Gper1 (G protein-coupled estrogen receptor 1) - Rat Genome Database

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Gene: Gper1 (G protein-coupled estrogen receptor 1) Rattus norvegicus
Analyze
Symbol: Gper1
Name: G protein-coupled estrogen receptor 1
RGD ID: 619845
Description: Enables G protein-coupled estrogen receptor activity and estradiol binding activity. Involved in several processes, including apoptotic nuclear changes; cellular response to steroid hormone stimulus; and positive regulation of signal transduction. Acts upstream of with a positive effect on vasodilation. Located in several cellular components, including dendrite; postsynaptic density; and presynaptic membrane. Orthologous to human GPER1 (G protein-coupled estrogen receptor 1); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; estrogen signaling pathway; serotonin signaling pathway; INTERACTS WITH (S)-amphetamine; 1,3,5-trinitro-1,3,5-triazinane; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: chemoattractant receptor-like 2; chemokine receptor-like 2; G protein-coupled receptor 30; G-protein coupled estrogen receptor 1; G-protein coupled receptor 30; G-protein coupled receptor 41; Gper; Gpr30; GPR41; membrane estrogen receptor; mER
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Gper1em1Bj  
Genetic Models: SS-Gper1em1Bj-/-
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81220,331,073 - 20,336,527 (-)NCBIGRCr8
mRatBN7.21215,217,217 - 15,222,679 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1215,217,442 - 15,221,889 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1216,027,880 - 16,029,158 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,651,625 - 16,652,903 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,677,933 - 15,679,211 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01217,309,122 - 17,315,267 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1217,309,834 - 17,311,112 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,296,086 - 19,301,691 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41215,718,615 - 15,719,893 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11215,748,542 - 15,749,821 (-)NCBI
Celera1216,971,703 - 16,972,981 (-)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Source
Original Reference(s)
Gper1RatCOVID-19  ISOGPER1 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Gper1RatDysbiosis amelioratesIMP 39939000 RGD 
Gper1Ratendometriosis  ISOGper1 (Mus musculus)39938861protein:decreased expression:endometrium (mouse)RGD 
Gper1Ratendometriosis  ISOGPER1 (Homo sapiens)39939083protein:increased expression:endometrium and cytoplasm (human)RGD 
Gper1Ratgeneralized anxiety disorder severityISOGPER1 (Homo sapiens)39938860protein:increased expression:serum (human)RGD 
Gper1Ratmelanoma severityISOGPER1 (Homo sapiens)39939016protein:increased expression:skin (human)RGD 
Gper1RatSpinal Cord Injuries  IMP 8552988 RGD 
Object Symbol
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Original Reference(s)
Gper1RatBreast Neoplasms  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:24440569
Gper1RatHepatomegaly  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:30641053
Gper1RatHyperalgesia  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:25280432
Gper1Ratidiopathic pulmonary fibrosis  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:30165855
Gper1Ratleiomyoma  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:31468104
Gper1RatLiver Neoplasms  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:30641053
Gper1RatMultiple Abnormalities  ISOGPER1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21984484

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Original Reference(s)
Gper1Rat(S)-amphetamine increases expressionEXP 6480464Dextroamphetamine results in increased expression of GPER1 mRNACTDPMID:16715494
Gper1Rat(S)-naringenin multiple interactionsISOGPER1 (Homo sapiens)6480464[Tamoxifen co-treated with naringenin] results in decreased expression of GPER1 mRNA and [Tamoxifen co-treated with naringenin] results in decreased expression of GPER1 proteinCTDPMID:30153467
Gper1Rat(S)-naringenin decreases expressionISOGPER1 (Homo sapiens)6480464naringenin metabolite results in decreased expression of GPER1 mRNA more ...CTDPMID:30153467 and PMID:36235125
Gper1Rat1,2-dimethylhydrazine decreases expressionISOGper1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of GPER1 mRNACTDPMID:22206623
Gper1Rat1,3,5-trinitro-1,3,5-triazinane increases expressionEXP 6480464cyclonite results in increased expression of GPER1 mRNACTDPMID:25559034
Gper1Rat17alpha-ethynylestradiol increases expressionISOGPER1 (Homo sapiens)6480464Ethinyl Estradiol results in increased expression of GPER1 mRNACTDPMID:29783106
Gper1Rat17beta-estradiol multiple interactionsISOGPER1 (Homo sapiens)64804642 more ...CTDPMID:15090535 more ...
