RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: interstitial cystitis
Accession: DOID:13949
browse the term
Definition: A condition with recurring discomfort or pain in the URINARY BLADDER and the surrounding pelvic region without an identifiable disease. Severity of pain in interstitial cystitis varies greatly and often is accompanied by increased urination frequency and urgency.
Synonyms: exact_synonym: interstitial cystitides; painful bladder syndrome; ulcerative cystitis
primary_id: MESH:D018856
xref: EFO:0008507 ; GARD:6787 ; NCI:C27189
For additional species annotation, visit the
Alliance of Genome Resources .
G
Adrb2
adrenoceptor beta 2
susceptibility
ISO
DNA:polymorphism:cds:p.R16G (human)
RGD
PMID:12442007
RGD:7175285
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
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Aif1
allograft inflammatory factor 1
treatment
IEP
RGD
PMID:30989724
RGD:405295490
NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
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Crp
C-reactive protein
ISO
protein:increased expression:serum
RGD
PMID:21284020
RGD:6907432
NCBI chr13:85,135,384...85,175,178
Ensembl chr13:85,124,977...85,175,178
G
Csf1
colony stimulating factor 1
treatment
ISO
RGD
PMID:22441309
RGD:7241234
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
G
Csf2
colony stimulating factor 2
IEP
protein:increased expression:urine
RGD
PMID:18848347
RGD:2317284
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
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Cxcl10
C-X-C motif chemokine ligand 10
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18957084
NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
G
Cxcl11
C-X-C motif chemokine ligand 11
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18957084
NCBI chr14:15,689,432...15,692,207
Ensembl chr14:15,689,424...15,692,271
G
Cxcl9
C-X-C motif chemokine ligand 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18957084
NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
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Erbb2
erb-b2 receptor tyrosine kinase 2
disease_progression
IEP
RGD
PMID:30989724
RGD:405295490
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
G
Erbb4
erb-b2 receptor tyrosine kinase 4
disease_progression
IEP
RGD
PMID:30989724
RGD:405295490
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Esr2
estrogen receptor 2
ISO
RGD
PMID:17522255
RGD:7364800
NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
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Mapk14
mitogen activated protein kinase 14
treatment
IEP
RGD
PMID:30989724
RGD:405295490
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
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Mki67
marker of proliferation Ki-67
ISO
RGD
PMID:21166752
RGD:6483539
NCBI chr 1:190,496,319...190,522,983
Ensembl chr 1:190,496,319...190,522,762
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Mtor
mechanistic target of rapamycin kinase
ISO
RGD
PMID:22738385
RGD:7245526
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Ngf
nerve growth factor
treatment
ISO
protein:increased expression:serum, urine
RGD
PMID:23028581 PMID:20227820 PMID:18162370
RGD:7242773 , RGD:7242781 , RGD:7242805
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Nos2
nitric oxide synthase 2
IEP
protein:increased expression:bladder
RGD
PMID:21179332
RGD:4891153
NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
G
Nrg1
neuregulin 1
disease_progression
IEP
RGD
PMID:30989724
RGD:405295490
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Tnf
tumor necrosis factor
treatment
ISO
RGD
PMID:16622179
RGD:7245525
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Vcam1
vascular cell adhesion molecule 1
ISO
protein:increased expression:bladder, urine
RGD
PMID:22441309
RGD:7241234
NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
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