ZNF493 (zinc finger protein 493) - Rat Genome Database

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Gene: ZNF493 (zinc finger protein 493) Homo sapiens
Analyze
Symbol: ZNF493
Name: zinc finger protein 493
RGD ID: 1344388
HGNC Page HGNC:23708
Description: Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ36504
RGD Orthologs
Pig
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381921,397,133 - 21,427,577 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1921,397,119 - 21,427,577 (+)EnsemblGRCh38hg38GRCh38
GRCh371921,579,935 - 21,610,379 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361921,371,771 - 21,402,137 (+)NCBINCBI36Build 36hg18NCBI36
Build 341921,371,774 - 21,401,628NCBI
Celera1921,414,646 - 21,445,000 (+)NCBICelera
Cytogenetic Map19p12NCBI
HuRef1921,069,501 - 21,100,053 (+)NCBIHuRef
CHM1_11921,579,564 - 21,609,960 (+)NCBICHM1_1
T2T-CHM13v2.01921,535,634 - 21,566,098 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 29 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF493Human2-hydroxypropanoic acid increases expressionEXP 6480464Lactic Acid results in increased expression of ZNF493 mRNACTDPMID:30851411
ZNF493Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of ZNF493 mRNACTDPMID:28628672
ZNF493Humanaflatoxin B1 decreases methylationEXP 6480464Aflatoxin B1 results in decreased methylation of ZNF493 intronCTDPMID:30157460
ZNF493HumanAflatoxin B2 alpha decreases methylationEXP 6480464aflatoxin B2 results in decreased methylation of ZNF493 intronCTDPMID:30157460
ZNF493Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of ZNF493 intronCTDPMID:30157460
ZNF493Humanbeta-lapachone decreases expressionEXP 6480464beta-lapachone results in decreased expression of ZNF493 mRNACTDPMID:38218311
ZNF493Humanbisphenol A multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of ZNF493 mRNACTDPMID:28628672
ZNF493Humancadmium dichloride decreases expressionEXP 6480464Cadmium Chloride results in decreased expression of ZNF493 mRNACTDPMID:38382870
ZNF493Humanclorgyline increases expressionEXP 6480464Clorgyline results in increased expression of ZNF493 mRNACTDPMID:19691856
ZNF493Humancopper(II) sulfate increases expressionEXP 6480464Copper Sulfate results in increased expression of ZNF493 mRNACTDPMID:19549813
ZNF493Humandexamethasone multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of ZNF493 mRNACTDPMID:28628672
ZNF493Humandorsomorphin multiple interactionsEXP 6480464[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...CTDPMID:27188386
ZNF493Humandoxorubicin decreases expressionEXP 6480464Doxorubicin results in decreased expression of ZNF493 mRNACTDPMID:29803840
ZNF493Humanformaldehyde increases expressionEXP 6480464Formaldehyde results in increased expression of ZNF493 mRNACTDPMID:20655997
ZNF493Humanformaldehyde decreases expressionEXP 6480464Formaldehyde results in decreased expression of ZNF493 mRNACTDPMID:27905399
ZNF493Humanhydralazine multiple interactionsEXP 6480464[Hydralazine co-treated with Valproic Acid] results in increased expression of ZNF493 mRNACTDPMID:17183730
ZNF493Humanindometacin multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of ZNF493 mRNACTDPMID:28628672
ZNF493Humanmercury dibromide decreases expressionEXP 6480464mercuric bromide results in decreased expression of ZNF493 mRNACTDPMID:26272509
ZNF493Humanmercury dibromide multiple interactionsEXP 6480464[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of ZNF493 mRNACTDPMID:27188386
ZNF493Humanmethylmercury chloride decreases expressionEXP 6480464methylmercuric chloride results in decreased expression of ZNF493 mRNACTDPMID:28001369

1 to 20 of 29 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF493Humanregulation of DNA-templated transcription involved_inIEAInterPro:IPR001909 and InterPro:IPR036051150520179 InterProGO_REF:0000002
ZNF493Humanregulation of transcription by RNA polymerase II involved_inIBAMGI:109447 more ...150520179 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF493Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
ZNF493Humannucleus is_active_inIBAFB:FBgn0263490 more ...150520179 GO_CentralGO_REF:0000033
ZNF493Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF493HumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
ZNF493Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
ZNF493Humanprotein binding enablesIPIUniProtKB:Q14696 and UniProtKB:Q9H3R5150520179 PMID:32296183IntActPMID:32296183
ZNF493Humanzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043