Gper1Rat17beta-estradiol increases expressionISOGper1 (Mus musculus)6480464Estradiol results in increased expression of GPER1 proteinCTDPMID:29360751
Gper1Rat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of GPER1 mRNACTDPMID:27174447
Gper1Rat17beta-estradiol increases expressionISOGPER1 (Homo sapiens)6480464Estradiol results in increased expression of GPER1 mRNA and Estradiol results in increased expression of GPER1 proteinCTDPMID:17121429 more ...
Gper1Rat17beta-estradiol affects bindingISOGPER1 (Homo sapiens)6480464Estradiol analog binds to GPER1 protein and Estradiol binds to GPER1 proteinCTDPMID:25616260 more ...
Gper1Rat17beta-estradiol affects response to substanceEXP 6480464GPER1 protein affects the susceptibility to EstradiolCTDPMID:22265196
Gper1Rat17beta-estradiol affects response to substanceISOGPER1 (Homo sapiens)6480464GPER1 protein affects the susceptibility to EstradiolCTDPMID:24440569
Gper1Rat17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with bisphenol A] results in decreased expression of GPER mRNA and GPER1 protein affects the reaction [Estradiol results in decreased expression of HTR1A protein]CTDPMID:22265196 and PMID:35700937
Gper1Rat17beta-estradiol decreases expressionISOGPER1 (Homo sapiens)6480464Estradiol results in decreased expression of GPER1 mRNACTDPMID:21185374 more ...
Gper1Rat17beta-estradiol multiple interactionsISOGper1 (Mus musculus)6480464Estradiol affects the reaction [PTK2B protein affects the expression of GPER1 mRNA] and GPER1 affects the reaction [Estradiol results in increased expression of FOS mRNA]CTDPMID:21813366 and PMID:29428397
Gper1Rat17beta-estradiol increases activityISOGPER1 (Homo sapiens)6480464Estradiol results in increased activity of GPER1 proteinCTDPMID:19153601
Gper1Rat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOGper1 (Mus musculus)6480464[Dietary Sucrose co-treated with Dietary Fats co-treated with bisphenol A co-treated with Diethylhexyl Phthalate co-treated with Tetrachlorodibenzodioxin co-treated with 2 more ...CTDPMID:30722647 and PMID:32784060
Gper1Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOGPER1 (Homo sapiens)64804642 more ...CTDPMID:23146750
Gper1Rat2,2',4,4'-Tetrabromodiphenyl ether multiple interactionsISOGPER1 (Homo sapiens)64804642 more ...CTDPMID:29790728

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Biological Process
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Original Reference(s)
Gper1Ratadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inISSUniProtKB:Q995271600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inISOGper1 (Mus musculus)1624291 PMID:21149639RGDPMID:21149639
Gper1Ratadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inISOGPER1 (Homo sapiens)1624291 PMID:15539556RGDPMID:15539556
Gper1Ratadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inISSUniProtKB:Q8BMP41600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratapoptotic chromosome condensation involved_inIDA 8553942PMID:23907461UniProt 
Gper1Ratapoptotic process involved_inIEAUniProtKB-KW:KW-00531600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcell communication involved_inIEAARBA:ARBA000289451600115GO_REF:0000117UniProtGO_REF:0000117
Gper1Ratcell differentiation involved_inIEAUniProtKB-KW:KW-02211600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcellular response to estradiol stimulus involved_inIDA 8553942PMID:23907461UniProt 
Gper1Ratcellular response to estradiol stimulus involved_inISOGper1 (Mus musculus)1624291 PMID:21149639 more ...RGDPMID:21149639 more ...
Gper1Ratcellular response to estradiol stimulus involved_inIBAMGI:1924104 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gper1Ratcellular response to estradiol stimulus involved_inIEAARBA:ARBA000435621600115GO_REF:0000117UniProtGO_REF:0000117
Gper1Ratcellular response to estradiol stimulus involved_inISOGPER1 (Homo sapiens)1624291 PMID:15539556 more ...RGDPMID:15539556 more ...
