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ONTOLOGY REPORT - ANNOTATIONS

Term:response to lipopolysaccharide
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Accession:GO:0032496 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms:exact_synonym: response to LPS
 broad_synonym: response to endotoxin

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response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:28842383 RGD:13446404 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:28842383 RGD:13446404 NCBI chrNW_004936636:292,631...341,999
Ensembl chrNW_004936636:292,709...340,393 		JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 ISO RGD PMID:18505788 RGD:2301058 NCBI chrNW_004936490:11,039,968...11,086,670
Ensembl chrNW_004936490:11,040,445...11,086,566 		JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 ISO RGD PMID:15134348 RGD:2301082 NCBI chrNW_004936578:5,838,044...5,916,287
Ensembl chrNW_004936578:5,837,993...5,916,274 		JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:17285300 RGD:2301914 NCBI chrNW_004936528:1,608,782...1,682,873
Ensembl chrNW_004936528:1,608,757...1,682,975 		JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:19703997) MGI PMID:19703997 NCBI chrNW_004936538:6,674,595...6,819,511
Ensembl chrNW_004936538:6,674,907...6,816,674 		JBrowse link
G Acod1 aconitate decarboxylase 1 acts_upstream_of_or_within ISO (PMID:7721348) MGI PMID:7721348 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11168643) Ensembl
MGI		 PMID:11168643 GO_REF:0000107 NCBI chrNW_004936659:1,598,252...1,642,615
Ensembl chrNW_004936659:1,598,177...1,600,262 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003 		JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:23838384 RGD:8695926 NCBI chrNW_004936606:1,911,104...2,007,109
Ensembl chrNW_004936606:1,948,743...2,007,163 		JBrowse link
G Adm adrenomedullin ISO RGD PMID:16378176 RGD:1625325 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Akap12 A-kinase anchoring protein 12 ISO RGD PMID:23912647 RGD:14348970 NCBI chrNW_004936489:4,237,466...4,258,408
Ensembl chrNW_004936489:4,237,439...4,261,141 		JBrowse link
G Akirin2 akirin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18066067) Ensembl
MGI		 PMID:18066067 GO_REF:0000107 NCBI chrNW_004936510:4,216,893...4,221,962
Ensembl chrNW_004936510:4,216,955...4,221,962 		JBrowse link
G Alad aminolevulinate dehydratase ISO plus D-galactosamine RGD PMID:19344711 RGD:4144148 NCBI chrNW_004936559:226,481...237,258
Ensembl chrNW_004936559:226,424...241,684 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004936558:4,362,693...4,387,705
Ensembl chrNW_004936558:4,362,654...4,390,414 		JBrowse link
G Alpl alkaline phosphatase, biomineralization associated ISO RGD PMID:11810315 RGD:2315621 NCBI chrNW_004936474:7,209,196...7,229,899
Ensembl chrNW_004936474:7,209,093...7,229,989 		JBrowse link
G Apob apolipoprotein B ISO RGD PMID:16719989 RGD:1599165 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144 		JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:18824919 RGD:2313129 NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107 		JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:8576237 PMID:10652239 RGD:1599265 RGD:4140434 NCBI chrNW_004936543:7,688,788...7,699,842
Ensembl chrNW_004936543:7,688,741...7,699,851 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:12589771 RGD:1599307 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:25712896 RGD:13507309 NCBI chrNW_004936558:3,300,941...3,357,595
Ensembl chrNW_004936558:3,300,941...3,357,941 		JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO RGD PMID:15024311 RGD:2301243 NCBI chrNW_004936472:168,745...173,996
Ensembl chrNW_004936472:168,750...173,968 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:18838949 RGD:11353808 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19703997) Ensembl
MGI		 PMID:19703997 GO_REF:0000107 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315 		JBrowse link
G Bdkrb1 bradykinin receptor B1 acts_upstream_of_or_within ISO (PMID:8602848) RGD
MGI		 PMID:8602848 PMID:19561153 RGD:5129225 NCBI chrNW_004936604:551,774...567,014 JBrowse link
G Bin1 bridging integrator 1 involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936469:44,128,308...44,185,739
Ensembl chrNW_004936469:44,127,970...44,185,246 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G C5ar1 complement C5a receptor 1 ISO RGD PMID:15322206 RGD:1600596 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374 		JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18289516 RGD:2293323 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp8 caspase 8 ISO RGD PMID:18289516 RGD:2293323 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922 		JBrowse link
G Casp9 caspase 9 ISO RGD PMID:18289516 RGD:2293323 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cckar cholecystokinin A receptor ISO RGD PMID:17622698 RGD:2313275 NCBI chrNW_004936477:3,306,898...3,314,659
Ensembl chrNW_004936477:3,306,874...3,314,714 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:19104678 RGD:2306302 NCBI chrNW_004936490:253,279...259,947
Ensembl chrNW_004936490:253,034...259,965 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,575,764...15,579,766
Ensembl chrNW_004936490:15,575,764...15,579,757 		JBrowse link
G Cd14 CD14 molecule ISO RGD PMID:16631199 RGD:2313381 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd6 CD6 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,932,596...1,943,671
Ensembl chrNW_004936581:1,932,668...1,969,126 		JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:17935670 RGD:2313436 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Cd96 CD96 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24658051) Ensembl
MGI		 PMID:24658051 GO_REF:0000107 NCBI chrNW_004936834:432,538...522,118
Ensembl chrNW_004936834:434,877...522,411 		JBrowse link
G Cfb complement factor B ISO RGD PMID:18023983 RGD:2311336 NCBI chrNW_004936727:1,595,872...1,602,274
Ensembl chrNW_004936727:1,595,499...1,602,215 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967 		JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:22092031 RGD:11344891 NCBI chrNW_004936578:98,489...113,125
Ensembl chrNW_004936578:98,273...113,153 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase ISO RGD PMID:17000237 RGD:6483342 NCBI chrNW_004936490:16,834,570...16,841,734
Ensembl chrNW_004936490:16,834,540...16,841,810 		JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19295473 PMID:19681872 RGD:2314645 RGD:2314676 NCBI chrNW_004936510:3,779,930...3,806,615
Ensembl chrNW_004936510:3,781,210...3,802,693 		JBrowse link
G Cnr2 cannabinoid receptor 2 ISO RGD PMID:18483180 RGD:2316221 NCBI chrNW_004936474:9,019,044...9,020,110
Ensembl chrNW_004936474:9,019,067...9,020,110 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Comt catechol-O-methyltransferase ISO RGD PMID:17573159 RGD:2289732 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:17539997 GO_REF:0000107 RGD:2303515 NCBI chrNW_004936586:5,739,038...5,850,317
Ensembl chrNW_004936586:5,739,337...5,850,312 		JBrowse link
G Csf1 colony stimulating factor 1 ISO RGD PMID:24882100 RGD:151667420 NCBI chrNW_004936704:1,372,137...1,393,355
Ensembl chrNW_004936704:1,378,103...1,393,542 		JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:24882100 RGD:151667420 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923 		JBrowse link
G Csf2rb colony stimulating factor 2 receptor subunit beta ISO RGD PMID:7643220 RGD:632531 NCBI chrNW_004936492:3,929,589...3,974,070 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO RGD PMID:9288136 RGD:2311389 NCBI chrNW_004936676:60,869...63,028
Ensembl chrNW_004936676:60,621...63,106 		JBrowse link
G Dcn decorin ISO RGD PMID:18471238 RGD:2311419 NCBI chrNW_004936507:7,887,259...7,923,055
