or_within |
ISO |
(PMID:15384171) |
MGI |
PMID:15384171 |
|
NCBI chrNW_004955487:3,793,168...3,798,007
Ensembl chrNW_004955487:3,792,870...3,798,153
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|
G |
Sall1 |
spalt like transcription factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16790473) |
MGI |
PMID:16790473 |
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NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171
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|
G |
Sall4 |
spalt like transcription factor 4 |
acts_upstream_of_or_within |
ISO |
(PMID:16790473) |
MGI |
PMID:16790473 |
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NCBI chrNW_004955445:6,824,797...6,841,141
Ensembl chrNW_004955445:6,824,770...6,842,187
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|
G |
Scrib |
scribble planar cell polarity protein |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:22095531) (PMID:21515572) (PMID:20643356) |
UniProt MGI |
PMID:20643356 PMID:21515572 PMID:22095531 |
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NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
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|
G |
Sdc4 |
syndecan 4 |
acts_upstream_of_or_within |
ISO |
(PMID:23760952) |
MGI |
PMID:23760952 |
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NCBI chrNW_004955445:11,990,916...12,009,178
Ensembl chrNW_004955445:11,990,792...12,011,553
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G |
Sec24b |
SEC24 homolog B, COPII coat complex component |
acts_upstream_of_or_within |
ISO |
(PMID:19966784) (PMID:20215345) |
MGI |
PMID:19966784 PMID:20215345 |
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NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
|
|
G |
Sema4c |
semaphorin 4C |
involved_in |
ISO |
(PMID:21122816) |
UniProt |
PMID:21122816 |
|
NCBI chrNW_004955470:4,213,006...4,220,167
Ensembl chrNW_004955470:4,213,006...4,220,169
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|
G |
Setd2 |
SET domain containing 2, histone lysine methyltransferase |
acts_upstream_of_or_within |
ISO |
(PMID:20133625) |
MGI |
PMID:20133625 |
|
NCBI chrNW_004955420:25,070,626...25,178,410
Ensembl chrNW_004955420:25,090,798...25,177,760
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|
G |
Sfrp1 |
secreted frizzled related protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:19850029) |
MGI |
PMID:19850029 |
|
NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
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|
G |
Sfrp2 |
secreted frizzled related protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:19850029) |
MGI |
PMID:19850029 |
|
NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
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|
G |
Shroom3 |
shroom family member 3 |
acts_upstream_of_or_within |
ISO |
(PMID:16249236) |
MGI |
PMID:16249236 |
|
NCBI chrNW_004955433:1,135,589...1,423,449
Ensembl chrNW_004955433:1,358,444...1,422,498
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|
G |
Ski |
SKI proto-oncogene |
acts_upstream_of_or_within |
ISO |
(PMID:9284043) |
MGI |
PMID:9284043 |
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NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
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G |
Spint1 |
serine peptidase inhibitor, Kunitz type 1 |
acts_upstream_of_or_within |
ISO |
(PMID:19592578) |
MGI |
PMID:19592578 |
|
NCBI chrNW_004955416:7,715,536...7,728,759
Ensembl chrNW_004955416:7,715,536...7,729,158
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|
G |
Spint2 |
serine peptidase inhibitor, Kunitz type 2 |
acts_upstream_of_or_within |
ISO |
(PMID:19592578) |
MGI |
PMID:19592578 |
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NCBI chrNW_004955468:1,142,718...1,181,210
Ensembl chrNW_004955468:1,143,118...1,169,632
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|
G |
St14 |
ST14 transmembrane serine protease matriptase |
acts_upstream_of_or_within |
ISO |
(PMID:19592578) |
MGI |
PMID:19592578 |
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NCBI chrNW_004955412:31,091,313...31,129,050
Ensembl chrNW_004955412:31,090,504...31,129,050
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G |
Stil |
STIL centriolar assembly protein |
