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ONTOLOGY REPORT - ANNOTATIONS

Term:response to nutrient
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Accession:GO:0007584 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.
Synonyms:exact_synonym: response to nutrients
 narrow_synonym: nutritional response pathway

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response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase ISO RGD PMID:3082367 RGD:2301027 NCBI chrNW_004955482:4,663,818...4,694,170
Ensembl chrNW_004955482:4,666,615...4,694,021 		JBrowse link
G Abca1 ATP binding cassette subfamily A member 1 ISO RGD PMID:15710224 RGD:1598545 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619 		JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 ISO RGD PMID:15710224 RGD:1598545 NCBI chrNW_004955441:10,964,588...10,987,771
Ensembl chrNW_004955441:10,964,858...10,986,967 		JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO RGD PMID:15710224 RGD:1598545 NCBI chrNW_004955441:10,982,307...11,004,789
Ensembl chrNW_004955441:10,982,307...11,009,116 		JBrowse link
G Acaca acetyl-CoA carboxylase alpha ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955451:679,033...909,892
Ensembl chrNW_004955451:600,254...909,892 		JBrowse link
G Acacb acetyl-CoA carboxylase beta ISO RGD PMID:26394137 PMID:33310031 RGD:329955450 RGD:329955565 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain ISO RGD PMID:15863369 RGD:1598687 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090 		JBrowse link
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:15811777 RGD:1625742 NCBI chrNW_004955403:24,190,674...24,235,354
Ensembl chrNW_004955403:24,190,674...24,236,780 		JBrowse link
G Acsl3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:16772660 RGD:1599807 NCBI chrNW_004955453:10,916,423...10,963,986
Ensembl chrNW_004955453:10,913,786...10,947,963 		JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16772660 RGD:1599807 NCBI chrNW_004955490:6,143,833...6,228,395
Ensembl chrNW_004955490:6,143,833...6,228,452 		JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16772660 RGD:1599807 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539 		JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16772660 RGD:1599807 NCBI chrNW_004955408:3,336,214...3,391,117
Ensembl chrNW_004955408:3,333,392...3,392,141 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:17217160 RGD:1599130 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402 		JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:16483885 RGD:1625763 NCBI chrNW_004955454:4,243,898...4,327,255
Ensembl chrNW_004955454:4,243,898...4,327,308 		JBrowse link
G Adsl adenylosuccinate lyase ISO RGD PMID:7128902 RGD:1598767 NCBI chrNW_004955413:26,067,463...26,084,669
Ensembl chrNW_004955413:26,067,516...26,088,527 		JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase ISO RGD PMID:1413626 RGD:1598782 NCBI chrNW_004955435:4,622,142...4,684,439
Ensembl chrNW_004955435:4,621,991...4,688,139 		JBrowse link
G Ahcy adenosylhomocysteinase ISO RGD PMID:11575573 RGD:1598897 NCBI chrNW_004955422:26,992,295...27,013,100
Ensembl chrNW_004955422:26,992,295...27,013,100 		JBrowse link
G Alad aminolevulinate dehydratase ISO RGD PMID:2394940 RGD:1599023 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Alb albumin ISO RGD PMID:20227002 RGD:2325685 NCBI chrNW_004955447:9,327...21,212 JBrowse link
G Aldh3a1 aldehyde dehydrogenase 3 family member A1 ISO RGD PMID:7751973 RGD:2300308 NCBI chrNW_004955467:96,140...105,738
Ensembl chrNW_004955467:96,140...105,738 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO RGD PMID:16956363 RGD:1626155 NCBI chrNW_004955546:2,495,226...2,550,909
Ensembl chrNW_004955546:2,494,819...2,550,909 		JBrowse link
G Amelx amelogenin X-linked ISO RGD PMID:12667550 RGD:1599089 NCBI chrNW_004955544:1,974,889...1,979,063
Ensembl chrNW_004955544:1,969,216...1,979,063 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:14973070 RGD:2325748 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677 		JBrowse link
G Apoa1 apolipoprotein A1 ISO RGD PMID:2504861 PMID:7556148 RGD:1599154 RGD:1599162 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298 		JBrowse link
G Apoc3 apolipoprotein C3 ISO RGD PMID:7811230 RGD:1599187 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015 		JBrowse link
G Arg2 arginase 2 ISO flavanol-containing dietary RGD PMID:18348861 RGD:4143283 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Arsa arylsulfatase A ISO RGD PMID:4403 RGD:1599236 NCBI chrNW_004955413:33,624,460...33,629,491
Ensembl chrNW_004955413:33,623,525...33,629,771 		JBrowse link
G Arsb arylsulfatase B ISO RGD PMID:2290353 RGD:1599230 NCBI chrNW_004955425:22,120,507...22,281,221
Ensembl chrNW_004955425:22,119,930...22,279,006 		JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:2547341 RGD:1599290 NCBI chrNW_004955456:8,409,767...8,419,915
Ensembl chrNW_004955456:8,411,220...8,416,992 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:15257170 RGD:1599306 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190 		JBrowse link
G Bche butyrylcholinesterase ISO RGD PMID:15002734 RGD:1599460 NCBI chrNW_004955448:15,327,374...15,396,827
Ensembl chrNW_004955448:15,329,273...15,396,970 		JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha ISO RGD PMID:8109974 RGD:1599469 NCBI chrNW_004955555:334,253...357,417
Ensembl chrNW_004955555:333,642...358,799 		JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ISO RGD PMID:8109974 RGD:1599469 NCBI chrNW_004955411:8,427,875...8,626,564
Ensembl chrNW_004955411:8,437,548...8,628,363 		JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:16216918 RGD:1599487 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 ISO hyperlipidic diet RGD PMID:1804504 RGD:4105447 NCBI chrNW_004955420:13,454,379...13,486,700
Ensembl chrNW_004955420:13,452,166...13,486,565 		JBrowse link
G Brca1 BRCA1 DNA repair associated ISO RGD PMID:17044772 RGD:1599498 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G Brca2 BRCA2 DNA repair associated ISO RGD PMID:14583453 RGD:1342419 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432 		JBrowse link
G C2 complement C2 ISO RGD PMID:6776243 RGD:1600580 NCBI chrNW_004955437:449,171...460,898
Ensembl chrNW_004955437:448,672...460,519 		JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:16335790 RGD:2289099 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403 		JBrowse link
G Cckar cholecystokinin A receptor ISO RGD PMID:15127944 RGD:2313376 NCBI chrNW_004955443:18,738,029...18,748,684
Ensembl chrNW_004955443:18,737,974...18,748,727 		JBrowse link
G Ccl28 C-C motif chemokine ligand 28 ISO high salt diet RGD PMID:19829664 RGD:4892132 NCBI chrNW_004955446:18,902,465...18,925,178