Ensembl chrNW_004936507:7,884,654...7,922,961 		JBrowse link
G Dio2 iodothyronine deiodinase 2 ISO RGD PMID:16095572 RGD:2313697 NCBI chrNW_004936488:8,769,555...8,783,157 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:23271618 RGD:9588621 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696743) Ensembl
MGI		 PMID:19696743 GO_REF:0000107 NCBI chrNW_004936650:679,650...718,867
Ensembl chrNW_004936650:679,647...720,038 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026 		JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:16360659 RGD:4144129 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Ednra endothelin receptor type A ISO RGD PMID:20397012 RGD:4892341 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910 		JBrowse link
G Ednrb endothelin receptor type B ISO RGD PMID:20888431 RGD:4892334 NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ISO RGD PMID:15630703 RGD:2301739 NCBI chrNW_004936663:1,127,047...1,157,263
Ensembl chrNW_004936663:1,126,977...1,157,137 		JBrowse link
G Epha3 EPH receptor A3 ISO RGD PMID:15671251 RGD:1581943 NCBI chrNW_004936610:462,842...799,466
Ensembl chrNW_004936610:462,853...799,364 		JBrowse link
G Epo erythropoietin ISO RGD PMID:9321887 RGD:2313657 NCBI chrNW_004936543:742,722...745,332
Ensembl chrNW_004936543:743,537...745,343 		JBrowse link
G Erbin erbb2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:3,155,934...3,293,224
Ensembl chrNW_004936480:3,154,690...3,293,230 		JBrowse link
G Extl3 exostosin like glycosyltransferase 3 involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936675:1,448,381...1,479,735
Ensembl chrNW_004936675:1,448,366...1,477,216 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18305483) Ensembl
MGI		 PMID:18305483 GO_REF:0000107 NCBI chrNW_004936549:226,508...247,024
Ensembl chrNW_004936549:225,371...247,042 		JBrowse link
G F3 coagulation factor III, tissue factor ISO RGD PMID:16113797 RGD:2313752 NCBI chrNW_004936537:4,637,028...4,647,915
Ensembl chrNW_004936537:4,636,667...4,647,916 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:17899301 RGD:2290175 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Faslg Fas ligand ISO RGD PMID:17899301 RGD:2290175 NCBI chrNW_004936481:14,789,547...14,795,780 JBrowse link
G Fbxo3 F-box protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:4,200,791...4,232,929
Ensembl chrNW_004936533:4,200,757...4,234,145 		JBrowse link
G Fer FER tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:3,512,976...3,898,885
Ensembl chrNW_004936531:3,551,350...3,897,449 		JBrowse link
G Fgf10 fibroblast growth factor 10 ISO RGD PMID:19524256 RGD:2314159 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:19524256 RGD:2314159 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11389931 RGD:2293789 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30181393) Ensembl
MGI		 PMID:30181393 GO_REF:0000107 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179 		JBrowse link
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324 		JBrowse link
G Foxp3 forkhead box P3 ISO RGD PMID:19998507 RGD:38455980 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308 		JBrowse link
G Gch1 GTP cyclohydrolase 1 NOT|involved_in ISO (PMID:15604419)
(PMID:7678411), (PMID:9445252)		 UniProt PMID:7678411 PMID:9445252 PMID:15604419 NCBI chrNW_004936697:232,048...275,420 JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chrNW_004936694:2,051,362...2,053,812
Ensembl chrNW_004936694:2,051,325...2,053,818 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO RGD PMID:19699728 RGD:2315572 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Gja1 gap junction protein alpha 1 ISO RGD PMID:10909894 RGD:11568670 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987 		JBrowse link
G Gjb2 gap junction protein beta 2 ISO RGD PMID:10909894 RGD:11568670 NCBI chrNW_004936720:1,528,205...1,530,296
Ensembl chrNW_004936720:1,528,249...1,528,929 		JBrowse link
G Gjb6 gap junction protein beta 6 ISO RGD PMID:23023213 RGD:7364771 NCBI chrNW_004936720:1,485,895...1,494,673
Ensembl chrNW_004936720:1,493,733...1,494,518 		JBrowse link
G Gng12 G protein subunit gamma 12 ISO RGD PMID:19568691 RGD:2314443 NCBI chrNW_004936591:3,860,668...3,983,305
Ensembl chrNW_004936591:3,977,507...3,980,065 		JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chrNW_004936757:1,282,185...1,285,804
Ensembl chrNW_004936757:1,282,185...1,285,832 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 acts_upstream_of_or_within ISO (PMID:29402223) MGI PMID:29402223 NCBI chrNW_004936515:6,030,402...6,051,161 JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:23271618 PMID:24595367 RGD:9588621 RGD:9590254 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:24595367 RGD:9590254 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:19959191 RGD:2316737 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA
ISS		 Ensembl
AgBase		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936516:4,536,664...4,539,331
Ensembl chrNW_004936516:4,534,306...4,539,387 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:11679969 RGD:12904749 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chrNW_004936597:4,712,201...4,714,949 JBrowse link
G Hpgd 15-hydroxyprostaglandin dehydrogenase ISO RGD PMID:12399253 RGD:2316279 NCBI chrNW_004936516:5,551,192...5,578,796
Ensembl chrNW_004936516:5,550,203...5,578,832 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO (PMID:10545106) MGI PMID:10545106 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO RGD PMID:8569188 RGD:1624223 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20871155 RGD:4145345 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19234212) Ensembl
MGI		 PMID:19234212 GO_REF:0000107 NCBI chrNW_004936843:658,058...672,662
Ensembl chrNW_004936843:657,979...672,700 		JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in ISO (MGI:5562515|PMID:23872679) UniProt PMID:23872679 MGI:5562515 NCBI chrNW_004936500:8,953,809...8,975,261
Ensembl chrNW_004936500:8,953,049...8,973,978 		JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:19180987 RGD:2306698 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351 		JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 ISO RGD PMID:15930173 RGD:12743621 NCBI chrNW_004936478:20,511,490...20,518,251
Ensembl chrNW_004936478:20,510,137...20,518,306 		JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ISO RGD PMID:17594812 RGD:10045960 NCBI chrNW_004936785:358,128...406,751
Ensembl chrNW_004936785:356,168...406,773 		JBrowse link
G Il10 interleukin 10 ISO RGD PMID:18791499 PMID:19390478 RGD:2308944 RGD:5135010 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Il10ra interleukin 10 receptor subunit alpha ISO RGD PMID:12010759 RGD:628327 NCBI chrNW_004936542:3,099,484...3,113,159
Ensembl chrNW_004936542:3,099,430...3,113,210 		JBrowse link
G Il12a interleukin 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:6,166,060...6,180,652
Ensembl chrNW_004936519:6,175,261...6,180,396 		JBrowse link
G Il12rb2 interleukin 12 receptor subunit beta 2 acts_upstream_of_or_within ISO (PMID:11489994) MGI PMID:11489994 NCBI chrNW_004936591:4,238,720...4,310,847 JBrowse link
G Il13 interleukin 13 ISO RGD PMID:16522370 RGD:2317671 NCBI chrNW_004936647:2,529,933...2,532,503
Ensembl chrNW_004936647:2,530,491...2,532,373 		JBrowse link
G Il18bp interleukin 18 binding protein ISO RGD PMID:12788303 RGD:4889504 NCBI chrNW_004936498:1,353,569...1,358,312
Ensembl chrNW_004936498:1,355,749...1,361,117 		JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:19524137 RGD:2311077 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G Il1b interleukin 1 beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16423834), (PMID:18490713)
(PMID:18490713)		 RGD
MGI