acts_upstream_of_or_within |
ISO |
(PMID:10385121) |
MGI |
PMID:10385121 |
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NCBI chrNW_004955464:11,213,265...11,288,648
Ensembl chrNW_004955464:11,228,667...11,289,648
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G |
Sufu |
SUFU negative regulator of hedgehog signaling |
acts_upstream_of_or_within |
ISO |
(PMID:16155214) |
MGI |
PMID:16155214 |
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NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677
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G |
Tbxt |
T-box transcription factor T |
acts_upstream_of_or_within |
ISO |
(PMID:16835439) |
MGI |
PMID:16835439 |
|
NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554
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G |
Tead2 |
TEA domain transcription factor 2 |
acts_upstream_of_or_within |
ISO |
(PMID:17868131) |
MGI |
PMID:17868131 |
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NCBI chrNW_004955559:1,450,706...1,465,947
Ensembl chrNW_004955559:1,450,706...1,465,947
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G |
Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
(PMID:8622766), (PMID:9811866) |
MGI |
PMID:8622766 PMID:9811866 |
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NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
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G |
Tgfb1 |
transforming growth factor beta 1 |
involved_in |
ISO |
(PMID:7600998) |
BHF-UCL |
PMID:7600998 |
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NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
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G |
Tgfb2 |
transforming growth factor beta 2 |
involved_in |
ISO |
(PMID:9217007) |
BHF-UCL |
PMID:9217007 |
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NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
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G |
Tgif1 |
TGFB induced factor homeobox 1 |
acts_upstream_of_or_within |
ISO |
(PMID:17082251) |
MGI |
PMID:17082251 |
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NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340
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G |
Tmed2 |
transmembrane p24 trafficking protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:20178780) |
MGI |
PMID:20178780 |
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NCBI chrNW_004955482:5,404,739...5,415,243
Ensembl chrNW_004955482:5,404,739...5,415,243
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G |
Traf6 |
TNF receptor associated factor 6 |
involved_in |
ISO |
(PMID:11007897) |
UniProt |
PMID:11007897 |
|
NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100
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G |
Trim71 |
tripartite motif containing 71 |
acts_upstream_of_or_within |
ISO |
(PMID:19098426) |
MGI |
PMID:19098426 |
|
NCBI chrNW_004955421:97,130...174,326
Ensembl chrNW_004955421:97,772...168,432
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G |
Tsc1 |
TSC complex subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:11438694) |
MGI |
PMID:11438694 |
|
NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992
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|
G |
Tsc2 |
TSC complex subunit 2 |
acts_upstream_of_or_within |
ISO |
(PMID:10096549) |
MGI |
PMID:10096549 |
|
NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362
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G |
Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
(PMID:19223390) |
MGI |
PMID:19223390 |
|
NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
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G |
Twist1 |
twist family bHLH transcription factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:7729687) |
MGI |
PMID:7729687 |
|
NCBI chrNW_004955410:22,003,981...22,005,483
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G |
Vangl2 |
VANGL planar cell polarity protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:19966784) (PMID:21246654) (PMID:17433286) (PMID:17229766) (PMID:14512015) (PMID:23760952) (PMID:11709546), (PMID:12499390) (PMID:15229603) |
MGI |
PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 PMID:17433286 PMID:19966784 PMID:21246654 PMID:23760952 More...
