Zfp937 (zinc finger protein 937) - Rat Genome Database

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Gene: Zfp937 (zinc finger protein 937) Mus musculus
Analyze
Symbol: Zfp937
Name: zinc finger protein 937
RGD ID: 1618102
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in central nervous system and genitourinary system. Orthologous to human ZNF880 (zinc finger protein 880).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EG245174; Gm4979; RP23-91K11.5; zinc finger protein family member; zinc-finger protein in podocyte I; ZIPO-I
RGD Orthologs
Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm14390   Gm2020  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392150,059,997 - 150,088,658 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2150,059,993 - 150,086,798 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382150,218,077 - 150,246,738 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,218,073 - 150,240,725 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv372150,043,835 - 150,070,610 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362149,873,196 - 149,932,514 (+)NCBIMGSCv36mm8
Celera2151,462,312 - 151,489,086 (+)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.15NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA,IEA)

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15618518   PMID:18287559   PMID:21873635  


Genomics

Comparative Map Data
Zfp937
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392150,059,997 - 150,088,658 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2150,059,993 - 150,086,798 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382150,218,077 - 150,246,738 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,218,073 - 150,240,725 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv372150,043,835 - 150,070,610 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362149,873,196 - 149,932,514 (+)NCBIMGSCv36mm8
Celera2151,462,312 - 151,489,086 (+)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.15NCBI
Zfp937
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83159,009,658 - 159,018,416 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.23138,545,521 - 138,560,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3138,544,658 - 138,557,896 (-)EnsemblmRatBN7.2
Rnor_6.03145,874,270 - 145,884,211 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3145,882,819 - 145,883,210 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.03152,235,464 - 152,244,392 (+)NCBIRnor_5.0Rnor_5.0rn5
Cytogenetic Map3q41NCBI

Variants

.
Variants in Zfp937
1490 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:321
Count of miRNA genes:266
Interacting mature miRNAs:287
Transcripts:ENSMUST00000073782
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
4141033Wg2d_mweight gain in high growth mice 2d (mouse)Not determined143773445160303008Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
13504830Bacsq1_mbaculum shape QTL 1 (mouse)2145716184161016184Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse

Markers in Region
RH125907  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4C1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map7B5UniSTS
Cytogenetic Map2G3UniSTS
cM Map727.0UniSTS
Whitehead/MRC_RH10717.49UniSTS
px-38e3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4D1UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map18D3UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map16B5UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map7F2UniSTS
Cytogenetic Map10D2UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic MapYA1UniSTS
Cytogenetic Map11A3.2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map10D1UniSTS
Cytogenetic Map10A1UniSTS
cM Map1060.0UniSTS
cM Map1106.6UniSTS
cM Map1936.5UniSTS
cM Map520.0UniSTS
cM Map1340.0UniSTS
px-50g7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3F1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map7B5UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map3B-DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map4C1UniSTS
Cytogenetic Map18CUniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map2F2UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map9A1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map4D2.2UniSTS
cM Map74.0UniSTS
cM Map1718.88UniSTS
cM Map241.25UniSTS
cM Map727.0UniSTS
cM Map342.1UniSTS
cM Map275.0UniSTS
cM Map153.6UniSTS
cM Map91.0UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000073782   ⟹   ENSMUSP00000073454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2150,059,993 - 150,083,860 (+)Ensembl
GRCm38.p6 Ensembl2150,218,073 - 150,240,725 (+)Ensembl
Ensembl Acc Id: ENSMUST00000481674   ⟹   ENSMUSP00000260037
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2150,059,998 - 150,086,798 (+)Ensembl
RefSeq Acc Id: NM_001142411   ⟹   NP_001135883
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392150,060,019 - 150,086,794 (+)NCBI
GRCm382150,218,099 - 150,244,874 (+)NCBI
MGSCv372150,043,835 - 150,070,610 (+)RGD
Celera2151,462,312 - 151,489,086 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030251209   ⟹   XP_030107069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392150,059,997 - 150,088,658 (+)NCBI
GRCm382150,218,077 - 150,246,738 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251210   ⟹   XP_030107070
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392150,060,003 - 150,088,658 (+)NCBI
GRCm382150,218,083 - 150,246,738 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001135883 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107069 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107070 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH34102 (Get FASTA)   NCBI Sequence Viewer  
  BAG85044 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000073454
  ENSMUSP00000073454.4
RefSeq Acc Id: NP_001135883   ⟸   NM_001142411
- UniProtKB: A2ANU7 (UniProtKB/TrEMBL),   B6ZLR2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107069   ⟸   XM_030251209
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030107070   ⟸   XM_030251210
- Peptide Label: isoform X2
Ensembl Acc Id: ENSMUSP00000073454   ⟸   ENSMUST00000073782
Ensembl Acc Id: ENSMUSP00000260037   ⟸   ENSMUST00000481674
Protein Domains
C2H2-type   KRAB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2ANU7-F1-model_v2 AlphaFold A2ANU7 1-503 view protein structure

Promoters
RGD ID:6831501
Promoter ID:MM_KWN:32178
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3
Transcripts:ENSMUST00000073782
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362150,043,694 - 150,044,194 (+)MPROMDB
RGD ID:6879092
Promoter ID:EPDNEW_M2997
Type:multiple initiation site
Name:Zfp937_1
Description:Mus musculus zinc finger protein 937 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382150,218,113 - 150,218,173EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3644476 AgrOrtholog
Ensembl Genes ENSMUSG00000060336 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000073782 ENTREZGENE
  ENSMUST00000073782.4 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB_dom_sf UniProtKB/TrEMBL
  Krueppel-associated_box UniProtKB/TrEMBL
  Zinc_finger UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report mmu:245174 UniProtKB/TrEMBL
MGD MGI:3644476 ENTREZGENE
NCBI Gene 245174 ENTREZGENE
PANTHER PR DOMAIN ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 771 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 936 UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_4 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PhenoGen Zfp937 PhenoGen
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP Krueppel-associated_box UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A2ANU7 ENTREZGENE, UniProtKB/TrEMBL
  B6ZLR2 ENTREZGENE, UniProtKB/TrEMBL
  Q8K056_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Zfp937  zinc finger protein 937  Gm4979  predicted gene 4979  Symbol and/or name change 5135510 APPROVED