Ensembl		 PMID:16423834 PMID:17201737 PMID:18490713 GO_REF:0000107 RGD:1626625 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO RGD PMID:17138728 PMID:23055766 RGD:1626670 RGD:6909174 NCBI chrNW_004936783:1,447,158...1,466,331
Ensembl chrNW_004936783:1,447,106...1,466,340 		JBrowse link
G Il23r interleukin 23 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:4,365,598...4,425,053
Ensembl chrNW_004936591:4,365,762...4,425,005 		JBrowse link
G Il6 interleukin 6 ISO RGD PMID:19410080 RGD:2306921 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Il6r interleukin 6 receptor ISO RGD PMID:7814800 RGD:1625445 NCBI chrNW_004936580:4,055,438...4,081,876
Ensembl chrNW_004936580:4,057,771...4,081,885 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549626), (PMID:12855817) Ensembl
MGI		 PMID:10549626 PMID:12855817 GO_REF:0000107 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817), (PMID:12872135) Ensembl
MGI		 PMID:12855817 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Jak2 Janus kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:111,722...243,627
Ensembl chrNW_004936503:110,963...241,867 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11389931 RGD:2293789 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17077304)
(PMID:18026101)		 Ensembl
MGI		 PMID:17077304 PMID:18026101 GO_REF:0000107 NCBI chrNW_004936548:5,125,583...5,132,490
Ensembl chrNW_004936548:5,125,555...5,133,078 		JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:18584961 RGD:13513902 NCBI chrNW_004936526:8,877,085...8,928,280
Ensembl chrNW_004936526:8,877,434...8,919,548 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12055258) Ensembl
MGI		 PMID:12055258 GO_REF:0000107 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:26004810 RGD:126790532 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25578313)
(MGI:5645190|PMID:25158758)		 UniProt PMID:25158758 PMID:25578313 MGI:5645190 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18845616) Ensembl
MGI		 PMID:18845616 GO_REF:0000107 NCBI chrNW_004936482:7,068,326...7,085,571
Ensembl chrNW_004936482:7,068,445...7,084,504 		JBrowse link
G Litaf lipopolysaccharide induced TNF factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22160695) Ensembl
MGI		 PMID:22160695 GO_REF:0000107 NCBI chrNW_004936530:9,409,378...9,421,974
Ensembl chrNW_004936530:9,409,692...9,421,974 		JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B ISO RGD PMID:17327369 RGD:1601383 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941 		JBrowse link
G LOC101954543 caspase-1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,230,060...3,240,496 JBrowse link
G LOC101954897 protein Wfdc21-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:533,146...537,224 JBrowse link
G LOC101954938 C-X-C motif chemokine 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,729,263...1,729,840
Ensembl chrNW_004936598:1,728,861...1,729,843 		JBrowse link
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G LOC101960095 antileukoproteinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,618,382...7,620,790
Ensembl chrNW_004936514:7,618,261...7,620,912 		JBrowse link
G LOC101961846 neutrophil elastase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10714686) Ensembl
MGI		 PMID:10714686 GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
G LOC101968921 angiotensin-converting enzyme ISO RGD PMID:19114890 RGD:2325231 NCBI chrNW_004936541:4,157,847...4,178,156
Ensembl chrNW_004936541:4,157,393...4,178,177 		JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:18308837 RGD:2306652 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO RGD PMID:18314883 RGD:2303377 NCBI chrNW_004936471:33,704,616...33,709,455
Ensembl chrNW_004936471:33,703,792...33,709,484 		JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:16968543 RGD:1626367 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G LOC101977100 alcohol dehydrogenase class-3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,795,214...3,810,732
Ensembl chrNW_004936520:3,795,156...3,810,304 		JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104 		JBrowse link
G Loxl1 lysyl oxidase like 1 ISO RGD PMID:19218354 RGD:7394732 NCBI chrNW_004936471:33,075,542...33,099,877
Ensembl chrNW_004936471:33,075,461...33,099,910 		JBrowse link
G Lta lymphotoxin alpha ISO RGD PMID:12849708 RGD:1625037 NCBI chrNW_004936727:1,940,081...1,941,022
Ensembl chrNW_004936727:1,940,081...1,941,022 		JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:15619010 RGD:2316620 NCBI chrNW_004936739:975,494...978,426
Ensembl chrNW_004936739:975,493...978,482 		JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within
involved_in		 ISO (PMID:12594207)
(PMID:14607928)		 MGI
ComplexPortal		 PMID:12594207 PMID:14607928 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Maob monoamine oxidase B ISO RGD PMID:19779138 RGD:2316301 NCBI chrNW_004936502:9,907,181...10,014,756
Ensembl chrNW_004936502:9,907,180...10,014,773 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213 		JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,130,421...2,159,859
Ensembl chrNW_004936529:2,130,252...2,160,313 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin ISO RGD PMID:16574623 RGD:7349342 NCBI chrNW_004936694:970,706...980,605 JBrowse link
G Mgst1 microsomal glutathione S-transferase 1 ISO RGD PMID:18634816 RGD:2302282 NCBI chrNW_004936587:1,270,030...1,287,130
Ensembl chrNW_004936587:1,269,184...1,287,150 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 ISO RGD PMID:18461660 RGD:2302283 NCBI chrNW_004936535:7,995,185...8,015,463
Ensembl chrNW_004936535:7,995,248...8,015,463 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:14980085 RGD:1641998 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17452115 RGD:1642037 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793 		JBrowse link
G Mpo myeloperoxidase ISO RGD PMID:15788232 RGD:2317972 NCBI chrNW_004936490:4,809,773...4,819,070
Ensembl chrNW_004936490:4,809,631...4,819,070 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO RGD PMID:17417665 RGD:2324678 NCBI chrNW_004936816:60,499...91,628
Ensembl chrNW_004936816:60,499...91,628 		JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming ISO RGD PMID:19064121 RGD:2324961 NCBI chrNW_004936816:129,926...159,396 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135)
(PMID:10607756), (PMID:12719478), (PMID:12855817), (PMID:12872135)		 Ensembl
MGI		 PMID:10607756 PMID:12719478 PMID:12855817 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29624734) Ensembl
MGI		 PMID:29624734 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Ncf2 neutrophil cytosolic factor 2 ISO RGD PMID:17448908 RGD:2314442 NCBI chrNW_004936481:6,300,894...6,325,878
Ensembl chrNW_004936481:6,301,012...6,324,787 		JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 ISO RGD PMID:12770614 RGD:2293782 NCBI chrNW_004936600:3,465,016...3,471,258
Ensembl chrNW_004936600:3,465,162...3,471,205 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Ngf nerve growth factor ISO RGD PMID:19012240 RGD:2303803 NCBI chrNW_004936627:635,784...641,290
Ensembl chrNW_004936627:635,788...645,364 		JBrowse link
G Ngfr nerve growth factor receptor ISO RGD PMID:21084570 RGD:5144146 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263 		JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO RGD PMID:16627577 RGD:1600142 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 acts_upstream_of_or_within ISO (PMID:22863753) MGI PMID:22863753 NCBI chrNW_004936694:757,121...773,924 JBrowse link
G Noct nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:8,504,518...8,509,376
Ensembl chrNW_004936535:8,505,834...8,507,928 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14560001)
(PMID:15692051)		 Ensembl
