ZNF790 (zinc finger protein 790) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ZNF790 (zinc finger protein 790) Homo sapiens
Analyze
Symbol: ZNF790
Name: zinc finger protein 790
RGD ID: 1603835
HGNC Page HGNC:33114
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ20350; MGC62100
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381936,817,428 - 36,850,792 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1936,817,428 - 36,850,787 (-)EnsemblGRCh38hg38GRCh38
GRCh371937,308,330 - 37,341,694 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361942,000,170 - 42,021,124 (-)NCBINCBI36Build 36hg18NCBI36
Celera1934,092,627 - 34,113,574 (-)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1933,778,026 - 33,810,213 (-)NCBIHuRef
CHM1_11937,309,707 - 37,342,149 (-)NCBICHM1_1
T2T-CHM13v2.01939,493,114 - 39,526,474 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 30 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF790Human2,3',4,4',5-Pentachlorobiphenyl increases expressionISORGD:155694464804642,3',4,4',5-pentachlorobiphenyl results in increased expression of ZFP790 mRNACTDPMID:31388691
ZNF790Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:15569446480464Tetrachlorodibenzodioxin affects the expression of ZFP790 mRNACTDPMID:21570461
ZNF790Human2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:15569446480464[TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in decreased expression more ...CTDPMID:25975270
ZNF790Human2-hydroxypropanoic acid decreases expressionEXP 6480464Lactic Acid results in decreased expression of ZNF790 mRNACTDPMID:30851411
ZNF790Humanacrolein multiple interactionsEXP 6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...CTDPMID:32699268
ZNF790Humanaflatoxin B1 increases expressionISORGD:15569446480464Aflatoxin B1 results in increased expression of ZFP790 mRNACTDPMID:19770486
ZNF790Humanalpha-pinene multiple interactionsEXP 6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...CTDPMID:32699268
ZNF790Humanamphetamine decreases expressionISORGD:1503449526480464Amphetamine results in decreased expression of ZFP790 mRNACTDPMID:30779732
ZNF790Humanarsane multiple interactionsEXP 6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
ZNF790Humanarsenic atom multiple interactionsEXP 6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
ZNF790Humanbenzo[a]pyrene decreases methylationEXP 6480464Benzo(a)pyrene results in decreased methylation of ZNF790 promoterCTDPMID:27901495
ZNF790Humanbenzo[a]pyrene multiple interactionsEXP 6480464[AHR gene mutant form affects the susceptibility to Benzo(a)pyrene] which results in decreased expression of more ...CTDPMID:38036013
ZNF790Humanbenzo[a]pyrene increases methylationISORGD:15569446480464Benzo(a)pyrene results in increased methylation of ZFP790 exon; Benzo(a)pyrene results in increased methylation of ZFP790 more ...CTDPMID:27901495
ZNF790Humanbeta-lapachone decreases expressionEXP 6480464beta-lapachone results in decreased expression of ZNF790 mRNACTDPMID:38218311
ZNF790Humancadmium dichloride decreases expressionEXP 6480464Cadmium Chloride results in decreased expression of ZNF790 mRNACTDPMID:38568856
ZNF790HumanDibutyl phosphate affects expressionEXP 6480464di-n-butylphosphoric acid affects the expression of ZNF790 mRNACTDPMID:37042841
ZNF790Humanfolic acid decreases expressionISORGD:15569446480464Folic Acid results in decreased expression of ZFP790 mRNACTDPMID:25629700
ZNF790HumanGSK-J4 decreases expressionEXP 6480464GSK-J4 results in decreased expression of ZNF790 mRNACTDPMID:29301935
ZNF790Humanmanganese atom multiple interactionsEXP 6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
ZNF790Humanmanganese(0) multiple interactionsEXP 6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092