#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:14702039   PMID:16344560   PMID:21873635   PMID:28700943   PMID:32296183   PMID:33961781   PMID:37372979  



ZNF493
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381921,397,133 - 21,427,577 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1921,397,119 - 21,427,577 (+)EnsemblGRCh38hg38GRCh38
GRCh371921,579,935 - 21,610,379 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361921,371,771 - 21,402,137 (+)NCBINCBI36Build 36hg18NCBI36
Build 341921,371,774 - 21,401,628NCBI
Celera1921,414,646 - 21,445,000 (+)NCBICelera
Cytogenetic Map19p12NCBI
HuRef1921,069,501 - 21,100,053 (+)NCBIHuRef
CHM1_11921,579,564 - 21,609,960 (+)NCBICHM1_1
T2T-CHM13v2.01921,535,634 - 21,566,098 (+)NCBIT2T-CHM13v2.0
LOC110262090
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1842,324,654 - 42,384,908 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1

.

.
Variants in ZNF493
66 total Variants

Predicted Target Of
Summary Value
Count of predictions:3140
Count of miRNA genes:1134
Interacting mature miRNAs:1414
Transcripts:ENST00000339914, ENST00000355504, ENST00000392288, ENST00000594390, ENST00000596302, ENST00000596815, ENST00000598152, ENST00000599461, ENST00000599517
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human

RH65297  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371921,610,012 - 21,610,196UniSTSGRCh37
Build 361921,401,852 - 21,402,036RGDNCBI36
Celera1921,444,715 - 21,444,899RGD
Cytogenetic Map19p12UniSTS
HuRef1921,099,768 - 21,099,952UniSTS
RH69422  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371921,588,366 - 21,588,585UniSTSGRCh37
Build 361921,380,206 - 21,380,425RGDNCBI36
Celera1921,423,095 - 21,423,314RGD
Cytogenetic Map19p12UniSTS
HuRef1921,077,952 - 21,078,171UniSTS
GeneMap99-GB4 RH Map19123.76UniSTS
NCBI RH Map19195.3UniSTS
UniSTS:481985  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375105,879,494 - 105,879,872UniSTSGRCh37
GRCh375105,879,410 - 105,879,872UniSTSGRCh37
Build 365105,907,309 - 105,907,771RGDNCBI36
Celera5101,820,188 - 101,820,566RGD
HuRef5101,055,598 - 101,055,976UniSTS
HuRef5101,055,514 - 101,055,976UniSTS
UniSTS:486333  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375105,879,497 - 105,879,865UniSTSGRCh37
GRCh375105,879,413 - 105,879,865UniSTSGRCh37
Build 365105,907,312 - 105,907,764RGDNCBI36
Celera5101,820,191 - 101,820,559RGD
HuRef5101,055,601 - 101,055,969UniSTS
HuRef5101,055,517 - 101,055,969UniSTS
D10S16   No map positions available.
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4972 1725 2346 6 623 1951 464 2268 7305 6472 53 3734 1 852 1741 1613 174 1


1 to 28 of 28 rows
RefSeq Transcripts NM_001076678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK093823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK095616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK127476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC112346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA804007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 28 of 28 rows