MGI		 PMID:14560001 PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:20724006 RGD:5131926 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9686345 GO_REF:0000107 RGD:4139908 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:18031380 RGD:2292116 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:18449946 RGD:2325312 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:22224641 RGD:5685643 NCBI chrNW_004936474:683,325...684,662
Ensembl chrNW_004936474:683,325...684,665 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,771,384...19,785,034
Ensembl chrNW_004936475:19,769,488...19,785,311 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:12492453 RGD:1625206 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:8821744 RGD:14700868 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423 		JBrowse link
G Nrf1 nuclear respiratory factor 1 ISO RGD PMID:18062988 RGD:2302402 NCBI chrNW_004936579:5,424,049...5,560,355
Ensembl chrNW_004936579:5,423,773...5,561,003 		JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:17553897 RGD:2316609 NCBI chrNW_004936489:6,506,207...6,567,136
Ensembl chrNW_004936489:6,506,207...6,548,946 		JBrowse link
G Otud5 OTU deubiquitinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:847,360...876,912
Ensembl chrNW_004936721:848,324...877,068 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12055263)
(PMID:15240711)
(PMID:17448897)		 Ensembl
MGI		 PMID:12055263 PMID:15240711 PMID:17448897 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Palm3 paralemmin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936659:2,720,609...2,729,221
Ensembl chrNW_004936659:2,719,674...2,725,635 		JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:17136598 RGD:9835397 NCBI chrNW_004936698:650,225...746,593
Ensembl chrNW_004936698:650,953...747,057 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:19268478 RGD:10427879 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:19268478 RGD:10427879 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:10630414 RGD:2308911 NCBI chrNW_004936523:7,009,966...7,050,300
Ensembl chrNW_004936523:7,010,068...7,050,468 		JBrowse link
G Pde5a phosphodiesterase 5A ISO RGD PMID:17141339 RGD:2314470 NCBI chrNW_004936869:24,265...117,120
Ensembl chrNW_004936869:39,122...117,127 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19734906) Ensembl
MGI		 PMID:19734906 GO_REF:0000107 NCBI chrNW_004936491:8,985,074...9,040,863
Ensembl chrNW_004936491:8,985,074...9,041,244 		JBrowse link
G Penk proenkephalin ISO RGD PMID:8784263 RGD:10003024 NCBI chrNW_004936496:3,016,247...3,021,726
Ensembl chrNW_004936496:3,016,218...3,021,738 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:17093905 RGD:1642448 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9013981) Ensembl
MGI		 PMID:9013981 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Pon1 paraoxonase 1 ISO RGD PMID:29174038 RGD:153350090 NCBI chrNW_004936585:4,954,871...4,979,560
Ensembl chrNW_004936585:4,954,869...4,979,591 		JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:17325201) MGI PMID:17325201 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G Prdx3 peroxiredoxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17316558) Ensembl
MGI		 PMID:17316558 GO_REF:0000107 NCBI chrNW_004936486:8,597,479...8,606,727
Ensembl chrNW_004936486:8,597,388...8,606,780 		JBrowse link
G Prl prolactin ISO RGD PMID:17706967 RGD:1642565 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Pros1 protein S ISO RGD PMID:16879219 RGD:2300012 NCBI chrNW_004936666:18,303...110,357
Ensembl chrNW_004936666:19,387...110,014 		JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9013981) RGD
MGI
Ensembl		 PMID:9013981 PMID:9065783 GO_REF:0000107 RGD:9999198 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Ptger1 prostaglandin E receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936659:3,014,633...3,018,617
Ensembl chrNW_004936659:3,012,012...3,018,275 		JBrowse link
G Ptger2 prostaglandin E receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936697:2,440,943...2,453,897
Ensembl chrNW_004936697:2,440,901...2,453,975 		JBrowse link
G Ptger3 prostaglandin E receptor 3 acts_upstream_of_or_within ISO (PMID:15834430) MGI PMID:15834430 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
G Ptges prostaglandin E synthase ISO RGD PMID:18383341 RGD:2300090 NCBI chrNW_004936487:16,959,263...16,968,909
Ensembl chrNW_004936487:16,959,231...16,968,922 		JBrowse link
G Ptgfr prostaglandin F receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936571:5,235,678...5,274,417
Ensembl chrNW_004936571:5,235,687...5,274,432 		JBrowse link
G Ptgir prostaglandin I2 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936664:487,069...489,328
Ensembl chrNW_004936664:487,125...489,414 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:17766482 RGD:1642599 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23871208) UniProt PMID:23871208 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO RGD PMID:17915214 RGD:2298850 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Ren renin ISO RGD PMID:22342485 RGD:6892689 NCBI chrNW_004936567:598,044...607,628
Ensembl chrNW_004936567:598,048...607,497 		JBrowse link
G Rpl13a ribosomal protein L13a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23460747) Ensembl
MGI		 PMID:23460747 GO_REF:0000107 NCBI chrNW_004936664:3,352,535...3,356,196
Ensembl chrNW_004936664:3,352,514...3,356,895 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:3,897,878...4,005,664
Ensembl chrNW_004936624:3,897,791...4,000,558 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO RGD PMID:15389631 RGD:1643035 NCBI chrNW_004936490:3,441,046...3,492,917
Ensembl chrNW_004936490:3,441,055...3,492,917 		JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:3,414,315...3,416,335
Ensembl chrNW_004936580:3,414,296...3,416,393 		JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:17207109 GO_REF:0000118 RGD:2316908 NCBI chrNW_004936580:3,256,399...3,256,913
Ensembl chrNW_004936580:3,256,417...3,256,913 		JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:17207109 GO_REF:0000118 RGD:2316908 NCBI chrNW_004936580:3,228,097...3,230,652
Ensembl chrNW_004936580:3,228,092...3,230,676 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 ISO RGD PMID:18420837 RGD:5143982 NCBI chrNW_004936581:798,738...801,614
Ensembl chrNW_004936581:798,739...801,633 		JBrowse link
G Selp selectin P ISO RGD PMID:7520013 RGD:729708 NCBI chrNW_004936481:17,076,660...17,112,501
Ensembl chrNW_004936481:17,076,536...17,107,963 		JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:9569197 RGD:8547847 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:11000512 PMID:27338059 RGD:151667427 RGD:4144154 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466 		JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:11000512 RGD:4144154 NCBI chrNW_004936555:5,966,610...5,982,083
Ensembl chrNW_004936555:5,979,417...5,982,011 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10678911)
(PMID:17620357)
(PMID:9261342)
(PMID:18984740)		 MGI
TreeGrafter
Ensembl		 PMID:9261342 PMID:10678911 PMID:17620357 PMID:18984740 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Slco1b3 solute carrier organic anion transporter family member 1B3 ISO RGD PMID:18310902 RGD:2303092 NCBI chrNW_004936548:5,593,908...5,682,187 JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:18424750 RGD:2298910 NCBI chrNW_004936530:9,312,965...9,315,593
Ensembl chrNW_004936530:9,312,965...9,316,165 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:18424750 RGD:2298910 NCBI chrNW_004936594:2,932,297...2,935,358
Ensembl chrNW_004936594:2,933,747...2,934,451 		JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:17804075 RGD:2317399 NCBI chrNW_004936489:11,178,338...11,191,601