Gper1Ratcellular response to estradiol stimulus involved_inIDA 8553898PMID:23283935UniProt 
Gper1Ratcellular response to estradiol stimulus involved_inISSUniProtKB:Q995271600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratcellular response to glucose stimulus involved_inISSUniProtKB:Q8BMP41600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratcellular response to glucose stimulus involved_inISOGper1 (Mus musculus)1624291 PMID:21673097RGDPMID:21673097
Gper1Ratcellular response to mineralocorticoid stimulus involved_inIDA 8553898PMID:23283935UniProt 
Gper1Ratcellular response to peptide hormone stimulus involved_inISOGPER1 (Homo sapiens)1624291 PMID:21427217RGDPMID:21427217
Gper1Ratcellular response to peptide hormone stimulus involved_inISSUniProtKB:Q995271600115GO_REF:0000024UniProtGO_REF:0000024
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Cellular Component
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Original Reference(s)
Gper1Rataxon located_inIDA 8553395PMID:22919059UniProt 
Gper1Rataxon located_inIEAUniProtKB-SubCell:SL-02791600115GO_REF:0000044UniProtGO_REF:0000044
Gper1Rataxon terminus located_inIDA 8553395PMID:22919059UniProt 
Gper1Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcytoplasm located_inISOGper1 (Mus musculus)1624291 PMID:21149639 and PMID:23871778RGDPMID:21149639 and PMID:23871778
Gper1Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Gper1Ratcytoplasm located_inISSUniProtKB:Q8BMP41600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratcytoplasm located_inIDA 8553395PMID:22919059UniProt 
Gper1Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcytoplasmic vesicle located_inIEAUniProtKB-KW:KW-09681600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcytoplasmic vesicle membrane located_inIEAUniProtKB-SubCell:SL-00891600115GO_REF:0000044UniProtGO_REF:0000044
Gper1Ratcytoplasmic vesicle membrane located_inISSUniProtKB:Q995271600115GO_REF:0000024UniProtGO_REF:0000024
Gper1Ratcytoplasmic vesicle membrane located_inISOGPER1 (Homo sapiens)1624291 PMID:21540189RGDPMID:21540189
Gper1Ratcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043
Gper1Ratcytoskeleton located_inIEAUniProtKB-SubCell:SL-00901600115GO_REF:0000044UniProtGO_REF:0000044
Gper1Ratcytosol located_inISOGPER1 (Homo sapiens)1624291 RGDGO_REF:0000052
Gper1Ratdendrite located_inIDA 8553395PMID:22919059UniProt 
Gper1Ratdendrite located_inIEAUniProtKB-SubCell:SL-02831600115GO_REF:0000044UniProtGO_REF:0000044
Gper1Ratdendritic shaft located_inIDA 8554508PMID:23822769UniProt 
Gper1Ratdendritic shaft located_inIDA 8553395PMID:22919059UniProt 
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Molecular Function
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RGD Manual Annotations

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Original Reference(s)
Gper1Ratabnormal free fatty acids level  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratdecreased mean systemic arterial blood pressure  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratdecreased pulse pressure  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratdecreased systemic arterial diastolic blood pressure  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratdecreased systemic arterial systolic blood pressure  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratincreased body length  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratincreased body weight  IMP 39939000compared to wild type SS ratRGD 
Gper1Ratincreased vasodilation  IMP 39939000compared to wild type SS ratRGD 

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Reference Title
Reference Citation
1. Estrogen receptors are found in glia and at extranuclear neuronal sites in the dorsal striatum of female rats: evidence for cholinergic but not dopaminergic colocalization. Almey A, etal., Endocrinology. 2012 Nov;153(11):5373-83. doi: 10.1210/en.2012-1458. Epub 2012 Aug 23.
2. The roles of membrane estrogen receptor subtypes in modulating dopamine transporters in PC-12 cells. Alyea RA, etal., J Neurochem. 2008 Aug;106(4):1525-33. Epub 2008 May 19.