Ensembl chrNW_004955446:18,902,636...18,925,561 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:17640331 RGD:2307225 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cd3e CD3e molecule ISO RGD PMID:10498748 RGD:1600792 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha ISO RGD PMID:16856317 RGD:1625375 NCBI chrNW_004955468:3,046,544...3,049,217
Ensembl chrNW_004955468:3,047,931...3,049,080 		JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:17192613 RGD:1600843 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276 		JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19807847 RGD:2314641 NCBI chrNW_004955411:15,052,151...15,077,320
Ensembl chrNW_004955411:15,052,163...15,077,320 		JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO RGD PMID:15042712 RGD:1600915 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073 		JBrowse link
G Cp ceruloplasmin ISO RGD PMID:16597684 RGD:1599628 NCBI chrNW_004955448:470,063...522,909
Ensembl chrNW_004955448:473,179...523,100 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004955422:17,105,887...17,159,696
Ensembl chrNW_004955422:17,109,256...17,159,838 		JBrowse link
G Cubn cubilin ISO RGD PMID:15616221 RGD:1599657 NCBI chrNW_004955429:10,789,674...11,038,297
Ensembl chrNW_004955429:10,788,959...11,038,845 		JBrowse link
G Dad1 defender against cell death 1 ISO RGD PMID:11444866 RGD:1601045 NCBI chrNW_004955409:37,670,266...37,688,226
Ensembl chrNW_004955409:37,670,274...37,688,391 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO RGD PMID:12609979 RGD:1299136 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955414:16,059,781...16,089,727
Ensembl chrNW_004955414:16,059,781...16,089,727 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO RGD PMID:8252488 RGD:1599792 NCBI chrNW_004955435:2,007,185...2,800,907
Ensembl chrNW_004955435:2,007,185...2,766,138 		JBrowse link
G Epo erythropoietin ISO RGD PMID:19136608 RGD:2313644 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO RGD PMID:14670002 RGD:2316276 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582 		JBrowse link
G Fads1 fatty acid desaturase 1 ISO RGD PMID:16333142 RGD:1625417 NCBI chrNW_004955511:5,908,394...5,915,764
Ensembl chrNW_004955511:5,907,726...5,915,764 		JBrowse link
G Fasn fatty acid synthase ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955506:1,063,002...1,079,939
Ensembl chrNW_004955506:1,063,002...1,079,939 		JBrowse link
G Gatm glycine amidinotransferase ISO RGD PMID:11595668 RGD:1599817 NCBI chrNW_004955409:8,068,524...8,084,603
Ensembl chrNW_004955409:8,068,476...8,084,603 		JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit ISO RGD PMID:22906634 RGD:11049541 NCBI chrNW_004955411:2,593,523...2,617,553
Ensembl chrNW_004955411:2,593,541...2,616,539 		JBrowse link
G Gclm glutamate-cysteine ligase modifier subunit ISO RGD PMID:22906634 RGD:11049541 NCBI chrNW_004955423:782,468...805,384
Ensembl chrNW_004955423:782,468...805,384 		JBrowse link
G Glrx glutaredoxin ISO mRNA:decreased expression:heart: RGD PMID:18163565 RGD:2306160 NCBI chrNW_004955418:16,747,709...16,754,718
Ensembl chrNW_004955418:16,747,776...16,752,858 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase ISO RGD PMID:1546971 RGD:2313672 NCBI chrNW_004955492:7,489,080...7,519,590
Ensembl chrNW_004955492:7,489,080...7,519,590 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955431:17,291,890...17,363,611
Ensembl chrNW_004955431:17,291,270...17,363,714 		JBrowse link
G Hat1 histone acetyltransferase 1 ISO RGD PMID:17182829 RGD:2316578 NCBI chrNW_004955449:3,026,194...3,070,448
Ensembl chrNW_004955449:3,025,461...3,066,919 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18815216 RGD:2316595 NCBI chrNW_004955408:11,047,679...11,070,492 JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ISO high-fat diet RGD PMID:5667251 RGD:2326171 NCBI chrNW_004955452:3,720,103...3,734,730
Ensembl chrNW_004955452:3,720,103...3,735,192 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:16702306 RGD:2313754 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:17103110 RGD:1599890 NCBI chrNW_004955435:22,804,484...22,820,807
Ensembl chrNW_004955435:22,804,484...22,821,482 		JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24465380 RGD:10402568 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:2383530 RGD:10046040 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152 		JBrowse link
G Igfbp2 insulin like growth factor binding protein 2 ISO RGD PMID:15576465 RGD:1626503 NCBI chrNW_004955453:16,556,873...16,584,737
Ensembl chrNW_004955453:16,557,194...16,584,634 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:17437639 RGD:1626622 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il4 interleukin 4 ISO RGD PMID:19608731 RGD:5128779 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer ISO RGD PMID:15371280 RGD:1627569 NCBI chrNW_004955446:11,790,636...11,837,734
Ensembl chrNW_004955446:11,790,444...11,835,001 		JBrowse link
G Klk1 kallikrein 1 ISO RGD PMID:12489811 RGD:1641808 NCBI chrNW_004955559:457,030...461,086
Ensembl chrNW_004955559:456,932...465,704 		JBrowse link
G Lct lactase ISO RGD PMID:16497337 RGD:1600244 NCBI chrNW_004955440:3,148,730...3,197,110
Ensembl chrNW_004955440:3,148,730...3,197,110 		JBrowse link
G Ldha lactate dehydrogenase A ISO RGD PMID:15110778 RGD:1600272 NCBI chrNW_004955414:33,087,745...33,100,846 JBrowse link
G Lep leptin ISO protein:altered expression: serum RGD PMID:15616803 PMID:29089335 RGD:1581835 RGD:21410183 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G Lepr leptin receptor ISO RGD PMID:18755573 RGD:5129092 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407 		JBrowse link
G Lipg lipase G, endothelial type ISO RGD PMID:1935790 RGD:1641820 NCBI chrNW_004955402:34,666,757...34,689,726
Ensembl chrNW_004955402:34,667,036...34,687,568 		JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO soy protein isolate RGD PMID:11739881 RGD:7829754 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131 		JBrowse link
G LOC102012042 cytochrome b-245 heavy chain ISO RGD PMID:16784966 RGD:1599678 NCBI chrNW_004955587:781,533...818,149
Ensembl chrNW_004955587:781,388...819,912 		JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:16844298 RGD:1599695 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232 		JBrowse link
G LOC102020379 cytochrome c oxidase subunit 4 isoform 1, mitochondrial ISO RGD PMID:18725894 RGD:2301376 NCBI chrNW_004955541:885,824...890,824
Ensembl chrNW_004955541:884,988...890,890 		JBrowse link
G LOC102021956 alpha-2-macroglobulin ISO RGD PMID:9446838 RGD:1598510 NCBI chrNW_004955413:6,019,457...6,062,366
Ensembl chrNW_004955413:6,019,082...6,062,529 		JBrowse link
G Lta lymphotoxin alpha ISO RGD PMID:12122042 RGD:628312 NCBI chrNW_004955437:114,216...116,003