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NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
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|
G |
Vasp |
vasodilator stimulated phosphoprotein |
acts_upstream_of_or_within |
ISO |
(PMID:15371503) |
MGI |
PMID:15371503 |
|
NCBI chrNW_004955574:21,569...33,705
Ensembl chrNW_004955574:21,911...34,197
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|
G |
Wdr83 |
WD repeat domain 83 |
acts_upstream_of_or_within |
ISO |
(PMID:37509073) |
MGI |
PMID:37509073 |
|
NCBI chrNW_004955415:31,774,017...31,778,737
Ensembl chrNW_004955415:31,774,017...31,778,737
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|
G |
Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
(PMID:17433286) (PMID:19795512) |
MGI |
PMID:17433286 PMID:19795512 |
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NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
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|
G |
Zeb2 |
zinc finger E-box binding homeobox 2 |
acts_upstream_of_or_within |
ISO |
(PMID:16598713) |
MGI |
PMID:16598713 |
|
NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
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|
G |
Zic2 |
Zic family member 2 |
acts_upstream_of_or_within |
ISO |
(PMID:15384171) |
MGI |
PMID:15384171 |
|
NCBI chrNW_004955404:10,731,987...10,735,599
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|
G |
Zic5 |
Zic family member 5 |
acts_upstream_of_or_within |
ISO |
(PMID:15136147) |
MGI |
PMID:15136147 |
|
NCBI chrNW_004955404:10,745,551...10,752,006
Ensembl chrNW_004955404:10,745,620...10,751,872
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|
|
G |
Brpf1 |
bromodomain and PHD finger containing 1 |
acts_upstream_of_or_within |
ISO |
(PMID:27528195) |
MGI |
PMID:27528195 |
|
NCBI chrNW_004955561:1,260,237...1,275,953
Ensembl chrNW_004955561:1,259,700...1,276,015
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|
G |
Casp8 |
caspase 8 |
acts_upstream_of_or_within |
ISO |
(PMID:12404118) |
MGI |
PMID:12404118 |
|
NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
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|
G |
Cited2 |
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 |
acts_upstream_of_or_within |
ISO |
(PMID:11694877) |
MGI |
PMID:11694877 |
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NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
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G |
Coq7 |
coenzyme Q7, hydroxylase |
acts_upstream_of_or_within |
ISO |
(PMID:11716496) |
MGI |
PMID:11716496 |
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NCBI chrNW_004955442:3,026,458...3,033,582
Ensembl chrNW_004955442:3,025,484...3,033,582
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G |
Ift172 |
intraflagellar transport 172 |
acts_upstream_of_or_within |
ISO |
(PMID:14603322) |
MGI |
PMID:14603322 |
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NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026
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G |
Ift52 |
intraflagellar transport 52 |
acts_upstream_of_or_within |
ISO |
(PMID:15930098) |
MGI |
PMID:15930098 |
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NCBI chrNW_004955445:13,542,726...13,580,204
Ensembl chrNW_004955445:13,543,804...13,580,204
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G |
Ipmk |
inositol polyphosphate multikinase |
acts_upstream_of_or_within |
ISO |
(PMID:15939867) |
MGI |
PMID:15939867 |
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NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
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G |
Map3k7 |
mitogen-activated protein kinase kinase kinase 7 |
acts_upstream_of_or_within |
ISO |
(PMID:16260493) |
MGI |
PMID:16260493 |
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NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
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G |
Mib1 |
MIB E3 ubiquitin protein ligase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16000382) |
MGI |
PMID:16000382 |
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NCBI chrNW_004955402:10,392,308...10,502,576
Ensembl chrNW_004955402:10,392,308...10,502,576
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G |
Nup50 |
nucleoporin 50 |
acts_upstream_of_or_within |
ISO |
(PMID:10891500) |
MGI |
PMID:10891500 |
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NCBI chrNW_004955413:29,595,498...29,615,167
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G |
Ptch1 |
patched 1 |
involved_in |
ISO |
(PMID:10500113) |
Roslin_Institute |
PMID:10500113 |
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NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622
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G |
Shh |
sonic hedgehog signaling molecule |
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ISO |
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RGD |
PMID:8124714 |
RGD:69996 |
NCBI chrNW_004955491:8,647,133...8,657,381
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G |
Stk3 |
serine/threonine kinase 3 |
acts_upstream_of_or_within |
ISO |
(PMID:19786569) |
MGI |
PMID:19786569 |
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NCBI chrNW_004955417:14,098,851...14,381,553
Ensembl chrNW_004955417:14,095,694...14,381,607
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G |
Stk4 |
serine/threonine kinase 4 |
acts_upstream_of_or_within |
ISO |
(PMID:19786569) |
MGI |
PMID:19786569 |
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NCBI chrNW_004955445:12,308,285...12,399,012