3. Breast cancer, estrogen receptor and ligands. Bai Z and Gust R, Arch Pharm (Weinheim). 2009 Mar;342(3):133-49.
4. Molecular cloning and tissue expression of a novel orphan G protein-coupled receptor from rat lung. Bonini JA, etal., Biochem Biophys Res Commun 1997 May 8;234(1):190-3.
5. Selective GPER activation decreases proliferation and activates apoptosis in tumor Leydig cells. Chimento A, etal., Cell Death Dis. 2013 Aug 1;4:e747. doi: 10.1038/cddis.2013.275.
6. Structural and mechanistic insights into bisphenols action provide guidelines for risk assessment and discovery of bisphenol A substitutes. Delfosse V, etal., Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):14930-5. doi: 10.1073/pnas.1203574109. Epub 2012 Aug 27.
7. Activation of a novel estrogen receptor, GPER, is cardioprotective in male and female rats. Deschamps AM and Murphy E, Am J Physiol Heart Circ Physiol. 2009 Nov;297(5):H1806-13. Epub 2009 Aug 28.
8. Serum levels of G protein-coupled estrogen receptor 1 (GPER1) in drug-naive patients with generalized anxiety disorder. Fındıklı E, etal., Psychiatry Res. 2016 Oct 30;244:312-6. doi: 10.1016/j.psychres.2016.04.098. Epub 2016 Jul 22.
9. Expression of G protein-coupled oestrogen receptor in melanoma and in pregnancy-associated melanoma. Fábián M, etal., J Eur Acad Dermatol Venereol. 2017 Sep;31(9):1453-1461. doi: 10.1111/jdv.14304. Epub 2017 Jun 20.
10. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
11. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
12. Estradiol activates epithelial sodium channels in rat alveolar cells through the G protein-coupled estrogen receptor. Greenlee MM, etal., Am J Physiol Lung Cell Mol Physiol. 2013 Dec;305(11):L878-89. doi: 10.1152/ajplung.00008.2013. Epub 2013 Oct 4.
13. Aldosterone mediates its rapid effects in vascular endothelial cells through GPER activation. Gros R, etal., Am J Physiol Cell Physiol. 2013 Mar;304(6):C532-40. doi: 10.1152/ajpcell.00203.2012. Epub 2013 Jan 2.
14. G-protein coupled estrogen receptor 1 mediated estrogenic neuroprotection against spinal cord injury. Hu R, etal., Crit Care Med. 2012 Dec;40(12):3230-7. doi: 10.1097/CCM.0b013e3182657560.
15. 2-methoxyestradiol binding of GPR30 down-regulates angiotensin AT(1) receptor. Koganti S, etal., Eur J Pharmacol. 2014 Jan 15;723:131-40. doi: 10.1016/j.ejphar.2013.10.064. Epub 2013 Nov 18.
16. G protein-coupled estrogen receptor1 (GPER1) may mediate Rho-kinase (ROCK-2) up-regulation in coronary endothelial cells. Kurt AH, etal., Endocr Regul. 2013 Apr;47(2):75-84. doi: 10.4149/endo_2013_02_75.
17. Expression and signaling of G protein-coupled estrogen receptor 1 (GPER) in rat sertoli cells. Lucas TF, etal., Biol Reprod. 2010 Aug 1;83(2):307-17. Epub 2010 May 5.
18. The unfolding stories of GPR30, a new membrane-bound estrogen receptor. Maggiolini M and Picard D, J Endocrinol. 2010 Feb;204(2):105-14. Epub 2009 Sep 18.
19. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
20. Spatial and temporal changes in the expression of steroid hormone receptors in mouse model of endometriosis. Mishra A, etal., J Assist Reprod Genet. 2020 May;37(5):1069-1081. doi: 10.1007/s10815-020-01725-6. Epub 2020 Mar 9.