Ensembl chrNW_004955437:114,640...115,529 		JBrowse link
G Mapt microtubule associated protein tau ISO RGD PMID:16495207 RGD:1599923 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442 		JBrowse link
G Mgp matrix Gla protein ISO RGD PMID:1757478 RGD:1582514 NCBI chrNW_004955413:11,614,851...11,618,090
Ensembl chrNW_004955413:11,615,078...11,618,024 		JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17650800 RGD:1642032 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:17028174) UniProt PMID:17028174 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO RGD PMID:21057821 RGD:5131436 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004955486:2,054,775...2,056,130 JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:21092375 RGD:5133236 NCBI chrNW_004955484:7,012,373...7,028,182
Ensembl chrNW_004955484:7,012,506...7,027,604 		JBrowse link
G Nrf1 nuclear respiratory factor 1 ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004955479:10,325,214...10,471,421
Ensembl chrNW_004955479:10,324,443...10,472,875 		JBrowse link
G Oxct1 3-oxoacid CoA-transferase 1 ISO RGD PMID:20025965 RGD:2326188 NCBI chrNW_004955426:25,885,518...25,998,187
Ensembl chrNW_004955426:25,885,518...26,003,743 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:9566595 RGD:1642373 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO soybean diet
high-fat diet		 RGD PMID:19657097 PMID:19880292 RGD:4107735 RGD:4108477 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820 		JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:11368649 PMID:26394137 RGD:1625592 RGD:329955565 NCBI chrNW_004955545:1,742,432...1,749,632
Ensembl chrNW_004955545:1,739,152...1,749,632 		JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:7929251 RGD:2303136 NCBI chrNW_004955450:4,907,962...4,935,179
Ensembl chrNW_004955450:4,907,788...4,936,199 		JBrowse link
G Plec plectin ISO RGD PMID:12095991 RGD:729534 NCBI chrNW_004955454:2,583,138...2,644,308
Ensembl chrNW_004955454:2,583,138...2,643,211 		JBrowse link
G Por P450 (cytochrome) oxidoreductase ISO low protein diet RGD PMID:17392395 RGD:4889828 NCBI chrNW_004955456:14,698,589...14,748,520
Ensembl chrNW_004955456:14,698,589...14,748,520 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:26394137 PMID:33310031 RGD:329955450 RGD:329955565 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435 		JBrowse link
G Ppargc1b PPARG coactivator 1 beta ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955415:4,638,057...4,756,885
Ensembl chrNW_004955415:4,644,998...4,757,093 		JBrowse link
G Prl prolactin ISO RGD PMID:17447162 RGD:1642572 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:17166883 RGD:2292540 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO RGD PMID:10913029 RGD:1642983 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:14986719 RGD:1643116 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994 		JBrowse link
G Ryr2 ryanodine receptor 2 ISO RGD PMID:17224993 RGD:1599246 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509 		JBrowse link
G Serpinc1 serpin family C member 1 ISO RGD PMID:17123684 RGD:1599322 NCBI chrNW_004955406:14,024,183...14,036,206
Ensembl chrNW_004955406:14,024,313...14,035,948 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 ISO RGD PMID:17341692 RGD:4107716 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 ISO dietary phosphate RGD PMID:15917299 RGD:7243142 NCBI chrNW_004955422:15,295,800...15,818,067
Ensembl chrNW_004955422:15,295,772...15,814,711 		JBrowse link
G Si sucrase-isomaltase ISO RGD PMID:7873573 RGD:1625555 NCBI chrNW_004955448:14,686,315...14,777,298
Ensembl chrNW_004955448:14,685,963...14,777,338 		JBrowse link
G Slc27a4 solute carrier family 27 member 4 ISO RGD PMID:17638014 RGD:2312797 NCBI chrNW_004955570:853,856...866,383
Ensembl chrNW_004955570:853,849...866,383 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO dietary phosphate RGD PMID:10027934 RGD:7243095 NCBI chrNW_004955408:29,626,775...29,640,811
Ensembl chrNW_004955408:29,626,775...29,640,875 		JBrowse link
G Slc37a4 solute carrier family 37 member 4 ISO RGD PMID:2996302 RGD:1625652 NCBI chrNW_004955412:20,133,652...20,140,134
Ensembl chrNW_004955412:20,133,652...20,139,542 		JBrowse link
G Slc6a19 solute carrier family 6 member 19 ISO RGD PMID:17264310 RGD:1600036 NCBI chrNW_004955504:617,683...633,594
Ensembl chrNW_004955504:616,768...633,654 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:21068163 RGD:4889469 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17612656 RGD:1642718 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640 		JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO RGD PMID:12563020 RGD:1598705 NCBI chrNW_004955458:383,123...394,003
Ensembl chrNW_004955458:382,892...394,749 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:16882930 RGD:1600074 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO RGD PMID:15454281 RGD:1600101 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762 		JBrowse link
G Suox sulfite oxidase ISO RGD PMID:3404287 RGD:1600116 NCBI chrNW_004955458:3,584,390...3,589,764
Ensembl chrNW_004955458:3,585,482...3,590,559 		JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:14621185 RGD:1601435 NCBI chrNW_004955495:5,539,382...5,557,441
Ensembl chrNW_004955495:5,539,889...5,557,441 		JBrowse link
G Tfam transcription factor A, mitochondrial ISO RGD PMID:33310031 RGD:329955450 NCBI chrNW_004955425:12,106,506...12,121,625
Ensembl chrNW_004955425:12,106,877...12,120,782 		JBrowse link
G Tfrc transferrin receptor ISO RGD PMID:18340409 RGD:2292029 NCBI chrNW_004955420:12,348,392...12,372,714
Ensembl chrNW_004955420:12,348,821...12,372,691 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:11675406 RGD:1601602 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837 		JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (PMID:26342724) MGI PMID:26342724 NCBI chrNW_004955481:2,977,245...3,009,724
Ensembl chrNW_004955481:2,995,922...3,013,408 		JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO RGD PMID:16696921 RGD:1624172 NCBI chrNW_004955417:24,804,708...24,831,338
Ensembl chrNW_004955417:24,804,664...24,831,894 		JBrowse link
G Ttpa alpha tocopherol transfer protein ISO RGD PMID:9868180 RGD:1600433 NCBI chrNW_004955444:15,877,972...15,891,949
Ensembl chrNW_004955444:15,869,940...15,894,544 		JBrowse link
G Txn2 thioredoxin 2 ISO Brassica oleracea RGD PMID:18163565 RGD:2306160 NCBI chrNW_004955413:23,044,866...23,056,017
Ensembl chrNW_004955413:23,041,559...23,056,018 		JBrowse link
G Ucp3 uncoupling protein 3 ISO RGD PMID:16962595 RGD:2313536 NCBI chrNW_004955414:17,558,889...17,578,108
Ensembl chrNW_004955414:17,558,889...17,578,737 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:19199090 RGD:2313106 NCBI chrNW_004955435:5,390,745...5,410,025