Ensembl chrNW_004936489:11,178,015...11,191,781 		JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:10703670 RGD:2300026 NCBI chrNW_004936515:11,026,156...11,046,812
Ensembl chrNW_004936515:11,025,724...11,046,849 		JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
G Srr serine racemase involved_in ISO (PMID:15681805) UniProt PMID:15681805 NCBI chrNW_004936538:8,362,033...8,383,820 JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756 		JBrowse link
G Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:2,371,953...2,421,882
Ensembl chrNW_004936489:2,372,216...2,424,515 		JBrowse link
G Tac1 tachykinin precursor 1 ISO RGD PMID:18337316 RGD:2304320 NCBI chrNW_004936585:2,932,783...2,941,141
Ensembl chrNW_004936585:2,932,727...2,941,384 		JBrowse link
G Tbxa2r thromboxane A2 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15834430) Ensembl
MGI		 PMID:15834430 GO_REF:0000107 NCBI chrNW_004936588:2,040,712...2,044,635
Ensembl chrNW_004936588:2,040,630...2,045,110 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:16428437) MGI PMID:16428437 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO RGD PMID:11688998 RGD:5133263 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
G Tfpi tissue factor pathway inhibitor ISO RGD PMID:9426395 RGD:11060265 NCBI chrNW_004936506:10,103,120...10,172,800
Ensembl chrNW_004936506:10,103,139...10,171,863 		JBrowse link
G Tg thyroglobulin ISO RGD PMID:16627577 RGD:1600142 NCBI chrNW_004936470:16,185,557...16,396,172 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:21239462 RGD:5128710 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
G Thbd thrombomodulin ISO RGD PMID:12611420 RGD:1601652 NCBI chrNW_004936620:2,563,900...2,568,117 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12855817)
(PMID:12872135)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:16880766 RGD:2290456 NCBI chrNW_004936602:1,488,993...1,496,108
Ensembl chrNW_004936602:1,489,545...1,495,478 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tjp1 tight junction protein 1 ISO RGD PMID:17515855 RGD:2325148 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946 		JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:11028557 RGD:2312734 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 E. coli K12 LPS
(PMID:12055258)
(PMID:10549626), (PMID:10607756)
(PMID:11489994)
(PMID:10229796)
(PMID:12594207)		 RGD
MGI
Ensembl		 PMID:10229796 PMID:10549626 PMID:10607756 PMID:11489994 PMID:12055258 More... GO_REF:0000107 RGD:1620770 RGD:1643119 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO PMID:25158758 RGD
UniProt		 PMID:11096136 PMID:25158758 RGD:10054077 RGD:8548521 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO RGD PMID:15509749 RGD:1624192 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO RGD PMID:21195213 RGD:5130879 NCBI chrNW_004936474:908,414...935,765
Ensembl chrNW_004936474:908,485...934,177 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:22,401,713...22,408,808
Ensembl chrNW_004936470:22,401,379...22,409,490 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937097:23,695...31,673
Ensembl chrNW_004937097:24,911...31,681 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 NOT|involved_in ISO (MGI:5440106|PMID:23021218) UniProt PMID:23021218 MGI:5440106 NCBI chrNW_004936769:1,424,526...1,447,547
Ensembl chrNW_004936769:1,424,549...1,447,516 		JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3356692) Ensembl
MGI		 PMID:3356692 GO_REF:0000107 NCBI chrNW_004936501:5,833,391...5,846,021
Ensembl chrNW_004936501:5,833,391...5,846,164 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:22433071 RGD:7207795 NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
G Wdr35 WD repeat domain 35 ISO RGD PMID:24803807 RGD:11553919 NCBI chrNW_004936493:11,374,681...11,435,792
Ensembl chrNW_004936493:11,374,671...11,436,233 		JBrowse link
G Wdr83 WD repeat domain 83 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29402223) Ensembl
MGI		 PMID:29402223 GO_REF:0000107 NCBI chrNW_004936659:1,796,030...1,803,714
Ensembl chrNW_004936659:1,796,067...1,803,683 		JBrowse link
G Xdh xanthine dehydrogenase ISO RGD PMID:24378112 RGD:13210508 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116 		JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741 		JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chrNW_004936636:292,631...341,999
Ensembl chrNW_004936636:292,709...340,393 		JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8806812) Ensembl
MGI		 PMID:8806812 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:2,301,470...2,388,533
Ensembl chrNW_004936710:2,301,730...2,387,695 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chrNW_004936669:3,449,259...3,478,471
Ensembl chrNW_004936669:3,456,494...3,478,512 		JBrowse link
G Aicda activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567) Ensembl
MGI		 PMID:18762567 GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601 		JBrowse link
G Aif1 allograft inflammatory factor 1 ISO RGD PMID:18717813 RGD:2313015 NCBI chrNW_004936727:1,907,493...1,909,350
Ensembl chrNW_004936727:1,907,505...1,909,338 		JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,123,988...5,142,326
Ensembl chrNW_004936596:5,124,083...5,142,027 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:3,502,844...3,510,919
Ensembl chrNW_004936601:3,502,844...3,511,003 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004936495:11,004,296...11,045,467
Ensembl chrNW_004936495:11,004,176...11,045,472 		JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:539,150...545,021
Ensembl chrNW_004936744:537,168...546,017 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chrNW_004936487:17,482,307...17,527,407
Ensembl chrNW_004936487:17,486,826...17,527,435 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7889565) Ensembl
MGI		 PMID:7889565 GO_REF:0000107 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315 		JBrowse link
G Bysl bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,051,636...2,061,651
Ensembl chrNW_004936588:2,052,425...2,061,641 		JBrowse link
G Capn2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Casp7 caspase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:4,082,664...4,114,942
Ensembl chrNW_004936486:4,088,372...4,114,955 		JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004936525:8,238,128...8,240,974
Ensembl chrNW_004936525:8,237,831...8,240,974 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chrNW_004936490:253,279...259,947
Ensembl chrNW_004936490:253,034...259,965 		JBrowse link
G Cd14 CD14 molecule involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:12594207) RGD
TreeGrafter
Ensembl
MGI		 PMID:12594207 PMID:22511970 GO_REF:0000107 GO_REF:0000118 RGD:7183752 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10880523) Ensembl
MGI
TreeGrafter		 PMID:10880523 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:2,105,179...2,119,137
Ensembl chrNW_004936480:2,105,084...2,119,739 		JBrowse link
G Cd274 CD274 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936539:132,870...145,288
Ensembl chrNW_004936539:132,868...143,602 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696) Ensembl
MGI		 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280 		JBrowse link
G Cd68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004936595:858,289...861,131 JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chrNW_004936536:6,462,080...6,483,450 JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19047410) RGD
MGI
TreeGrafter		 PMID:19047410 PMID:21039614 GO_REF:0000118 RGD:4892198 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Cdc73 cell division cycle 73 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,365,457...1,482,497
Ensembl chrNW_004936638:1,365,648...1,483,277 		JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chrNW_004936564:6,443,041...6,584,767