1 to 20 of 30 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF790Humanregulation of DNA-templated transcription involved_inIEAInterPro:IPR001909|InterPro:IPR036051150520179 InterProGO_REF:0000002
ZNF790Humanregulation of transcription by RNA polymerase II involved_inIBAMGI:1351476|MGI:1916754|MGI:2142347|MGI:2389445|MGI:3044162|PANTHER:PTN001225435|RGD:2967|RGD:2985|UniProtKB:P52737|UniProtKB:P52738|UniProtKB:Q96CS4|UniProtKB:Q96RE9|UniProtKB:Q9HCX3150520179 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF790Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
ZNF790Humannucleus is_active_inIBAMGI:105921|MGI:1328322|MGI:1353621|MGI:1916754|MGI:2142347|MGI:2143362|MGI:2389445|MGI:2444763|MGI:3040700|MGI:99206|PANTHER:PTN001225435|UniProtKB:O60765|UniProtKB:P17014|UniProtKB:P17020|UniProtKB:P17032|UniProtKB:Q09FC8|UniProtKB:Q15072|UniProtKB:Q16587|UniProtKB:Q3ZCT1|UniProtKB:Q5FWF6|UniProtKB:Q6ECI4|UniProtKB:Q7Z3V5|UniProtKB:Q86Y25|UniProtKB:Q8IZ26|UniProtKB:Q8N720|UniProtKB:Q8NDQ6|UniProtKB:Q8TF45|UniProtKB:Q8WV37|UniProtKB:Q96CS4|UniProtKB:Q96RE9|UniProtKB:Q9BX82|UniProtKB:Q9ULD5|UniProtKB:Q9Y2P7150520179 GO_CentralGO_REF:0000033
ZNF790Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF790HumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
ZNF790HumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAPANTHER:PTN001225435|UniProtKB:P35789|UniProtKB:P52738|UniProtKB:Q86Y25|UniProtKB:Q96RE9150520179 GO_CentralGO_REF:0000033
ZNF790Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
ZNF790HumanRNA polymerase II cis-regulatory region sequence-specific DNA binding enablesIBAMGI:1916754|PANTHER:PTN001225435150520179 GO_CentralGO_REF:0000033
ZNF790Humanzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043


#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:15489334   PMID:16344560   PMID:17207965   PMID:21044950   PMID:21873635  



ZNF790
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381936,817,428 - 36,850,792 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1936,817,428 - 36,850,787 (-)EnsemblGRCh38hg38GRCh38
GRCh371937,308,330 - 37,341,694 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361942,000,170 - 42,021,124 (-)NCBINCBI36Build 36hg18NCBI36
Celera1934,092,627 - 34,113,574 (-)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1933,778,026 - 33,810,213 (-)NCBIHuRef
CHM1_11937,309,707 - 37,342,149 (-)NCBICHM1_1
T2T-CHM13v2.01939,493,114 - 39,526,474 (-)NCBIT2T-CHM13v2.0
Zfp790
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39729,510,862 - 29,531,467 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl729,515,539 - 29,530,430 (+)EnsemblGRCm39 Ensembl
GRCm38729,811,437 - 29,832,042 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,816,114 - 29,831,005 (+)EnsemblGRCm38mm10GRCm38
MGSCv37730,601,091 - 30,617,061 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36729,524,879 - 29,539,700 (+)NCBIMGSCv36mm8
Celera724,371,589 - 24,390,090 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map717.26NCBI
Zfp790
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,166,366 - 94,180,766 (+)NCBIGRCr8
mRatBN7.2185,038,923 - 85,053,325 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,038,911 - 85,052,143 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0187,665,844 - 87,711,398 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera179,380,790 - 79,429,707 (+)NCBICelera
Cytogenetic Map1q21NCBI
ZNF790
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22042,939,749 - 42,993,059 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11944,824,868 - 44,877,788 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01933,762,837 - 33,811,305 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11942,956,493 - 43,004,721 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1942,980,457 - 42,988,373 (+)Ensemblpanpan1.1panPan2
ZNF790
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11115,694,742 - 115,722,622 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1115,702,397 - 115,721,845 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1115,104,560 - 115,132,877 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01116,299,197 - 116,327,580 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1116,307,099 - 116,326,959 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11115,869,444 - 115,897,764 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01115,488,344 - 115,516,662 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01116,538,941 - 116,567,287 (+)NCBIUU_Cfam_GSD_1.0
ZNF790
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1631,658,741 - 31,686,601 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl631,658,883 - 31,664,367 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660739,578,950 - 9,607,473 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.