Ensembl chrNW_004955435:5,390,751...5,411,691 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:11882325 RGD:1625576 NCBI chrNW_004955434:7,013,092...7,050,103
Ensembl chrNW_004955434:7,013,092...7,050,103 		JBrowse link
G Xbp1 X-box binding protein 1 ISO RGD PMID:26394137 RGD:329955565 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
behavioral response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc16a1 solute carrier family 16 member 1 involved_in ISO (MGI:5545659|PMID:24367518) UniProt PMID:24367518 MGI:5545659 NCBI chrNW_004955435:16,334,382...16,361,737
Ensembl chrNW_004955435:16,334,793...16,342,552 		JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in ISO (PMID:14722620) BHF-UCL PMID:14722620 NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728 		JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chrNW_004955456:13,788,992...13,818,836 JBrowse link
G Lep leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in ISO (PMID:29123071), (PMID:35776786) UniProt PMID:29123071 PMID:35776786 NCBI chrNW_004955432:19,046,121...19,107,178
Ensembl chrNW_004955432:19,046,121...19,107,753 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020 		JBrowse link
G Mat2a methionine adenosyltransferase 2A involved_in ISO (PMID:38006878) UniProt PMID:38006878 NCBI chrNW_004955424:1,953,623...1,961,164
Ensembl chrNW_004955424:1,953,623...1,961,164 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:38006878) UniProt PMID:38006878 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chrNW_004955492:3,372,915...3,474,173
Ensembl chrNW_004955492:3,376,512...3,474,180 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:22676582 RGD:405100711 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISO (MGI:7565201|PMID:38006878)
(PMID:38006878)		 UniProt PMID:38006878 MGI:7565201 NCBI chrNW_004955559:1,205,340...1,215,672
Ensembl chrNW_004955559:1,203,283...1,215,021 		JBrowse link
cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 ISO N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chrNW_004955439:21,123,886...21,142,562
Ensembl chrNW_004955439:21,122,923...21,142,480 		JBrowse link
G Ccne1 cyclin E1 ISO RGD PMID:17979132 RGD:2289272 NCBI chrNW_004955468:7,803,610...7,814,872
Ensembl chrNW_004955468:7,803,346...7,814,872 		JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in ISO (PMID:17597576) BHF-UCL PMID:17597576 NCBI chrNW_004955472:12,275,613...12,280,141
Ensembl chrNW_004955472:12,275,544...12,280,528 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (PMID:22017875), (PMID:22017877) UniProt PMID:22017875 PMID:22017877 NCBI chrNW_004955415:4,921,356...4,966,705
Ensembl chrNW_004955415:4,921,852...4,966,705 		JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:15825833 RGD:2316268 NCBI chrNW_004955459:10,342,528...10,347,700
Ensembl chrNW_004955459:10,342,251...10,347,733 		JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:15531134 RGD:1582714 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979 		JBrowse link
G Lpl lipoprotein lipase involved_in ISO (MGI:6282942|PMID:21986524) ARUK-UCL PMID:21986524 MGI:6282942 NCBI chrNW_004955403:43,646,084...43,672,116
Ensembl chrNW_004955403:43,646,084...43,673,967 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:22017875), (PMID:22017876), (PMID:22017877) UniProt PMID:22017875 PMID:22017876 PMID:22017877 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (MGI:5428826|PMID:22360721) UniProt PMID:22360721 MGI:5428826 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403 		JBrowse link
G Pld1 phospholipase D1 involved_in ISO (PMID:25936805) UniProt PMID:25936805 NCBI chrNW_004955420:1,697,716...1,892,741
Ensembl chrNW_004955420:1,696,751...1,892,741 		JBrowse link
G Prdm4 PR/SET domain 4 ISO fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chrNW_004955405:41,335,019...41,354,625
Ensembl chrNW_004955405:41,336,199...41,353,261 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:22017876) UniProt PMID:22017876 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
G Tnks tankyrase ISO RGD PMID:25876076 RGD:13628743 NCBI chrNW_004955463:5,589,194...5,770,141
Ensembl chrNW_004955463:5,588,423...5,764,581 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) UniProt PMID:20348926 MGI:4442277 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592 		JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chrNW_004955408:788,856...791,505 JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808 		JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663 		JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chrNW_004955407:26,524,487...26,533,038
Ensembl chrNW_004955407:26,524,130...26,533,038 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978 		JBrowse link
G Casr calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210 		JBrowse link
G Fes FES proto-oncogene, tyrosine kinase involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chrNW_004955416:14,948,121...14,959,035
Ensembl chrNW_004955416:14,948,123...14,960,005 		JBrowse link
G Fgf23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chrNW_004955413:2,182,459...2,192,279
Ensembl chrNW_004955413:2,182,459...2,192,279 		JBrowse link
G Fzd2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chrNW_004955451:17,501,410...17,503,726 JBrowse link
G Gdap1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chrNW_004955444:6,053,422...6,069,741
Ensembl chrNW_004955444:6,051,301...6,069,765 		JBrowse link
G Il15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chrNW_004955471:1,496,352...1,583,919
Ensembl chrNW_004955471:1,497,483...1,511,469 		JBrowse link
G Itgb1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842 		JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832 		JBrowse link
G LOC102013768 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ISO RGD PMID:28104492 RGD:151665513 NCBI chrNW_004955445:4,874,583...4,891,723
Ensembl chrNW_004955445:4,873,942...4,891,780 		JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chrNW_004955441:1,405,340...1,626,668
Ensembl chrNW_004955441:1,232,041...1,627,470 		JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961 		JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chrNW_004955416:10,197,957...10,221,104
Ensembl chrNW_004955416:10,198,099...10,220,792 		JBrowse link
G Penk proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chrNW_004955454:15,425,712...15,426,685
Ensembl chrNW_004955454:15,426,017...15,426,685 		JBrowse link
G Phex phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chrNW_004955509:2,357,263...2,546,802
Ensembl chrNW_004955509:2,357,263...2,546,802 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514 		JBrowse link
G Tnc tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chrNW_004955419:12,569,620...12,662,897