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PMID:15539556   PMID:15705806   PMID:16780796   PMID:17872373   PMID:18586395   PMID:19125412   PMID:19179659   PMID:19220308   PMID:19420011   PMID:19523168   PMID:19741198   PMID:19912997  
PMID:19931550   PMID:20132863   PMID:20347696   PMID:20434187   PMID:20551055   PMID:20596598   PMID:20696528   PMID:20969598   PMID:21149639   PMID:21242460   PMID:21365775   PMID:21427217  
PMID:21540189   PMID:21673097   PMID:21844484   PMID:21865584   PMID:22265196   PMID:22328091   PMID:22378360   PMID:22645130   PMID:22828404   PMID:23066016   PMID:23285008   PMID:23300088  
PMID:23545157   PMID:23610132   PMID:23659385   PMID:23673155   PMID:23674134   PMID:23836701   PMID:23840305   PMID:23871778   PMID:23950890   PMID:24115158   PMID:24594140   PMID:24736568  
PMID:24793639   PMID:25150623   PMID:25211590   PMID:25256868   PMID:25280432   PMID:25310566   PMID:25712524   PMID:25893735   PMID:25936661   PMID:26070386   PMID:26181370   PMID:26187146  
PMID:26241029   PMID:26345541   PMID:26371374   PMID:26391661   PMID:26408543   PMID:26497404   PMID:26628039   PMID:27080432   PMID:27173878   PMID:27249584   PMID:27311857   PMID:27608844  
PMID:27698063   PMID:27849354   PMID:27908726   PMID:28472669   PMID:28733475   PMID:29369009   PMID:29421611   PMID:30218860   PMID:30227089   PMID:30400046   PMID:30570746   PMID:30731078  
PMID:31728701   PMID:32007102   PMID:32272225   PMID:32303987   PMID:32321426   PMID:32632943   PMID:32908490   PMID:33127751   PMID:33193095   PMID:33345973   PMID:33629579   PMID:34076791  
PMID:34255932   PMID:34274445   PMID:34352396   PMID:34399010   PMID:35124781   PMID:35170266   PMID:35729568   PMID:35803362   PMID:36108979   PMID:36152742   PMID:36845134   PMID:37257405  
PMID:38134189   PMID:39063107   PMID:39138706  
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Gper1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81220,331,073 - 20,336,527 (-)NCBIGRCr8
mRatBN7.21215,217,217 - 15,222,679 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1215,217,442 - 15,221,889 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1216,027,880 - 16,029,158 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,651,625 - 16,652,903 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,677,933 - 15,679,211 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01217,309,122 - 17,315,267 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1217,309,834 - 17,311,112 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,296,086 - 19,301,691 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41215,718,615 - 15,719,893 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11215,748,542 - 15,749,821 (-)NCBI
Celera1216,971,703 - 16,972,981 (-)NCBICelera
Cytogenetic Map12q11NCBI
GPER1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3871,087,118 - 1,093,810 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl71,082,208 - 1,093,815 (+)EnsemblGRCh38hg38GRCh38
GRCh3771,126,754 - 1,133,446 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3671,092,969 - 1,099,977 (+)NCBINCBI36Build 36hg18NCBI36
Build 347899,752 - 906,692NCBI
Celera71,094,088 - 1,101,068 (+)NCBICelera
Cytogenetic Map7p22.3NCBI
HuRef71,041,713 - 1,048,693 (+)NCBIHuRef
CHM1_171,126,080 - 1,133,090 (+)NCBICHM1_1
T2T-CHM13v2.071,192,020 - 1,198,681 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v271,180,870 - 1,187,850 (+)NCBI
Gper1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395139,408,905 - 139,413,555 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5139,408,906 - 139,413,555 (+)EnsemblGRCm39 Ensembl
GRCm385139,423,150 - 139,427,800 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5139,423,151 - 139,427,800 (+)EnsemblGRCm38mm10GRCm38
MGSCv375139,899,133 - 139,903,754 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365139,676,821 - 139,681,430 (+)NCBIMGSCv36mm8
Celera5136,477,197 - 136,481,822 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map578.58NCBI
Gper1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554608,790,798 - 8,794,902 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554608,790,798 - 8,794,902 (+)NCBIChiLan1.0ChiLan1.0
GPER1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v266,038,040 - 6,040,197 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1754,349,340 - 54,364,886 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v071,331,586 - 1,338,194 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.171,454,768 - 1,461,376 (+)NCBIpanpan1.1PanPan1.1panPan2