.
Variants in ZNF790
54 total Variants

1 to 10 of 76 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 19q13.12(chr19:36439647-37163160)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051288]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051288]|See cases [RCV000051288] Chr19:36439647..37163160 [GRCh38]
Chr19:36930549..37654062 [GRCh37]
Chr19:41622389..42345902 [NCBI36]
Chr19:19q13.12
uncertain significance
NM_001242800.1(ZNF790):c.1542C>T (p.Ala514=) single nucleotide variant Malignant melanoma [RCV000072104] Chr19:36818802 [GRCh38]
Chr19:37309704 [GRCh37]
Chr19:42001544 [NCBI36]
Chr19:19q13.12
not provided
NM_001242800.1(ZNF790):c.521A>T (p.Glu174Val) single nucleotide variant Malignant melanoma [RCV000072105] Chr19:36819823 [GRCh38]
Chr19:37310725 [GRCh37]
Chr19:42002565 [NCBI36]
Chr19:19q13.12
not provided
NM_206894.3(ZNF790):c.764A>G (p.Lys255Arg) single nucleotide variant Malignant melanoma [RCV000063521] Chr19:36819580 [GRCh38]
Chr19:37310482 [GRCh37]
Chr19:42002322 [NCBI36]
Chr19:19q13.12
not provided
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31
pathogenic
GRCh38/hg38 19q12-13.13(chr19:29661858-38114723)x1 copy number loss See cases [RCV000135879] Chr19:29661858..38114723 [GRCh38]
Chr19:30152765..38605363 [GRCh37]
Chr19:34844605..43297203 [NCBI36]
Chr19:19q12-13.13
pathogenic
GRCh38/hg38 19q12-13.13(chr19:29671324-37902990)x1 copy number loss See cases [RCV000136794] Chr19:29671324..37902990 [GRCh38]
Chr19:30162231..38393630 [GRCh37]
Chr19:34854071..43085470 [NCBI36]
Chr19:19q12-13.13
pathogenic
GRCh37/hg19 19q13.12-13.2(chr19:36685995-38708166)x1 copy number loss Breast ductal adenocarcinoma [RCV000207200] Chr19:36685995..38708166 [GRCh37]
Chr19:19q13.12-13.2
uncertain significance
chr19:36674305-38652962 complex variant complex Breast ductal adenocarcinoma [RCV000207036] Chr19:36674305..38652962 [GRCh37]
Chr19:19q13.12-13.13
uncertain significance
GRCh37/hg19 19q13.12-13.13(chr19:36475577-38399402)x3 copy number gain See cases [RCV000240597] Chr19:36475577..38399402 [GRCh37]
Chr19:19q13.12-13.13
uncertain significance
1 to 10 of 76 rows

Predicted Target Of
Summary Value
Count of predictions:784
Count of miRNA genes:535
Interacting mature miRNAs:584
Transcripts:ENST00000356725, ENST00000525288, ENST00000527645, ENST00000528994, ENST00000586323
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human

G09801  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371937,309,121 - 37,309,253UniSTSGRCh37
Build 361942,000,961 - 42,001,093RGDNCBI36
Celera1934,093,418 - 34,093,550RGD
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map19q13.12UniSTS
HuRef1933,777,926 - 33,778,055UniSTS
D19S657E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371937,320,974 - 37,321,085UniSTSGRCh37
Build 361942,012,814 - 42,012,925RGDNCBI36
Celera1934,105,271 - 34,105,382RGD
Cytogenetic Map19q13.12UniSTS
HuRef1933,789,512 - 33,789,623UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2420 2788 2251 4969 1726 2346 6 624 1937 465 2265 7281 6460 50 3733 1 852 1738 1612 173 1


1 to 30 of 31 rows
RefSeq Transcripts NM_001242800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001242801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001242802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_206894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005258903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011526950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC008733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC020928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI808437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF132049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM473790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA819130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC307556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC308617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC324605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC352882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC377558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 31 rows