Ensembl chrNW_004936564:6,442,809...6,567,210 		JBrowse link
G Cdk4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (PMID:8543804) MGI PMID:8543804 NCBI chrNW_004936646:1,886,262...1,889,260 JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chrNW_004936722:1,207,718...1,209,482
Ensembl chrNW_004936722:1,207,743...1,209,482 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004936524:1,804,643...1,820,491 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7751651) Ensembl
MGI		 PMID:7751651 GO_REF:0000107 NCBI chrNW_004936532:3,896,654...3,908,184
Ensembl chrNW_004936532:3,895,755...3,908,367 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chrNW_004936483:17,216,288...17,296,430
Ensembl chrNW_004936483:17,216,213...17,294,534 		JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) MGI PMID:19828624 NCBI chrNW_004936557:5,246,770...5,256,608 JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chrNW_004936647:3,081,896...3,083,864
Ensembl chrNW_004936647:3,081,896...3,083,864 		JBrowse link
G Csf3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chrNW_004936490:15,142,526...15,146,375
Ensembl chrNW_004936490:15,142,808...15,144,487 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10422773 GO_REF:0000107 RGD:4892028 NCBI chrNW_004936473:28,508,726...28,535,640
Ensembl chrNW_004936473:28,510,523...28,535,627 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chrNW_004936676:60,869...63,028
Ensembl chrNW_004936676:60,621...63,106 		JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chrNW_004936677:3,157,173...3,162,599
Ensembl chrNW_004936677:3,157,144...3,163,210 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Ednrb endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434 		JBrowse link
G Efnb2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004936472:5,138,751...5,181,630
Ensembl chrNW_004936472:5,138,745...5,181,668 		JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004936669:901,192...906,765
Ensembl chrNW_004936669:901,104...906,782 		JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856 		JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Esr2 estrogen receptor 2 ISO negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chrNW_004936586:1,708,803...1,773,372
Ensembl chrNW_004936586:1,708,684...1,773,383 		JBrowse link
G Fubp1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chrNW_004936571:4,729,135...4,760,943
Ensembl chrNW_004936571:4,732,581...4,760,942 		JBrowse link
G Gata1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chrNW_004936694:2,051,362...2,053,812
Ensembl chrNW_004936694:2,051,325...2,053,818 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:6,610,565...6,618,509
Ensembl chrNW_004936537:6,610,565...6,618,450 		JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chrNW_004936593:268,736...273,623
Ensembl chrNW_004936593:268,350...277,229 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,684,660...5,694,779
Ensembl chrNW_004936538:5,684,644...5,695,043 		JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chrNW_004936597:1,706,671...1,722,370
Ensembl chrNW_004936597:1,706,665...1,722,370 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chrNW_004936599:2,197,681...2,200,642
Ensembl chrNW_004936599:2,197,634...2,201,050 		JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:6,139,717...6,182,792
Ensembl chrNW_004936493:6,137,970...6,182,792 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) UniProt PMID:25337993 MGI:5705210 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chrNW_004936541:561,721...598,915
Ensembl chrNW_004936541:558,414...599,195 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,536,664...4,539,331
Ensembl chrNW_004936516:4,534,306...4,539,387 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004936627:4,451,847...4,473,163
Ensembl chrNW_004936627:4,451,823...4,473,223 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chrNW_004936588:5,241,276...5,283,952
Ensembl chrNW_004936588:5,222,509...5,239,890
Ensembl chrNW_004936588:5,222,509...5,239,890 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:18412159 RGD:401854236 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) MGI PMID:18791161 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19047410), (PMID:21609717) Ensembl
MGI		 PMID:19047410 PMID:21609717 GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chrNW_004936519:6,166,060...6,180,652
Ensembl chrNW_004936519:6,175,261...6,180,396 		JBrowse link
G Il12b interleukin 12B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219), (PMID:21606371) Ensembl
MGI		 PMID:18025219 PMID:21606371 GO_REF:0000107 NCBI chrNW_004936515:4,056,214...4,066,121
Ensembl chrNW_004936515:4,056,214...4,065,076 		JBrowse link
G Il18 interleukin 18 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11739527 GO_REF:0000118 RGD:729357 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189 		JBrowse link
G Il1a interleukin 1 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:23200736 GO_REF:0000118 RGD:7175528 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,414,359...1,416,715
Ensembl chrNW_004936783:1,414,359...1,416,715 		JBrowse link
G Il24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chrNW_004936557:5,719,592...5,727,113
Ensembl chrNW_004936557:5,719,592...5,727,113 		JBrowse link
G Il36a interleukin 36 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,369,454...1,371,458
Ensembl chrNW_004936783:1,369,537...1,371,458 		JBrowse link
G Il36g interleukin 36 gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,355,562...1,359,524
Ensembl chrNW_004936783:1,354,955...1,360,519 		JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,396,720...1,404,416
Ensembl chrNW_004936783:1,401,482...1,404,416 		JBrowse link
G Il37 interleukin 37 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:1,307,560...1,312,355
Ensembl chrNW_004936783:1,307,560...1,312,355 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:19047410), (PMID:21606371)
(PMID:23776175)		 RGD
MGI		 PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 RGD:11049548 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936602:3,073,910...3,129,344
Ensembl chrNW_004936602:3,073,889...3,129,408 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9348310) Ensembl
MGI		 PMID:9348310 GO_REF:0000107 NCBI chrNW_004936641:2,608,109...2,622,446
Ensembl chrNW_004936641:2,608,100...2,622,409 		JBrowse link
G Jak2 Janus kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chrNW_004936503:111,722...243,627
Ensembl chrNW_004936503:110,963...241,867 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chrNW_004936526:8,877,085...8,928,280
Ensembl chrNW_004936526:8,877,434...8,919,548 		JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12594207) MGI
Ensembl		 PMID:12594207 GO_REF:0000107 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221 		JBrowse link
G Ldoc1 LDOC1 regulator of NFKB signaling involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:6,481,758...6,486,018
Ensembl chrNW_004936513:6,485,442...6,485,882 		JBrowse link
G Litaf lipopolysaccharide induced TNF factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16954198) Ensembl
MGI		 PMID:16954198 GO_REF:0000107 NCBI chrNW_004936530:9,409,378...9,421,974
Ensembl chrNW_004936530:9,409,692...9,421,974 		JBrowse link
G LOC101954938 C-X-C motif chemokine 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,729,263...1,729,840
Ensembl chrNW_004936598:1,728,861...1,729,843 		JBrowse link
G LOC101955076 low affinity immunoglobulin gamma Fc region receptor III-A ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004937131:42,523...49,533 JBrowse link
G LOC101959956 cathepsin G-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:34,410...37,097
Ensembl chrNW_004936722:34,392...37,097 		JBrowse link