GPER1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1615,792,072 - 15,796,922 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl615,792,897 - 15,794,051 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha617,265,181 - 17,311,159 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0615,922,801 - 15,968,766 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl615,922,807 - 15,927,433 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1615,725,481 - 15,771,429 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0615,652,239 - 15,698,182 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0615,940,139 - 15,986,136 (-)NCBIUU_Cfam_GSD_1.0
Gper1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344143,716,868 - 143,723,998 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367541,288,912 - 1,293,427 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367541,288,891 - 1,293,555 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPER1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3712,160 - 715,980 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13711,427 - 715,982 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23828,578 - 833,139 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPER1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12820,491,874 - 20,497,966 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2820,492,188 - 20,493,315 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660901,198,018 - 1,204,300 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gper1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474026,627,473 - 26,632,027 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474026,627,560 - 26,632,483 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Gper1
22 total Variants

Predicted Target Of
Summary Value
Count of predictions:83
Count of miRNA genes:74
Interacting mature miRNAs:74
Transcripts:ENSRNOT00000001732
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat

1 to 10 of 47 rows

This gene Gper1 is modified in the following models/strains:




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 83 82 51 25 51 6 210 97 93 45 59 31



Ensembl Acc Id: ENSRNOT00000001732   ⟹   ENSRNOP00000001732
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1215,217,442 - 15,221,889 (-)Ensembl
Rnor_6.0 Ensembl1217,309,834 - 17,311,112 (-)Ensembl
RefSeq Acc Id: NM_133573   ⟹   NP_598257
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,331,791 - 20,333,069 (-)NCBI
mRatBN7.21215,217,935 - 15,219,213 (-)NCBI
Rnor_6.01217,309,834 - 17,311,112 (-)NCBI
Rnor_5.01219,296,086 - 19,301,691 (-)NCBI
RGSC_v3.41215,718,615 - 15,719,893 (-)RGD
Celera1216,971,703 - 16,972,981 (-)RGD
Sequence:
RefSeq Acc Id: XM_006248914   ⟹   XP_006248976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81220,331,073 - 20,336,527 (-)NCBI
mRatBN7.21215,217,217 - 15,222,679 (-)NCBI
Rnor_6.01217,309,122 - 17,315,267 (-)NCBI
Rnor_5.01219,296,086 - 19,301,691 (-)NCBI
Sequence:
Protein RefSeqs NP_598257 (Get FASTA)   NCBI Sequence Viewer  
  XP_006248976 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC53208 (Get FASTA)   NCBI Sequence Viewer  
  EDL89767 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000001732.1
  ENSRNOP00000107360
GenBank Protein O08878 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_598257   ⟸   NM_133573
- UniProtKB: O08878 (UniProtKB/Swiss-Prot),   G3V654 (UniProtKB/TrEMBL),   A6K1V7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006248976   ⟸   XM_006248914
- Peptide Label: isoform X1
- UniProtKB: O08878 (UniProtKB/Swiss-Prot),   G3V654 (UniProtKB/TrEMBL),   A6K1V7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000001732   ⟸   ENSRNOT00000001732
Name Modeler Protein Id AA Range Protein Structure
AF-O08878-F1-model_v2 AlphaFold O08878 1-375 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 22 of 22 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-19895 BioCyc
Ensembl Genes ENSRNOG00000001287 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000001732.4 UniProtKB/TrEMBL
  ENSRNOT00000160681 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPER1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171104 UniProtKB/Swiss-Prot
NCBI Gene 171104 ENTREZGENE
PANTHER G-PROTEIN COUPLED ESTROGEN RECEPTOR 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G-PROTEIN COUPLED RECEPTOR 182 AND ESTROGEN RECEPTOR 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gper1 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001287 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6K1V7 ENTREZGENE, UniProtKB/TrEMBL
  G3V654 ENTREZGENE, UniProtKB/TrEMBL
  GPER1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-16 Gper1  G protein-coupled estrogen receptor 1  Gper  G protein-coupled estrogen receptor 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-22 Gper  G protein-coupled estrogen receptor 1  Gpr30  G protein-coupled receptor 30  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-26 Gpr30  G protein-coupled receptor 30      Symbol and Name status set to approved 625702 APPROVED
2002-08-07 Gpr30  G protein-coupled receptor 30      Symbol and Name status set to provisional 70820 PROVISIONAL