Ensembl chrNW_004955445:12,308,285...12,399,012
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G |
Tctn1 |
tectonic family member 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16357211) |
MGI |
PMID:16357211 |
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NCBI chrNW_004955482:7,504,554...7,533,605
Ensembl chrNW_004955482:7,504,532...7,528,542
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G |
Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
(PMID:11406614) |
MGI |
PMID:11406614 |
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NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
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G |
Gata3 |
GATA binding protein 3 |
involved_in |
ISO |
(PMID:19112489) |
UniProt |
PMID:19112489 |
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NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
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G |
Gdnf |
glial cell derived neurotrophic factor |
involved_in |
ISO |
(PMID:8657307) |
UniProt |
PMID:8657307 |
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NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
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G |
Six1 |
SIX homeobox 1 |
involved_in |
ISO |
(PMID:17300925) |
UniProt |
PMID:17300925 |
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NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069
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G |
Six4 |
SIX homeobox 4 |
involved_in |
ISO |
(PMID:17300925) |
UniProt |
PMID:17300925 |
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NCBI chrNW_004955466:8,902,728...8,915,685
Ensembl chrNW_004955466:8,902,517...8,915,723
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G |
Sec24b |
SEC24 homolog B, COPII coat complex component |
acts_upstream_of_or_within |
ISO |
(PMID:19966784) |
MGI |
PMID:19966784 |
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NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
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G |
Gdnf |
glial cell derived neurotrophic factor |
involved_in |
ISO |
PMID:19112489 |
UniProt |
PMID:19112489 |
RGD:8656008 |
NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
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G |
Gdf7 |
growth differentiation factor 7 |
acts_upstream_of_or_within |
ISO |
(PMID:10693795) |
MGI |
PMID:10693795 |
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NCBI chrNW_004955469:3,134,355...3,149,177
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G |
Osr1 |
odd-skipped related transcription factor 1 |
involved_in |
ISO |
(PMID:16790474) |
UniProt |
PMID:16790474 |
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NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
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G |
Hes5 |
hes family bHLH transcription factor 5 |
involved_in |
ISO |
(PMID:15821257) |
UniProt |
PMID:15821257 |
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NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
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G |
Irx1 |
iroquois homeobox 1 |
involved_in |
ISO |
(PMID:17875669) |
UniProt |
PMID:17875669 |
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NCBI chrNW_004955504:2,072,540...2,099,781
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G |
Irx2 |
iroquois homeobox 2 |
involved_in |
ISO |
(PMID:17875669) |
UniProt |
PMID:17875669 |
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NCBI chrNW_004955504:1,456,433...1,460,996
Ensembl chrNW_004955504:1,455,664...1,460,996
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G |
Irx3 |
iroquois homeobox 3 |
involved_in |
ISO |
(PMID:17875669) |
UniProt |
PMID:17875669 |
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NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369
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G |
Osr1 |
odd-skipped related transcription factor 1 |
involved_in |
ISO |
(PMID:16790474) |
UniProt |
PMID:16790474 |
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NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
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G |
Gata3 |
GATA binding protein 3 |
involved_in |
ISO |
(PMID:16319112) |
UniProt |
PMID:16319112 |
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NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
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G |
Gdnf |
glial cell derived neurotrophic factor |
involved_in |
ISO |
(PMID:8657307) |
UniProt |
PMID:8657307 |
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NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
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G |
Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:17522159) |
UniProt |
PMID:17522159 |
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NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
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G |
Hs2st1 |
heparan sulfate 2-O-sulfotransferase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:9637690) |
MGI |
PMID:9637690 |
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NCBI chrNW_004955423:7,090,246...7,253,608
Ensembl chrNW_004955423:7,091,765...7,253,339
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G |
Nog |
noggin |
involved_in |
ISO |
(PMID:17522159) |
UniProt |
PMID:17522159 |
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NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
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Term paths to the root
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