G LOC101961426 guanylate-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936991:83,446...95,310
Ensembl chrNW_004936991:83,465...95,416 		JBrowse link
G LOC101964975 interleukin-8 involved_in ISO
IEA		 RGD
Ensembl		 PMID:31442273 GO_REF:0000107 RGD:150540302 NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353 		JBrowse link
G LOC101965069 C-C chemokine receptor type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:294,189...297,321
Ensembl chrNW_004936596:295,811...296,866 		JBrowse link
G LOC101970767 steroid 17-alpha-hydroxylase/17,20 lyase ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936600:3,097,620...3,102,713
Ensembl chrNW_004936600:3,097,638...3,102,713 		JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G LOC101973872 bcl-2-like protein 2 involved_in ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chrNW_004936722:1,039,970...1,044,942
Ensembl chrNW_004936722:1,053,326...1,059,477
Ensembl chrNW_004936722:1,053,326...1,059,477 		JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936471:33,367,810...33,380,764
Ensembl chrNW_004936471:33,367,810...33,380,764 		JBrowse link
G LOC101976242 NKG2-D type II integral membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936902:216,495...229,150
Ensembl chrNW_004936902:216,495...229,141 		JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chrNW_004936739:975,494...978,426
Ensembl chrNW_004936739:975,493...978,482 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266 		JBrowse link
G Map2k3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chrNW_004936741:362,682...386,633
Ensembl chrNW_004936741:362,387...386,678 		JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,882,191...4,891,807
Ensembl chrNW_004936588:4,882,184...4,892,071 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,228,950...5,238,948
Ensembl chrNW_004936551:5,228,950...5,238,948 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793 		JBrowse link
G Mrc1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22832163) Ensembl
MGI		 PMID:22832163 GO_REF:0000107 NCBI chrNW_004936520:9,463,007...9,547,321
Ensembl chrNW_004936520:9,463,007...9,547,257 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:23776175) RGD
Ensembl
MGI		 PMID:16842873 PMID:23776175 GO_REF:0000107 RGD:10045666 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435 		JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20060382) Ensembl
MGI
TreeGrafter		 PMID:20060382 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:1,850,185...1,857,757
Ensembl chrNW_004936661:1,850,058...1,862,035 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,950,356...1,963,847
Ensembl chrNW_004936727:1,950,057...1,963,245 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:709,693...732,119
Ensembl chrNW_004936864:709,709...731,718 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18025219), (PMID:18791161) RGD
MGI
Ensembl		 PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 RGD:5508737 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:885,015...931,657
Ensembl chrNW_004936675:885,039...920,253 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chrNW_004936496:280,593...305,900
Ensembl chrNW_004936496:280,558...305,904 		JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chrNW_004936498:2,432,436...2,444,495
Ensembl chrNW_004936498:2,432,448...2,444,354 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,236,121...2,241,086
Ensembl chrNW_004936661:2,232,484...2,241,629 		JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936539:190,583...229,936
Ensembl chrNW_004936539:190,637...234,873 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,684,167...1,705,387
Ensembl chrNW_004936486:1,684,135...1,705,715 		JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chrNW_004936498:1,856,256...1,944,405
Ensembl chrNW_004936498:1,856,144...1,944,412 		JBrowse link
G Pde4b phosphodiesterase 4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15585880) Ensembl
MGI		 PMID:15585880 GO_REF:0000107 NCBI chrNW_004936591:5,152,491...5,666,728
Ensembl chrNW_004936591:5,152,441...5,573,129 		JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO (PMID:15585880) MGI PMID:15585880 NCBI chrNW_004936480:8,123,437...9,235,586
Ensembl chrNW_004936480:8,204,701...9,234,865 		JBrowse link
G Plaa phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,665,294...2,698,372
Ensembl chrNW_004936611:2,665,370...2,700,538 		JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chrNW_004936521:5,238,128...5,243,829
Ensembl chrNW_004936521:5,238,093...5,243,877 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:674,754...679,979
Ensembl chrNW_004936595:672,642...679,622 		JBrowse link
G Plscr4 phospholipid scramblase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:8,977,763...9,022,761
Ensembl chrNW_004936519:8,977,623...9,024,524 		JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chrNW_004936476:23,799,285...23,886,606
Ensembl chrNW_004936476:23,811,641...23,828,176 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:4,285,770...4,428,213
Ensembl chrNW_004936490:4,287,309...4,428,504 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chrNW_004936538:7,780,022...7,814,575
Ensembl chrNW_004936538:7,780,022...7,814,575 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18769055 RGD:2300271 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rara retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9918814 PMID:15728586 GO_REF:0000107 GO_REF:0000118 RGD:1580656 RGD:2298880 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Rhoa ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098)
(PMID:11894097)		 Ensembl
MGI		 PMID:11894097 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:509,244...556,424
Ensembl chrNW_004936588:505,948...541,831 		JBrowse link
G Selenos selenoprotein S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:2,589,773...2,600,837
Ensembl chrNW_004936483:2,589,828...2,599,987 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20060032 GO_REF:0000107 RGD:13208812 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Sgms1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chrNW_004936735:1,702,754...1,984,141
Ensembl chrNW_004936735:1,943,352...1,984,141 		JBrowse link
G Shpk sedoheptulokinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936677:314,328...342,892
Ensembl chrNW_004936677:314,294...342,855 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) MGI PMID:31786261 NCBI chrNW_004936504:1,378,812...1,465,463
Ensembl chrNW_004936504:1,378,810...1,465,623 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chrNW_004936530:9,312,965...9,315,593
Ensembl chrNW_004936530:9,312,965...9,316,165 		JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:877,241...908,697
Ensembl chrNW_004936582:877,474...913,770 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004936710:1,523,289...1,530,181
Ensembl chrNW_004936710:1,523,355...1,529,672 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756 		JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chrNW_004936588:2,040,712...2,044,635
Ensembl chrNW_004936588:2,040,630...2,045,110 		JBrowse link
G Tfpi tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chrNW_004936506:10,103,120...10,172,800
Ensembl chrNW_004936506:10,103,139...10,171,863 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523), (PMID:24740015)
(PMID:14691481)		 RGD
MGI
Ensembl		 PMID:10880523 PMID:14691481 PMID:20438866 PMID:24740015 GO_REF:0000107 RGD:7777075 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tlr5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chrNW_004936526:383,490...387,007
Ensembl chrNW_004936526:383,418...401,552 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19047410), (PMID:20060382), (PMID:21606371) RGD
MGI