Ensembl chrNW_004955419:12,569,547...12,662,958 		JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048 		JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073 		JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473 		JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:16359517) UniProt PMID:16359517 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809 		JBrowse link
G Postn periostin involved_in ISO (PMID:18450759)
(MGI:3804342|PMID:18450759)		 UniProt PMID:18450759 MGI:3804342 NCBI chrNW_004955431:8,510,646...8,544,901
Ensembl chrNW_004955431:8,510,624...8,544,971 		JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255 		JBrowse link
G Sik2 salt inducible kinase 2 involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chrNW_004955412:13,342,032...13,458,076
Ensembl chrNW_004955412:13,342,032...13,457,563 		JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in ISO (PMID:24671081) UniProt PMID:24671081 NCBI chrNW_004955495:2,168,992...2,173,581 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chrNW_004955454:8,759,860...8,763,603
Ensembl chrNW_004955454:8,758,636...8,764,427 		JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057 		JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 involved_in ISO (PMID:10207113) UniProt PMID:10207113 NCBI chrNW_004955469:6,676,780...6,892,587
Ensembl chrNW_004955469:6,794,821...6,892,566 		JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255 		JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117 		JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (PMID:14742444) MGI PMID:14742444 NCBI chrNW_004955451:16,460,737...16,464,529
Ensembl chrNW_004955451:16,459,879...16,464,529 		JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:15496471)
(PMID:21471514)
(PMID:14742444)		 MGI PMID:14742444 PMID:15496471 PMID:21471514 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:21471514) MGI PMID:21471514 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:7852331)
(MGI:1330677|PMID:9890958)		 BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chrNW_004955468:12,814,810...12,821,383
Ensembl chrNW_004955468:12,814,810...12,821,383 		JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting involved_in ISO (PMID:7852331)
(MGI:1330677|PMID:9890958)		 BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chrNW_004955468:4,565,089...4,574,294
Ensembl chrNW_004955468:4,565,025...4,574,619 		JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001 		JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) UniProt PMID:15890672 NCBI chrNW_004955455:2,130,104...2,171,868
Ensembl chrNW_004955455:2,127,377...2,171,850 		JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492 		JBrowse link
G Vdr vitamin D receptor involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048 		JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:16324150) MGI PMID:16324150 NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:14985122) UniProt PMID:14985122 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492 		JBrowse link
G Trim24 tripartite motif containing 24 acts_upstream_of_or_within ISO (PMID:18287084) MGI PMID:18287084 NCBI chrNW_004955494:4,308,924...4,421,588
Ensembl chrNW_004955494:4,308,924...4,370,160 		JBrowse link
response to biotin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hlcs holocarboxylase synthetase involved_in ISO (PMID:17904341) RGD
UniProt		 PMID:16359899 PMID:17904341 RGD:2313678 NCBI chrNW_004955407:35,870,820...36,062,066
Ensembl chrNW_004955407:35,873,826...36,074,868 		JBrowse link
G Otc ornithine transcarbamylase ISO RGD PMID:8558326 RGD:4144076 NCBI chrNW_004955601:481,524...543,176
Ensembl chrNW_004955601:481,480...543,176 		JBrowse link
response to cobalamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 molecule ISO RGD PMID:16716410 RGD:2313422 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Cd40lg CD40 ligand ISO RGD PMID:16716410 RGD:2313422 NCBI chrNW_004955489:8,465,571...8,477,714
Ensembl chrNW_004955489:8,465,164...8,477,746 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:21185268 RGD:5131503 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO RGD PMID:18183619 RGD:2298839 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516 		JBrowse link
G Sds serine dehydratase ISO RGD PMID:17761010 RGD:2311256 NCBI chrNW_004955482:9,646,523...9,653,471
Ensembl chrNW_004955482:9,643,919...9,653,375 		JBrowse link
response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 (JR blood group) ISO RGD PMID:19552531 RGD:2316102 NCBI chrNW_004955474:12,365,903...12,408,715 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO RGD PMID:19001765 RGD:2314143 NCBI chrNW_004955405:37,941,243...37,943,641
Ensembl chrNW_004955405:37,941,243...37,943,641 		JBrowse link
G Bche butyrylcholinesterase ISO RGD PMID:16442260 RGD:1599454 NCBI chrNW_004955448:15,327,374...15,396,827
Ensembl chrNW_004955448:15,329,273...15,396,970 		JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:18156304 RGD:2290422 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Cbs cystathionine beta-synthase acts_upstream_of_or_within ISO (PMID:10993757) MGI PMID:10993757 NCBI chrNW_004955407:38,924,355...38,939,790
Ensembl chrNW_004955407:38,924,321...38,939,790 		JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO RGD PMID:12899944 RGD:1599867 NCBI chrNW_004955495:4,800,103...4,807,714
Ensembl chrNW_004955495:4,799,922...4,807,252 		JBrowse link
G Gpx1 glutathione peroxidase 1 ISO RGD PMID:16251605 RGD:2306623 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Gsn gelsolin ISO RGD PMID:12899944 RGD:1599867 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 ISO RGD PMID:16251605 RGD:2306623 NCBI chrNW_004955418:1,915,985...1,931,017
Ensembl chrNW_004955418:1,915,985...1,931,017 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:17050573) MGI PMID:17050573 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:20051376 RGD:2316897 NCBI chrNW_004955477:7,103,035...7,375,073
Ensembl chrNW_004955477:7,102,977...7,376,530 		JBrowse link
G Mog myelin oligodendrocyte glycoprotein ISO RGD PMID:20090312 RGD:9685541 NCBI chrNW_004955583:136,077...150,597
Ensembl chrNW_004955583:136,077...150,649 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:15313378 RGD:6893667 NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:26776679) MGI PMID:26776679 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nrf1 nuclear respiratory factor 1 ISO RGD PMID:17709439 RGD:2302403 NCBI chrNW_004955479:10,325,214...10,471,421
Ensembl chrNW_004955479:10,324,443...10,472,875 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO RGD PMID:20051376 RGD:2316897 NCBI chrNW_004955561:1,277,362...1,282,949