Ensembl Acc Id: ENST00000356725   ⟹   ENSP00000349161
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,817,428 - 36,838,387 (-)Ensembl
Ensembl Acc Id: ENST00000525288   ⟹   ENSP00000433389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,819,937 - 36,838,095 (-)Ensembl
Ensembl Acc Id: ENST00000527645   ⟹   ENSP00000434537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,823,365 - 36,838,027 (-)Ensembl
Ensembl Acc Id: ENST00000528994   ⟹   ENSP00000435944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,819,807 - 36,850,313 (-)Ensembl
Ensembl Acc Id: ENST00000586323   ⟹   ENSP00000467684
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,819,924 - 36,850,787 (-)Ensembl
Ensembl Acc Id: ENST00000613249   ⟹   ENSP00000480764
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,818,322 - 36,850,787 (-)Ensembl
Ensembl Acc Id: ENST00000614179   ⟹   ENSP00000480834
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,818,322 - 36,850,267 (-)Ensembl
Ensembl Acc Id: ENST00000615484   ⟹   ENSP00000478852
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1936,818,322 - 36,838,027 (-)Ensembl
RefSeq Acc Id: NM_001242800   ⟹   NP_001229729
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,850,792 (-)NCBI
GRCh371937,309,224 - 37,341,689 (-)ENTREZGENE
HuRef1933,778,026 - 33,810,213 (-)ENTREZGENE
CHM1_11937,309,707 - 37,342,149 (-)NCBI
T2T-CHM13v2.01939,493,114 - 39,526,474 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001242801   ⟹   NP_001229730
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,850,285 (-)NCBI
GRCh371937,309,224 - 37,341,689 (-)ENTREZGENE
HuRef1933,778,026 - 33,810,213 (-)ENTREZGENE
CHM1_11937,309,707 - 37,341,629 (-)NCBI
T2T-CHM13v2.01939,493,114 - 39,525,967 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001242802   ⟹   NP_001229731
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,027 (-)NCBI
GRCh371937,309,224 - 37,341,689 (-)ENTREZGENE
HuRef1933,778,026 - 33,810,213 (-)ENTREZGENE
CHM1_11937,309,707 - 37,329,411 (-)NCBI
T2T-CHM13v2.01939,493,114 - 39,513,707 (-)NCBI
Sequence:
RefSeq Acc Id: NM_206894   ⟹   NP_996777
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,387 (-)NCBI
GRCh371937,309,224 - 37,341,689 (-)ENTREZGENE
Build 361942,000,170 - 42,021,124 (-)NCBI Archive
Celera1934,092,627 - 34,113,574 (-)RGD
HuRef1933,778,026 - 33,810,213 (-)ENTREZGENE
CHM1_11937,309,707 - 37,329,766 (-)NCBI
T2T-CHM13v2.01939,493,114 - 39,514,065 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005258903   ⟹   XP_005258960
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,701 (-)NCBI
GRCh371937,309,224 - 37,341,689 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011526950   ⟹   XP_011525252
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,701 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047438798   ⟹   XP_047294754
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,823,992 (-)NCBI
RefSeq Acc Id: XM_047438799   ⟹   XP_047294755
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,701 (-)NCBI
RefSeq Acc Id: XM_047438800   ⟹   XP_047294756
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,847,113 (-)NCBI
RefSeq Acc Id: XM_047438801   ⟹   XP_047294757
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381936,817,428 - 36,838,387 (-)NCBI
RefSeq Acc Id: XM_054320953   ⟹   XP_054176928
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,499,672 (-)NCBI
RefSeq Acc Id: XM_054320954   ⟹   XP_054176929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,514,386 (-)NCBI
RefSeq Acc Id: XM_054320955   ⟹   XP_054176930
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,514,387 (-)NCBI
RefSeq Acc Id: XM_054320956   ⟹   XP_054176931
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,514,368 (-)NCBI
RefSeq Acc Id: XM_054320957   ⟹   XP_054176932
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,522,794 (-)NCBI
RefSeq Acc Id: XM_054320958   ⟹   XP_054176933
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01939,493,114 - 39,514,033 (-)NCBI
1 to 5 of 24 rows
1 to 5 of 24 rows
RefSeq Acc Id: NP_996777   ⟸   NM_206894
- UniProtKB: Q6PG37 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001229729   ⟸   NM_001242800
- UniProtKB: Q6PG37 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001229730   ⟸   NM_001242801
- UniProtKB: Q6PG37 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001229731   ⟸   NM_001242802
- UniProtKB: Q6PG37 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005258960   ⟸   XM_005258903
- Peptide Label: isoform X2
- UniProtKB: Q6PG37 (UniProtKB/Swiss-Prot)
- Sequence:
C2H2-type   KRAB

Name Modeler Protein Id AA Range Protein Structure
AF-Q6PG37-F1-model_v2 AlphaFold Q6PG37 1-636 view protein structure

RGD ID:6796428
Promoter ID:HG_KWN:29756
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_206894
Position:
Human AssemblyChrPosition (strand)Source
Build 361942,020,691 - 42,021,191 (-)MPROMDB


1 to 39 of 39 rows
Database
Acc Id
Source(s)
COSMIC ZNF790 COSMIC
Ensembl Genes ENSG00000197863 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000356725 ENTREZGENE
  ENST00000356725.9 UniProtKB/Swiss-Prot
  ENST00000613249 ENTREZGENE
  ENST00000613249.4 UniProtKB/Swiss-Prot
  ENST00000614179 ENTREZGENE
  ENST00000614179.4 UniProtKB/Swiss-Prot
  ENST00000615484 ENTREZGENE
  ENST00000615484.4 UniProtKB/Swiss-Prot
Gene3D-CATH 6.10.140.140 UniProtKB/Swiss-Prot
  Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000197863 GTEx
HGNC ID HGNC:33114 ENTREZGENE
Human Proteome Map ZNF790 Human Proteome Map
InterPro KRAB UniProtKB/Swiss-Prot
  KRAB_dom_sf UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:388536 UniProtKB/Swiss-Prot
NCBI Gene 388536 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN 566 UniProtKB/Swiss-Prot
Pfam KRAB UniProtKB/Swiss-Prot
  zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA162410507 PharmGKB
PROSITE KRAB UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART KRAB UniProtKB/Swiss-Prot
  ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF109640 UniProtKB/Swiss-Prot
  SSF57667 UniProtKB/Swiss-Prot
UniProt B4DMI3_HUMAN UniProtKB/TrEMBL
  E9PL27_HUMAN UniProtKB/TrEMBL
  E9PQ03_HUMAN UniProtKB/TrEMBL
  E9PRR6_HUMAN UniProtKB/TrEMBL
  K7EQ58_HUMAN UniProtKB/TrEMBL
  Q6PG37 ENTREZGENE, UniProtKB/Swiss-Prot
1 to 39 of 39 rows