Ensembl		 PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... GO_REF:0000107 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:908,414...935,765
Ensembl chrNW_004936474:908,485...934,177 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) BHF-UCL PMID:20844189 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:3,914,887...3,959,698
Ensembl chrNW_004936647:3,914,887...3,959,672 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:20,810,188...20,841,537
Ensembl chrNW_004936477:20,834,849...20,841,535 		JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:26383906 RGD:127284850 NCBI chrNW_004936476:18,577,825...18,583,675
Ensembl chrNW_004936476:18,574,381...18,583,647 		JBrowse link
G Trim41 tripartite motif containing 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936826:734,306...747,047
Ensembl chrNW_004936826:734,493...747,047 		JBrowse link
G Tspo translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chrNW_004936718:992,301...995,172
Ensembl chrNW_004936718:992,301...995,995 		JBrowse link
G Vim vimentin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chrNW_004936709:1,578,137...1,741,877
Ensembl chrNW_004936709:1,579,096...1,741,754 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,251,148...2,253,527
Ensembl chrNW_004936661:2,250,665...2,253,787 		JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101964473 caspase-4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,242,381...3,269,821 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (PMID:19252480) UniProt PMID:19252480 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24740015) Ensembl
MGI		 PMID:24740015 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936561:3,043,520...3,069,680
Ensembl chrNW_004936561:3,043,578...3,069,689 		JBrowse link
G Cd14 CD14 molecule involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chrNW_004936480:2,105,179...2,119,137
Ensembl chrNW_004936480:2,105,084...2,119,739 		JBrowse link
G Cd6 CD6 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,932,596...1,943,671
Ensembl chrNW_004936581:1,932,668...1,969,126 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549626), (PMID:12855817) Ensembl
MGI		 PMID:10549626 PMID:12855817 GO_REF:0000107 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082713) Ensembl
MGI		 PMID:15082713 GO_REF:0000107 NCBI chrNW_004936602:3,073,910...3,129,344
Ensembl chrNW_004936602:3,073,889...3,129,408 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817), (PMID:12872135) Ensembl
MGI		 PMID:12855817 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Ly86 lymphocyte antigen 86 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chrNW_004936534:5,848,110...5,908,082
Ensembl chrNW_004936534:5,848,100...5,908,114 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in
acts_upstream_of		 ISO (MGI:5645195|PMID:24380872)
(PMID:10880523)		 UniProt
MGI		 PMID:10880523 PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180 		JBrowse link
G Mtdh metadherin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:45,016,099...45,079,709
Ensembl chrNW_004936470:45,016,099...45,079,710 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817) Ensembl
MGI		 PMID:12855817 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135), (PMID:18261938) Ensembl
MGI		 PMID:12872135 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15647265) Ensembl
MGI		 PMID:15647265 GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2 group C member 2 acts_upstream_of_or_within ISO (PMID:9851930) MGI PMID:9851930 NCBI chrNW_004936602:491,821...557,790
Ensembl chrNW_004936602:504,652...553,936 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Prkce protein kinase C epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11696589) Ensembl
MGI		 PMID:11696589 GO_REF:0000107 NCBI chrNW_004936508:6,018,374...6,495,216
Ensembl chrNW_004936508:6,017,551...6,494,427 		JBrowse link
G Ptafr platelet activating factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936474:12,333,905...12,337,140
Ensembl chrNW_004936474:12,336,071...12,337,099 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6459415|PMID:30718772) ARUK-UCL PMID:30718772 MGI:6459415 NCBI chrNW_004936562:1,852,759...1,870,647
Ensembl chrNW_004936562:1,852,740...1,870,472 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12872135)
(PMID:12855817)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tifab TIFA inhibitor acts_upstream_of_or_within ISO (PMID:26458771) MGI PMID:26458771 NCBI chrNW_004936597:2,620,661...2,621,302 JBrowse link
G Tlr4 toll like receptor 4 NOT|acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523) MGI
Ensembl		 PMID:10880523 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26458771) Ensembl
MGI
TreeGrafter		 PMID:26458771 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,051,636...2,061,651
Ensembl chrNW_004936588:2,052,425...2,061,641 		JBrowse link
G Defb114 defensin beta 114 involved_in ISO (PMID:23482568) UniProt PMID:23482568 NCBI chrNW_004936476:10,651,162...10,657,785 JBrowse link
G Ltf lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:344,287...373,788
Ensembl chrNW_004936596:344,274...373,952 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,950,356...1,963,847
Ensembl chrNW_004936727:1,950,057...1,963,245 		JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:17325201) MGI PMID:17325201 NCBI chrNW_004936659:1,894,423...1,897,690 JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:22,401,713...22,408,808
Ensembl chrNW_004936470:22,401,379...22,409,490 		JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023 		JBrowse link
G Cd14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523) MGI
TreeGrafter
Ensembl		 PMID:10880523 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:2,105,179...2,119,137
Ensembl chrNW_004936480:2,105,084...2,119,739 		JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523) MGI
TreeGrafter
Ensembl		 PMID:10880523 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936534:5,848,110...5,908,082
Ensembl chrNW_004936534:5,848,100...5,908,114 		JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Mif macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442 		JBrowse link
G Prkca protein kinase C alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052 		JBrowse link
G Sash1 SAM and SH3 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chrNW_004936489:1,569,143...1,740,398
Ensembl chrNW_004936489:1,447,885...1,740,400 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) UniProt PMID:12731067 NCBI chrNW_004936557:5,344,373...5,364,234 JBrowse link
G Cd84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) UniProt PMID:20628063 MGI:5700297 NCBI chrNW_004936740:111,296...133,847
Ensembl chrNW_004936740:123,885...134,097 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,443,851...9,454,715
Ensembl chrNW_004936475:9,443,733...9,455,062 		JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) MGI PMID:16643855 NCBI chrNW_004936522:8,468,092...8,560,453
Ensembl chrNW_004936522:8,469,443...8,560,447 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15975
    response to stimulus 8557
      response to chemical 4656
        response to oxygen-containing compound 2086
          response to lipopolysaccharide 429
            cellular response to lipopolysaccharide + 232
            detection of lipopolysaccharide 6
Path 2
Term Annotations click to browse term
  biological_process 15975
    response to stimulus 8557
      response to external stimulus 2249
        response to external biotic stimulus 1408
          response to other organism 1404
            response to bacterium 735
              response to molecule of bacterial origin 444
                response to lipopolysaccharide 429
                  cellular response to lipopolysaccharide + 232
                  detection of lipopolysaccharide 6
paths to the root