Pklr (pyruvate kinase L/R) - Rat Genome Database

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Gene: Pklr (pyruvate kinase L/R) Chinchilla lanigera
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Symbol: Pklr
Name: pyruvate kinase L/R
RGD ID: 8923840
Description: ENCODES a protein that exhibits monosaccharide binding (ortholog); pyruvate kinase activity (ortholog); INVOLVED IN cellular response to epinephrine stimulus (ortholog); cellular response to insulin stimulus (ortholog); glycolytic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; forkhead class A signaling pathway; glycogen storage disease type VII pathway; ASSOCIATED WITH Burns (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); congenital nonspherocytic hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pyruvate kinase PKLR; pyruvate kinase, liver and RBC
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555451,739,152 - 1,749,632 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555451,742,432 - 1,749,632 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Pklr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555451,739,152 - 1,749,632 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555451,742,432 - 1,749,632 (-)NCBIChiLan1.0ChiLan1.0
PKLR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381155,289,293 - 155,308,654 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1155,289,293 - 155,301,438 (-)EnsemblGRCh38hg38GRCh38
GRCh371155,259,084 - 155,271,229 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361153,526,254 - 153,537,835 (-)NCBINCBI36Build 36hg18NCBI36
Build 341152,072,702 - 152,084,298NCBI
Celera1128,332,260 - 128,344,368 (-)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1126,621,396 - 126,633,527 (-)NCBIHuRef
CHM1_11156,654,499 - 156,666,666 (-)NCBICHM1_1
T2T-CHM13v2.01154,427,854 - 154,447,170 (-)NCBIT2T-CHM13v2.0
Pklr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39389,043,429 - 89,054,122 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl389,043,449 - 89,054,091 (+)EnsemblGRCm39 Ensembl
GRCm38389,136,122 - 89,146,815 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl389,136,142 - 89,146,784 (+)EnsemblGRCm38mm10GRCm38
MGSCv37388,940,064 - 88,950,516 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36389,222,069 - 89,231,560 (+)NCBIMGSCv36mm8
Celera389,168,271 - 89,180,284 (+)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.01NCBI
Pklr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,840,779 - 176,849,637 (+)NCBIGRCr8
mRatBN7.22174,543,008 - 174,551,863 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2174,543,039 - 174,551,870 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2181,689,431 - 181,697,810 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02179,711,798 - 179,720,184 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02174,311,737 - 174,320,129 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02188,449,158 - 188,458,034 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2188,449,210 - 188,459,592 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,865,529 - 207,874,394 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42181,214,853 - 181,223,505 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12181,164,961 - 181,173,618 (+)NCBI
Celera2168,486,468 - 168,494,841 (+)NCBICelera
RH 3.4 Map21154.4RGD
Cytogenetic Map2q34NCBI
PKLR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2194,540,674 - 94,554,495 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,272,005 - 94,285,754 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01130,634,111 - 130,646,644 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11134,239,565 - 134,250,957 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1134,239,565 - 134,251,351 (-)Ensemblpanpan1.1panPan2
PKLR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1742,263,899 - 42,272,770 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl742,263,761 - 42,272,755 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha741,754,768 - 41,762,716 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0742,132,983 - 42,141,903 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl742,133,018 - 42,141,000 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1741,912,888 - 41,920,846 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0741,966,693 - 41,974,641 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0742,250,696 - 42,258,642 (+)NCBIUU_Cfam_GSD_1.0
Pklr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505825,740,581 - 25,749,528 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365804,767,109 - 4,779,916 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365804,770,977 - 4,799,316 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PKLR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl494,537,019 - 94,546,555 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1494,536,978 - 94,546,561 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24103,324,615 - 103,327,436 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PKLR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1208,540,228 - 8,547,184 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl208,540,763 - 8,545,884 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660387,877,122 - 7,888,169 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pklr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248852,264,928 - 2,272,171 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248852,261,850 - 2,272,175 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000007417   ⟹   ENSCLAP00000007302
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555451,739,152 - 1,749,151 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000007418   ⟹   ENSCLAP00000007303
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555451,742,710 - 1,749,632 (-)Ensembl
RefSeq Acc Id: XM_005411597   ⟹   XP_005411654
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,710 - 1,749,632 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005411598   ⟹   XP_005411655
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,710 - 1,749,151 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013508344   ⟹   XP_013363798
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,432 - 1,749,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013508345   ⟹   XP_013363799
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,710 - 1,749,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013508346   ⟹   XP_013363800
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,710 - 1,749,151 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013508347   ⟹   XP_013363801
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555451,742,432 - 1,747,046 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005411654   ⟸   XM_005411597
- Peptide Label: isoform X2
- UniProtKB: A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005411655   ⟸   XM_005411598
- Peptide Label: isoform X5
- UniProtKB: A0A8C2UZZ8 (UniProtKB/TrEMBL),   A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013363798   ⟸   XM_013508344
- Peptide Label: isoform X1
- UniProtKB: A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013363801   ⟸   XM_013508347
- Peptide Label: isoform X6
- UniProtKB: A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013363799   ⟸   XM_013508345
- Peptide Label: isoform X3
- UniProtKB: A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013363800   ⟸   XM_013508346
- Peptide Label: isoform X4
- UniProtKB: A0A8C2V2U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000007303   ⟸   ENSCLAT00000007418
RefSeq Acc Id: ENSCLAP00000007302   ⟸   ENSCLAT00000007417

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005136 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000007417 ENTREZGENE
  ENSCLAT00000007417.1 UniProtKB/TrEMBL
  ENSCLAT00000007418 ENTREZGENE
  ENSCLAT00000007418.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.33.10 UniProtKB/TrEMBL
  3.20.20.60 UniProtKB/TrEMBL
  3.40.1380.20 UniProtKB/TrEMBL
InterPro Pyr_Knase UniProtKB/TrEMBL
  Pyrv/PenolPyrv_Kinase-like_dom UniProtKB/TrEMBL
  Pyrv_Kinase-like_dom_sf UniProtKB/TrEMBL
  Pyrv_Knase-like_insert_dom_sf UniProtKB/TrEMBL
  Pyrv_Knase_AS UniProtKB/TrEMBL
  Pyrv_Knase_brl UniProtKB/TrEMBL
  Pyrv_Knase_C UniProtKB/TrEMBL
  Pyrv_Knase_C_sf UniProtKB/TrEMBL
  Pyrv_Knase_insert_dom_sf UniProtKB/TrEMBL
NCBI Gene Pklr ENTREZGENE
PANTHER PTHR11817 UniProtKB/TrEMBL
  PYRUVATE KINASE PKLR UniProtKB/TrEMBL
Pfam PF00224 UniProtKB/TrEMBL
  PK_C UniProtKB/TrEMBL
PRINTS PYRUVTKNASE UniProtKB/TrEMBL
PROSITE PYRUVATE_KINASE UniProtKB/TrEMBL
Superfamily-SCOP SSF50800 UniProtKB/TrEMBL
  SSF51621 UniProtKB/TrEMBL
  SSF52935 UniProtKB/TrEMBL
UniProt A0A8C2UZZ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2V2U8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-04 Pklr  pyruvate kinase L/R    pyruvate kinase, liver and RBC  Symbol and/or name change 5135510 APPROVED