Ensembl chrNW_004955561:1,277,365...1,282,793 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:18156304 RGD:2290422 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:9528665 RGD:5133428 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:17482424 RGD:7421601 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant ISO RGD PMID:19110235 RGD:2315908 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538 		JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:18758938 RGD:2311242 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Cat catalase ISO RGD PMID:20698742 RGD:9068891 NCBI chrNW_004955422:11,783,973...11,826,970
Ensembl chrNW_004955422:11,781,835...11,827,464 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO RGD PMID:9834927 RGD:2317836 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428 		JBrowse link
G Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ISO in PCB-treated rats RGD PMID:17280759 RGD:4891016 NCBI chrNW_004955422:23,104,752...23,251,250
Ensembl chrNW_004955422:23,101,795...23,148,999 		JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:18983910 RGD:2311086 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:18983910 RGD:2311086 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:9275042 RGD:2307414 NCBI chrNW_004955446:14,309,516...14,421,991
Ensembl chrNW_004955446:14,309,349...14,422,170 		JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO in PCB-treated rats RGD PMID:17280759 RGD:4891016 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232 		JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:20122981 RGD:2317376 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163 		JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:9495521 RGD:2300067 NCBI chrNW_004955408:6,100,123...6,122,460
Ensembl chrNW_004955408:6,099,003...6,122,459 		JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:14737039 RGD:1601646 NCBI chrNW_004955413:3,672,470...3,825,588
Ensembl chrNW_004955413:3,672,470...3,819,571 		JBrowse link
response to menaquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mif macrophage migration inhibitory factor ISO RGD PMID:15856362 RGD:1641992 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460 		JBrowse link
response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO vitamin C RGD PMID:9559098 RGD:4144791 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Hmbs hydroxymethylbilane synthase ISO vitamin C RGD PMID:9559098 RGD:4144791 NCBI chrNW_004955412:20,192,519...20,202,635
Ensembl chrNW_004955412:20,192,522...20,202,635 		JBrowse link
G Nnt nicotinamide nucleotide transhydrogenase ISO RGD PMID:25761734 RGD:13513980 NCBI chrNW_004955446:18,685,511...18,778,024
Ensembl chrNW_004955446:18,685,516...18,778,024 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO biotin RGD PMID:11833042 RGD:2311192 NCBI chrNW_004955497:7,281,886...7,307,969 JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:7766014 RGD:1642377 NCBI chrNW_004955577:365,031...443,138
Ensembl chrNW_004955577:367,288...443,138 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO choline RGD PMID:23413810 RGD:9491848 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426 		JBrowse link
response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:26729079 RGD:11041096 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Ager advanced glycosylation end-product specific receptor ISO RGD PMID:22274401 RGD:7245566 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:11169459 RGD:2306337 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180 		JBrowse link
G Apoc3 apolipoprotein C3 ISO RGD PMID:7811230 RGD:1599187 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015 		JBrowse link
G Arg1 arginase 1 ISO RGD PMID:18271400 RGD:4142841 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:21188516 RGD:4891124 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588 		JBrowse link
G Cat catalase ISO RGD PMID:23485553 RGD:9068476 NCBI chrNW_004955422:11,783,973...11,826,970
Ensembl chrNW_004955422:11,781,835...11,827,464 		JBrowse link
G Cd44 CD44 molecule (IN blood group) ISO RGD PMID:16804311 RGD:2289372 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:23333085 RGD:9588314 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:23333085 RGD:9588314 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:23333085 RGD:9588314 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301 		JBrowse link
G Epo erythropoietin ISO RGD PMID:9027729 RGD:2313658 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355 		JBrowse link
G Fads1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chrNW_004955511:5,908,394...5,915,764
Ensembl chrNW_004955511:5,907,726...5,915,764 		JBrowse link
G Gata4 GATA binding protein 4 ISO RGD PMID:23333085 RGD:9588314 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267 		JBrowse link
G Gsr glutathione-disulfide reductase ISO RGD PMID:22984325 RGD:7257533 NCBI chrNW_004955463:7,130,459...7,153,631
Ensembl chrNW_004955463:7,131,364...7,153,583 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:24998947 RGD:11041625 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:31023823) MGI PMID:31023823 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142 		JBrowse link
G LOC102010850 cytochrome P450 1A1 ISO Retinal or retinol RGD PMID:10381141 RGD:2306682 NCBI chrNW_004955450:3,183,958...3,189,488
Ensembl chrNW_004955450:3,183,750...3,189,488 		JBrowse link
G LOC102023166 cytochrome P450 26B1 ISO RGD PMID:19700416 RGD:6484694 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423 		JBrowse link
G Lrat lecithin retinol acyltransferase ISO RGD PMID:19700416 RGD:6484694 NCBI chrNW_004955471:2,603,395...2,610,988
Ensembl chrNW_004955471:2,603,678...2,609,079 		JBrowse link
G Map1b microtubule associated protein 1B ISO RGD PMID:12414111 RGD:2304021 NCBI chrNW_004955575:914,607...1,020,971
Ensembl chrNW_004955575:913,723...1,021,028 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17164434 RGD:1642048 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming ISO RGD PMID:18495461 RGD:2324677 NCBI chrNW_004955476:11,108,826...11,135,697
Ensembl chrNW_004955476:11,108,826...11,135,697 		JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:10634605 RGD:2303747 NCBI chrNW_004955420:12,228,801...12,274,840 JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming ISO RGD PMID:10634605 RGD:2303747 NCBI chrNW_004955476:11,061,405...11,084,294 JBrowse link
G Pitx2 paired like homeodomain 2 ISO RGD PMID:18955041 RGD:5131996 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310 		JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:19342198 RGD:2324880 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:18384703 RGD:2301891 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
