D14Arb1 Marker Search Result - Rat Genome Database

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Marker: D14Arb1

Symbol: D14Arb1
Previously known as: oxsts7689; R0269-C08; 
RGD ID: 41984
Expected Size: 272 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2145,440,438 - 5,440,710 (+)MAPPERmRatBN7.2
Rnor_6.0146,801,814 - 6,802,085NCBIRnor6.0
Rnor_5.0146,789,883 - 6,790,154UniSTSRnor5.0
RGSC_v3.4146,549,154 - 6,549,426RGDRGSC3.4
RGSC_v3.4146,549,155 - 6,549,426UniSTSRGSC3.4
RGSC_v3.1146,549,154 - 6,549,426RGD
Celera145,579,265 - 5,579,536UniSTS
RH 3.4 Map1491.2UniSTS
RH 3.4 Map1491.2RGD
SHRSP x BN Map142.29UniSTS
SHRSP x BN Map142.29RGD
Cytogenetic Map14p22UniSTS
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
Genes:   Ibsp  


Annotation


#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. Electronic Submission of SSLP Data Sets Wilder R. Oct.2000. National Institute of Arthritis and Musculoskeletal and Skin Diseases, ARB Rat Genetic Database


 
Forward Primer GGACTCCCCATTCTGTCTTTGC
Reverse Primer AACCTCGAAGCATTCCACCTGG
 
Strain, Expected Size(s)

ACI/N 271 AVN/Orl 271 BBDP/Rhw 271
BBDR/Rhw 271 BC/CpbU 271 BDIX/Han 271
BN-Lx/Cub 275 BN/SsNHsd 275 BP/Cub 281
BUF/Pit 291 COP/OlaHsd 271 DA/PitN 271
DON/Melb 271 F344/Pit 271 FHH/Eur 269
GH/Omr 271 GK/KyoSwe 291 IS/Kyo 271
LE/Mol 271 LEW/Pit 271 LH/Mav 291
LN/Mav 291 LOU/CHan 271 M520/N 271
MHS/Gib 271 MNR/N 271 MNRA/N 271
MNS/Gib 291 MR/Pit 271 NEDH/K 271
NP9 291 ODU/N 277 OKA/Wsl 321
OM/Ztm 271 P5C 291 PVG/Pit 271
SD/Rij 291 SHR/OlaHsd 281 SR/Jr 291
SS/Jr 291 WAG/RijKyo 271 WF/Pit 271
WIST/Nhg 277 WKY/OlaHsd 281 WN/N 271
WTC/Kyo 281


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2855Ibspintegrin-binding sialoprotein1454398255452570Rat



1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
724541Niddm53Non-insulin dependent diabetes mellitus QTL 530.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1438130749088978Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
71115Niddm15Non-insulin dependent diabetes mellitus QTL 154.8blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14121760611030812Rat
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat

1 to 10 of 11 rows


Note Type Note Reference
Database
Acc Id
Source(s)
NCBI Gene 24477 UniSTS
NCBI Nucleotide J04215