Tfpi (tissue factor pathway inhibitor) - Rat Genome Database

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Gene: Tfpi (tissue factor pathway inhibitor) Ictidomys tridecemlineatus
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Symbol: Tfpi
Name: tissue factor pathway inhibitor
RGD ID: 12716378
Description: ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (inferred); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); response to estradiol (ortholog); PARTICIPATES IN coagulation cascade pathway; syndecan signaling pathway; ASSOCIATED WITH Airway Obstruction (ortholog); atrial fibrillation (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: tissue factor pathway inhibitor, transcript variant X1; tissue factor pathway inhibitor, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303146,663,997 - 146,734,969 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650610,103,139 - 10,171,863 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650610,103,120 - 10,172,800 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tfpi
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303146,663,997 - 146,734,969 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650610,103,139 - 10,171,863 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650610,103,120 - 10,172,800 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TFPI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382187,464,230 - 187,554,435 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2187,464,230 - 187,565,760 (-)EnsemblGRCh38hg38GRCh38
GRCh372188,328,957 - 188,419,162 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362188,037,202 - 188,127,464 (-)NCBINCBI36Build 36hg18NCBI36
Build 342188,156,790 - 188,244,556NCBI
Celera2181,925,068 - 182,015,356 (-)NCBICelera
Cytogenetic Map2q32.1NCBI
HuRef2180,188,532 - 180,278,959 (-)NCBIHuRef
CHM1_12188,334,627 - 188,424,881 (-)NCBICHM1_1
T2T-CHM13v2.02187,953,180 - 188,043,364 (-)NCBIT2T-CHM13v2.0
Tfpi
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39284,263,199 - 84,307,119 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl284,263,199 - 84,307,119 (-)EnsemblGRCm39 Ensembl
GRCm38284,432,855 - 84,476,775 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl284,432,855 - 84,476,775 (-)EnsemblGRCm38mm10GRCm38
MGSCv37284,273,017 - 84,316,932 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36284,233,699 - 84,275,013 (-)NCBIMGSCv36mm8
Celera286,041,007 - 86,084,914 (-)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.41NCBI
Tfpi
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8389,939,862 - 89,989,253 (-)NCBIGRCr8
mRatBN7.2369,533,156 - 69,582,547 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl369,533,156 - 69,576,880 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx372,915,327 - 72,959,162 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,513,992 - 81,557,826 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,267,881 - 79,311,569 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0371,852,738 - 71,902,127 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl371,852,744 - 71,893,618 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0378,373,808 - 78,423,115 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4367,654,389 - 67,697,178 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1367,550,760 - 67,593,550 (-)NCBI
Celera368,890,124 - 68,933,788 (-)NCBICelera
Cytogenetic Map3q24NCBI
Tfpi
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540310,924,893 - 11,004,284 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540310,925,155 - 11,004,229 (+)NCBIChiLan1.0ChiLan1.0
TFPI
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21390,129,678 - 90,219,981 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B90,144,776 - 90,234,979 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B74,744,154 - 74,834,338 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B192,541,881 - 192,631,867 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B192,541,881 - 192,581,384 (-)Ensemblpanpan1.1panPan2
TFPI
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13629,457,131 - 29,546,455 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3629,459,371 - 29,511,310 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3629,358,584 - 29,410,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03629,680,362 - 29,769,683 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3629,680,366 - 29,734,666 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13629,744,554 - 29,796,457 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03629,679,616 - 29,731,462 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03629,848,287 - 29,900,234 (-)NCBIUU_Cfam_GSD_1.0
TFPI
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1592,345,075 - 92,409,905 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11592,345,083 - 92,409,962 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215102,535,224 - 102,694,356 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TFPI
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11073,004,762 - 73,105,772 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1073,002,522 - 73,105,858 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040126,397,666 - 126,498,612 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tfpi
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248992,406,282 - 2,473,883 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248992,401,861 - 2,473,762 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000010151   ⟹   ENSSTOP00000009105
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493650610,103,139 - 10,171,863 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000028528   ⟹   ENSSTOP00000021705
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493650610,103,139 - 10,160,868 (+)Ensembl
RefSeq Acc Id: XM_005324392   ⟹   XP_005324449
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303146,663,997 - 146,734,966 (-)NCBI
SpeTri2.0NW_00493650610,103,120 - 10,172,800 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013358209   ⟹   XP_013213663
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303146,676,024 - 146,734,969 (-)NCBI
SpeTri2.0NW_00493650610,103,120 - 10,163,413 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040294566   ⟹   XP_040150500
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303146,663,997 - 146,699,006 (-)NCBI
RefSeq Acc Id: XM_040294567   ⟹   XP_040150501
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303146,663,997 - 146,699,007 (-)NCBI
RefSeq Acc Id: XP_005324449   ⟸   XM_005324392
- Peptide Label: isoform X1
- UniProtKB: I3MEX6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013213663   ⟸   XM_013358209
- Peptide Label: isoform X2
- UniProtKB: I3NBF8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040150501   ⟸   XM_040294567
- Peptide Label: isoform X1
- UniProtKB: I3MEX6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150500   ⟸   XM_040294566
- Peptide Label: isoform X1
- UniProtKB: I3MEX6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000021705   ⟸   ENSSTOT00000028528
RefSeq Acc Id: ENSSTOP00000009105   ⟸   ENSSTOT00000010151
Protein Domains
BPTI/Kunitz inhibitor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000010154 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000010151.3 UniProtKB/TrEMBL
  ENSSTOT00000028528.2 UniProtKB/TrEMBL
Gene3D-CATH 4.10.410.10 UniProtKB/TrEMBL
InterPro Kunitz_BPTI UniProtKB/TrEMBL
  Kunitz_BPTI_sf UniProtKB/TrEMBL
  Prtase_inh_Kunz-CS UniProtKB/TrEMBL
  TFPI-like UniProtKB/TrEMBL
NCBI Gene Tfpi ENTREZGENE
PANTHER KUNITZ-TYPE PROTEASE INHIBITOR-RELATED UniProtKB/TrEMBL
  PROTEIN CBG23496 UniProtKB/TrEMBL
  TISSUE FACTOR PATHWAY INHIBITOR UniProtKB/TrEMBL
Pfam Kunitz_BPTI UniProtKB/TrEMBL
PIRSF TFPI UniProtKB/TrEMBL
PRINTS BASICPTASE UniProtKB/TrEMBL
PROSITE BPTI_KUNITZ_1 UniProtKB/TrEMBL
  BPTI_KUNITZ_2 UniProtKB/TrEMBL
SMART SM00131 UniProtKB/TrEMBL
Superfamily-SCOP SSF57362 UniProtKB/TrEMBL
UniProt I3MEX6 ENTREZGENE, UniProtKB/TrEMBL
  I3NBF8 ENTREZGENE, UniProtKB/TrEMBL