Ensembl Acc Id: ENST00000339914   ⟹   ENSP00000340651
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,156 - 21,408,799 (+)Ensembl
Ensembl Acc Id: ENST00000355504   ⟹   ENSP00000347691
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,133 - 21,427,163 (+)Ensembl
Ensembl Acc Id: ENST00000392288   ⟹   ENSP00000376110
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,133 - 21,427,577 (+)Ensembl
Ensembl Acc Id: ENST00000594390   ⟹   ENSP00000469680
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,133 - 21,414,643 (+)Ensembl
Ensembl Acc Id: ENST00000596302   ⟹   ENSP00000469368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,119 - 21,423,040 (+)Ensembl
Ensembl Acc Id: ENST00000596815   ⟹   ENSP00000469170
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,133 - 21,405,836 (+)Ensembl
Ensembl Acc Id: ENST00000598152
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,405,278 - 21,422,949 (+)Ensembl
Ensembl Acc Id: ENST00000599461   ⟹   ENSP00000472110
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,397,166 - 21,398,934 (+)Ensembl
Ensembl Acc Id: ENST00000599517
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1921,411,940 - 21,414,599 (+)Ensembl
RefSeq Acc Id: NM_001076678   ⟹   NP_001070146
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,427,577 (+)NCBI
GRCh371921,579,921 - 21,610,297 (+)RGD
Build 361921,371,771 - 21,402,137 (+)NCBI Archive
Celera1921,414,646 - 21,445,000 (+)RGD
HuRef1921,069,501 - 21,100,053 (+)RGD
CHM1_11921,579,564 - 21,609,960 (+)NCBI
T2T-CHM13v2.01921,535,677 - 21,566,098 (+)NCBI
Sequence:
RefSeq Acc Id: NM_145326   ⟹   NP_663299
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,408,804 (+)NCBI
GRCh371921,579,921 - 21,610,297 (+)RGD
Celera1921,414,646 - 21,445,000 (+)RGD
HuRef1921,069,501 - 21,100,053 (+)RGD
CHM1_11921,579,564 - 21,591,247 (+)NCBI
T2T-CHM13v2.01921,535,677 - 21,547,346 (+)NCBI
Sequence:
RefSeq Acc Id: NM_175910   ⟹   NP_787106
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,427,577 (+)NCBI
GRCh371921,579,921 - 21,610,297 (+)RGD
Build 361921,371,771 - 21,402,137 (+)NCBI Archive
Celera1921,414,646 - 21,445,000 (+)RGD
HuRef1921,069,501 - 21,100,053 (+)RGD
CHM1_11921,579,564 - 21,609,960 (+)NCBI
T2T-CHM13v2.01921,535,677 - 21,566,098 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047438677   ⟹   XP_047294633
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,427,577 (+)NCBI
RefSeq Acc Id: XM_047438678   ⟹   XP_047294634
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,427,577 (+)NCBI
RefSeq Acc Id: XM_047438679   ⟹   XP_047294635
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,400,382 - 21,427,577 (+)NCBI
RefSeq Acc Id: XM_047438680   ⟹   XP_047294636
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,402,253 - 21,427,577 (+)NCBI
RefSeq Acc Id: XM_047438681   ⟹   XP_047294637
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,402,253 - 21,427,577 (+)NCBI
RefSeq Acc Id: XM_054320701   ⟹   XP_054176676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,535,677 - 21,566,098 (+)NCBI
RefSeq Acc Id: XM_054320702   ⟹   XP_054176677
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,535,634 - 21,566,098 (+)NCBI
RefSeq Acc Id: XM_054320703   ⟹   XP_054176678
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,538,926 - 21,566,098 (+)NCBI
RefSeq Acc Id: XM_054320704   ⟹   XP_054176679
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,552,033 - 21,566,098 (+)NCBI
RefSeq Acc Id: XM_054320705   ⟹   XP_054176680
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,535,677 - 21,548,728 (+)NCBI
RefSeq Acc Id: XM_054320706   ⟹   XP_054176681
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01921,535,677 - 21,553,181 (+)NCBI
1 to 30 of 30 rows
Protein RefSeqs NP_001070146 (Get FASTA)   NCBI Sequence Viewer  
  NP_663299 (Get FASTA)   NCBI Sequence Viewer  
  NP_787106 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294633 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294634 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294635 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294636 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294637 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176676 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176677 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176678 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176679 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176680 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176681 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH06408 (Get FASTA)   NCBI Sequence Viewer  
  AAI12347 (Get FASTA)   NCBI Sequence Viewer  
  BAC04591 (Get FASTA)   NCBI Sequence Viewer  
  BAC86997 (Get FASTA)   NCBI Sequence Viewer  
  BAC87465 (Get FASTA)   NCBI Sequence Viewer  
  BAD92323 (Get FASTA)   NCBI Sequence Viewer  
  EAW84896 (Get FASTA)   NCBI Sequence Viewer  
  EAW84898 (Get FASTA)   NCBI Sequence Viewer  
  EAW84899 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000340651
  ENSP00000340651.6
  ENSP00000347691
  ENSP00000347691.4
  ENSP00000376110
  ENSP00000376110.2
GenBank Protein Q6ZR52 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 30 rows
1 to 5 of 21 rows
1 to 5 of 21 rows
RefSeq Acc Id: NP_001070146   ⟸   NM_001076678
- Peptide Label: isoform 3
- UniProtKB: Q6ZR52 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_787106   ⟸   NM_175910
- Peptide Label: isoform 1
- UniProtKB: Q8N965 (UniProtKB/Swiss-Prot),   Q8N1Z6 (UniProtKB/Swiss-Prot),   Q6ZSF6 (UniProtKB/Swiss-Prot),   Q59GM3 (UniProtKB/Swiss-Prot),   G5E974 (UniProtKB/Swiss-Prot),   Q9BR99 (UniProtKB/Swiss-Prot),   Q6ZR52 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_663299   ⟸   NM_145326
- Peptide Label: isoform 2
- UniProtKB: M0QXT4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000469368   ⟸   ENST00000596302
Ensembl Acc Id: ENSP00000469170   ⟸   ENST00000596815
C2H2-type   KRAB