G Rara retinoic acid receptor alpha ISO RGD PMID:18384703 RGD:2301891 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within ISO (PMID:11222375) MGI PMID:11222375 NCBI chrNW_004955508:6,046,738...6,072,202
Ensembl chrNW_004955508:6,046,316...6,072,288 		JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:16180333 RGD:1643110 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994 		JBrowse link
G Serpina7 serpin family A member 7 ISO RGD PMID:6785400 RGD:2312335 NCBI chrNW_004955548:2,855,377...2,861,946
Ensembl chrNW_004955548:2,855,111...2,861,952 		JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:10385596 RGD:4144157 NCBI chrNW_004955424:1,849,313...1,858,087
Ensembl chrNW_004955424:1,849,314...1,858,087 		JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:10385596 RGD:4144157 NCBI chrNW_004955403:45,649,149...45,651,421
Ensembl chrNW_004955403:45,649,122...45,651,837 		JBrowse link
G Si sucrase-isomaltase ISO RGD PMID:15309444 RGD:1625547 NCBI chrNW_004955448:14,686,315...14,777,298
Ensembl chrNW_004955448:14,685,963...14,777,338 		JBrowse link
G Slc30a4 solute carrier family 30 member 4 ISO RGD PMID:12421840 RGD:2299952 NCBI chrNW_004955409:7,963,454...7,991,600
Ensembl chrNW_004955409:7,963,454...7,995,027 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO RGD PMID:20507281 RGD:7243129 NCBI chrNW_004955408:29,626,775...29,640,811
Ensembl chrNW_004955408:29,626,775...29,640,875 		JBrowse link
G Tshb thyroid stimulating hormone subunit beta ISO RGD PMID:17311942 RGD:1624303 NCBI chrNW_004955435:18,316,585...18,339,935
Ensembl chrNW_004955435:18,316,585...18,339,935 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:10395942 RGD:5133444 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:23106861 RGD:7483561 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO RGD PMID:20088549 RGD:4144199 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Tspo translocator protein ISO RGD PMID:10517697 RGD:2317171 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075 		JBrowse link
response to vitamin B2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT enhancer binding protein alpha ISO RGD PMID:16856317 RGD:1625375 NCBI chrNW_004955468:3,046,544...3,049,217
Ensembl chrNW_004955468:3,047,931...3,049,080 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:3676170 RGD:2317124 NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240 		JBrowse link
response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO RGD PMID:19878707 RGD:2326081 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619 		JBrowse link
G Angpt1 angiopoietin 1 ISO RGD PMID:17557352 RGD:1643100 NCBI chrNW_004955417:30,199,508...30,386,695
Ensembl chrNW_004955417:30,198,842...30,386,266 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:19878707 RGD:2326081 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:19878707 RGD:2326081 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269 		JBrowse link
G Scap SREBF chaperone ISO RGD PMID:19878707 RGD:2326081 NCBI chrNW_004955420:24,813,683...24,869,602
Ensembl chrNW_004955420:24,813,534...24,869,480 		JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO RGD PMID:19878707 RGD:2326081 NCBI chrNW_004955482:4,813,502...4,836,479
Ensembl chrNW_004955482:4,813,955...4,837,392 		JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:17516866 RGD:2290576 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
response to vitamin B6 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated involved_in ISO (PMID:12082181) MGI PMID:12082181 NCBI chrNW_004955452:1,820,212...1,873,877
Ensembl chrNW_004955452:1,820,174...1,874,226 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:12082181) MGI PMID:12082181 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Kynu kynureninase involved_in ISO (PMID:1939450) UniProt PMID:1939450 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761 		JBrowse link
response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20013813 RGD:2315563 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Alpl alkaline phosphatase, biomineralization associated involved_in ISO (PMID:17023519) BHF-UCL PMID:17023519 NCBI chrNW_004955452:1,820,212...1,873,877
Ensembl chrNW_004955452:1,820,174...1,874,226 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (PMID:17023519) BHF-UCL PMID:17023519 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978 		JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO RGD PMID:17554252 RGD:2289035 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795 		JBrowse link
G Cd4 CD4 molecule ISO RGD PMID:8759780 RGD:10058969 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535 		JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:16322758) BHF-UCL PMID:16322758 NCBI chrNW_004955495:1,755,280...1,759,125
Ensembl chrNW_004955495:1,755,878...1,757,037 		JBrowse link
G Crym crystallin mu ISO RGD PMID:2809492 RGD:2303730 NCBI chrNW_004955493:443,956...460,041
Ensembl chrNW_004955493:443,532...460,133 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO RGD PMID:15637289 RGD:2311387 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:27209698 RGD:405157752 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:27209698 RGD:405157752 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558 		JBrowse link
G Ggcx gamma-glutamyl carboxylase ISO RGD PMID:3840747 RGD:11040515 NCBI chrNW_004955424:1,926,924...1,952,635
Ensembl chrNW_004955424:1,936,772...1,952,635 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:17621647 RGD:1626651 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Insr insulin receptor ISO 1,25-dihydroxyvitamin D3, in diabetic rats RGD PMID:18638371 RGD:2307025 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149 		JBrowse link
G Kl klotho ISO RGD PMID:20631679 RGD:10403078 NCBI chrNW_004955431:12,782,913...12,833,215
Ensembl chrNW_004955431:12,782,846...12,833,215 		JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (MGI:1097206|PMID:9295274)
(PMID:16549446)		 RGD
BHF-UCL		 PMID:3000565 PMID:9295274 PMID:16549446 MGI:1097206 RGD:2307325 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001 		JBrowse link
G LOC102013768 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial involved_in ISO (PMID:16720713) BHF-UCL PMID:16720713 NCBI chrNW_004955445:4,874,583...4,891,723
Ensembl chrNW_004955445:4,873,942...4,891,780 		JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:9541123 RGD:1641848 NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948 		JBrowse link
G Nrg1 neuregulin 1 ISO RGD PMID:27209698 RGD:405157752 NCBI chrNW_004955463:8,009,436...9,037,116
Ensembl chrNW_004955463:8,009,530...9,037,116 		JBrowse link
G Phex phosphate regulating endopeptidase X-linked ISO RGD PMID:14693675 RGD:11556273 NCBI chrNW_004955509:2,357,263...2,546,802