Name Modeler Protein Id AA Range Protein Structure
AF-Q6ZR52-F1-model_v2 AlphaFold Q6ZR52 1-646 view protein structure

RGD ID:6796340
Promoter ID:HG_KWN:29420
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000280561,   OTTHUMT00000280562,   UC002NPV.2,   UC002NPX.1,   UC002NPY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361921,371,521 - 21,372,021 (+)MPROMDB
RGD ID:7239315
Promoter ID:EPDNEW_H25403
Type:initiation region
Name:ZNF493_1
Description:zinc finger protein 493
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25404  EPDNEW_H25405  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,397,133 - 21,397,193EPDNEW
RGD ID:7239317
Promoter ID:EPDNEW_H25404
Type:initiation region
Name:ZNF493_2
Description:zinc finger protein 493
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25403  EPDNEW_H25405  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,405,899 - 21,405,959EPDNEW
RGD ID:7239319
Promoter ID:EPDNEW_H25405
Type:multiple initiation site
Name:ZNF493_3
Description:zinc finger protein 493
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25403  EPDNEW_H25404  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381921,408,145 - 21,408,205EPDNEW


1 to 40 of 42 rows
Database
Acc Id
Source(s)
COSMIC ZNF493 COSMIC
Ensembl Genes ENSG00000196268 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000339914 ENTREZGENE
  ENST00000339914.6 UniProtKB/Swiss-Prot
  ENST00000355504 ENTREZGENE
  ENST00000355504.4 UniProtKB/Swiss-Prot
  ENST00000392288 ENTREZGENE
  ENST00000392288.7 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000196268 GTEx
HGNC ID HGNC:23708 ENTREZGENE
Human Proteome Map ZNF493 Human Proteome Map
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:284443 UniProtKB/Swiss-Prot
NCBI Gene 284443 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/Swiss-Prot
  KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA134932599 PharmGKB
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt G5E974 ENTREZGENE
  M0QXT4 ENTREZGENE, UniProtKB/TrEMBL
  M0QY95 ENTREZGENE, UniProtKB/TrEMBL
  M0R1U0_HUMAN UniProtKB/TrEMBL
  Q2M1I7_HUMAN UniProtKB/TrEMBL
  Q59GM3 ENTREZGENE
  Q6ZR52 ENTREZGENE
  Q6ZSF6 ENTREZGENE
  Q8N1Z6 ENTREZGENE
  Q8N965 ENTREZGENE
  Q9BR99 ENTREZGENE
  ZN493_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary G5E974 UniProtKB/Swiss-Prot
  Q59GM3 UniProtKB/Swiss-Prot
  Q6ZSF6 UniProtKB/Swiss-Prot
  Q8N1Z6 UniProtKB/Swiss-Prot
1 to 40 of 42 rows