Ensembl chrNW_004955509:2,357,263...2,546,802 		JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:15225789 RGD:1642467 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206 		JBrowse link
G Prkcb protein kinase C beta ISO RGD PMID:10206343 RGD:1625620 NCBI chrNW_004955493:2,395,494...2,710,522
Ensembl chrNW_004955493:2,395,109...2,710,934 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18348265 RGD:2300284 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171 		JBrowse link
G Pth parathyroid hormone ISO RGD PMID:22926202 RGD:7242796 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117 		JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:12048211 RGD:625496 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994 		JBrowse link
G Serpinh1 serpin family H member 1 ISO RGD PMID:32585450 RGD:41410783 NCBI chrNW_004955414:16,284,845...16,292,828
Ensembl chrNW_004955414:16,284,845...16,292,963 		JBrowse link
G Slc8a2 solute carrier family 8 member A2 ISO RGD PMID:20113508 RGD:2316972 NCBI chrNW_004955574:1,290,907...1,315,399
Ensembl chrNW_004955574:1,288,952...1,315,401 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in ISO (PMID:16720713) BHF-UCL PMID:16720713 NCBI chrNW_004955474:1,914,477...1,922,025
Ensembl chrNW_004955474:1,913,829...1,922,016 		JBrowse link
G Stc1 stanniocalcin 1 ISO RGD PMID:11702003 RGD:2324701 NCBI chrNW_004955403:46,969,837...46,982,075
Ensembl chrNW_004955403:46,969,677...46,982,191 		JBrowse link
G Stc2 stanniocalcin 2 ISO RGD PMID:10508929 RGD:634221 NCBI chrNW_004955408:25,937,174...25,950,221
Ensembl chrNW_004955408:25,934,932...25,949,399 		JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:11956143 PMID:24613393 RGD:11073674 RGD:2302111 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO RGD PMID:11956143 RGD:2302111 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248 		JBrowse link
G Tpcn2 two pore segment channel 2 ISO RGD PMID:20197420 RGD:9585651 NCBI chrNW_004955422:16,899,730...16,923,962
Ensembl chrNW_004955422:16,900,239...16,923,978 		JBrowse link
G Trim25 tripartite motif containing 25 ISO RGD PMID:10425199 RGD:1300518 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258 		JBrowse link
G Tyr tyrosinase ISO RGD PMID:6175546 RGD:8694330 NCBI chrNW_004955414:4,244,035...4,314,001
Ensembl chrNW_004955414:4,244,035...4,314,001 		JBrowse link
G Vim vimentin ISO RGD PMID:18687349 RGD:6480443 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:16716042 RGD:1624294 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488 		JBrowse link
G Alad aminolevulinate dehydratase ISO in lead-treated rats RGD PMID:17572058 RGD:4144165 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545 		JBrowse link
G Arg1 arginase 1 ISO RGD PMID:14624471 RGD:4143267 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:14624471 RGD:4143267 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:26261574 RGD:11085403 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Becn1 beclin 1 ISO RGD PMID:19138675 RGD:6483096 NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730 		JBrowse link
G Cat catalase ISO RGD PMID:19641679 PMID:19914224 RGD:5130868 RGD:9068475 NCBI chrNW_004955422:11,783,973...11,826,970
Ensembl chrNW_004955422:11,781,835...11,827,464 		JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:17015179 RGD:2289141 NCBI chrNW_004955422:16,449,921...16,462,676
Ensembl chrNW_004955422:16,448,770...16,463,300 		JBrowse link
G Ccne1 cyclin E1 ISO RGD PMID:16298738 RGD:2289285 NCBI chrNW_004955468:7,803,610...7,814,872
Ensembl chrNW_004955468:7,803,346...7,814,872 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ISO RGD PMID:17953670 RGD:2301732 NCBI chrNW_004955441:4,908,318...4,944,343 JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO RGD PMID:18611397 RGD:2302078 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767 		JBrowse link
G Gpx1 glutathione peroxidase 1 ISO RGD PMID:16038882 RGD:152998891 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:15753162 RGD:2326153 NCBI chrNW_004955446:18,978,261...18,996,794
Ensembl chrNW_004955446:18,978,102...18,998,951 		JBrowse link
G Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ISO in PCB-treated rats RGD PMID:17280759 RGD:4891016 NCBI chrNW_004955422:23,104,752...23,251,250
Ensembl chrNW_004955422:23,101,795...23,148,999 		JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:17447016 RGD:2311524 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666 		JBrowse link
G Lep leptin ISO RGD PMID:20404018 RGD:5128593 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472 		JBrowse link
G LOC102010322 cytochrome P450 1A2 ISO RGD PMID:16520233 RGD:401900296 NCBI chrNW_004955450:3,165,107...3,171,894
Ensembl chrNW_004955450:3,165,106...3,171,942 		JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO in PCB-treated rats RGD PMID:17280759 RGD:4891016 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232 		JBrowse link
G Mef2c myocyte enhancer factor 2C ISO RGD PMID:16534476 RGD:5131617 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:10609875 RGD:1642014 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460 		JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:17200156 RGD:1642147 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566 		JBrowse link
G Orm1 orosomucoid 1 ISO RGD PMID:11444866 RGD:1601045 NCBI chrNW_004955419:13,262,119...13,264,986 JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO RGD PMID:15247049 RGD:11039057 NCBI chrNW_004955506:5,569,280...5,572,164
Ensembl chrNW_004955506:5,569,302...5,570,120 		JBrowse link
response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:21944271 RGD:6483564 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978 		JBrowse link
G F5 coagulation factor V ISO RGD PMID:658784 RGD:11564341 NCBI chrNW_004955462:7,695,004...7,757,832
Ensembl chrNW_004955462:7,694,939...7,757,463 		JBrowse link
G F7 coagulation factor VII ISO RGD PMID:3379837 RGD:2312317 NCBI chrNW_004955404:685,170...692,797
Ensembl chrNW_004955404:680,594...693,665 		JBrowse link
G Ggcx gamma-glutamyl carboxylase ISO RGD PMID:8702425 RGD:2316484 NCBI chrNW_004955424:1,926,924...1,952,635
Ensembl chrNW_004955424:1,936,772...1,952,635 		JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) CACAO PMID:22720752 NCBI chrNW_004955437:5,940,825...5,945,367
Ensembl chrNW_004955437:5,942,106...5,945,431 		JBrowse link
G Vdr vitamin D receptor involved_in ISO (PMID:16549446)
(PMID:28698609)		 BHF-UCL
UniProt		 PMID:16549446 PMID:28698609 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12362
    response to stimulus 6684
      response to chemical 3562
        response to nutrient 321
          behavioral response to nutrient + 1
          cellular response to nutrient + 74
          detection of nutrient + 0
          response to vitamin + 178
paths to the root