Zfp420 (zinc finger protein 420) - Rat Genome Database

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Gene: Zfp420 (zinc finger protein 420) Mus musculus
Analyze
Symbol: Zfp420
Name: zinc finger protein 420
RGD ID: 1621327
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within blastocyst hatching. Predicted to be active in nucleus. Is expressed in several structures, including brain; cardiovascular system; genitourinary system; gut; and respiratory system. Orthologous to human ZNF420 (zinc finger protein 420).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B230119D13; B230312I18Rik; mszf59-1; mszf70
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39729,559,392 - 29,576,727 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl729,559,404 - 29,576,717 (+)EnsemblGRCm39 Ensembl
GRCm38729,859,967 - 29,877,302 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,859,979 - 29,877,292 (+)EnsemblGRCm38mm10GRCm38
MGSCv37730,644,998 - 30,662,321 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36729,568,768 - 29,586,062 (+)NCBIMGSCv36mm8
Celera724,427,359 - 24,448,620 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map717.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mousebreast ductal carcinoma  ISOZNF420 (Homo sapiens)8554872ClinVar Annotator: match by term: Ductal breast carcinomaClinVar 
Zfp420Mouseinvasive ductal carcinoma  ISOZNF420 (Homo sapiens)8554872ClinVar Annotator: match by term: Breast cancer and invasive ductalClinVar 

1 to 20 of 33 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mouse(1->4)-beta-D-glucan multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ZFP420 mRNACTDPMID:36331819
Zfp420Mouse17beta-estradiol increases expressionISOZNF420 (Homo sapiens)6480464Estradiol results in increased expression of ZNF420 mRNACTDPMID:36581016
Zfp420Mouse17beta-estradiol decreases expressionISOZfp420 (Rattus norvegicus)6480464Estradiol results in decreased expression of ZFP420 mRNACTDPMID:35192832
Zfp420Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOZfp420 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ZFP420 mRNACTDPMID:33387578
Zfp420Mouse3,4-methylenedioxymethamphetamine decreases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of ZFP420 mRNACTDPMID:26251327
Zfp420Mouseamiodarone increases expressionISOZNF420 (Homo sapiens)6480464Amiodarone results in increased expression of ZNF420 mRNACTDPMID:19774075
Zfp420Mousearsenite(3-) decreases methylationISOZNF420 (Homo sapiens)6480464arsenite results in decreased methylation of ZNF420 promoterCTDPMID:23974009
Zfp420Mousebenzo[a]pyrene decreases methylationISOZNF420 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of ZNF420 promoterCTDPMID:27901495
Zfp420Mousebis(2-ethylhexyl) phthalate increases expressionEXP 6480464Diethylhexyl Phthalate results in increased expression of ZFP420 mRNACTDPMID:34319233
Zfp420Mousecadmium dichloride decreases expressionISOZNF420 (Homo sapiens)6480464Cadmium Chloride results in decreased expression of ZNF420 mRNACTDPMID:38568856
Zfp420Mousecrocidolite asbestos decreases expressionEXP 6480464Asbestos and Crocidolite results in decreased expression of ZFP420 mRNACTDPMID:29279043
Zfp420Mousediclofenac decreases expressionEXP 6480464Diclofenac results in decreased expression of ZFP420 mRNACTDPMID:35537566
Zfp420Mouseethyl methanesulfonate increases expressionISOZNF420 (Homo sapiens)6480464Ethyl Methanesulfonate results in increased expression of ZNF420 mRNACTDPMID:23649840
Zfp420Mouseformaldehyde decreases expressionISOZNF420 (Homo sapiens)6480464Formaldehyde results in decreased expression of ZNF420 mRNACTDPMID:20655997
Zfp420Mousegentamycin decreases expressionISOZfp420 (Rattus norvegicus)6480464Gentamicins results in decreased expression of ZFP420 mRNACTDPMID:33387578
Zfp420Mouseisoflurane decreases methylationEXP 6480464Isoflurane results in decreased methylation of ZNF420 mRNACTDPMID:35249202
Zfp420Mousemethyl methanesulfonate increases expressionISOZNF420 (Homo sapiens)6480464Methyl Methanesulfonate results in increased expression of ZNF420 mRNACTDPMID:23649840
Zfp420Mouseoxybenzone increases expressionISOZNF420 (Homo sapiens)6480464oxybenzone results in increased expression of ZNF420 mRNACTDPMID:36581016
Zfp420Mouseparacetamol decreases expressionISOZfp420 (Rattus norvegicus)6480464Acetaminophen results in decreased expression of ZFP420 mRNACTDPMID:33387578
Zfp420Mouseperfluorooctane-1-sulfonic acid multiple interactionsEXP 6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ZFP420 mRNA and [perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of ZFP420 mRNACTDPMID:36331819

1 to 20 of 33 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mouseblastocyst hatching acts_upstream_of_or_withinIMP 2290270 PMID:27869233MGIPMID:27869233
Zfp420Mouseregulation of transcription by RNA polymerase II involved_inIBAPANTHER:PTN001225435 more ...2290270 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mousenucleus is_active_inIBAPANTHER:PTN001225435 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mousep53 signaling pathway   ISOZNF420 (Homo sapiens)8662965 RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp420Mouseincreased lymphocyte cell number  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Transcriptional regulation by p53. Beckerman R and Prives C, Cold Spring Harb Perspect Biol. 2010 Aug;2(8):a000935. doi: 10.1101/cshperspect.a000935. Epub 2010 Apr 28.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:9630514   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15618518   PMID:16141072   PMID:16141073   PMID:17967808   PMID:20059953  
PMID:21267068   PMID:21873635   PMID:24194600   PMID:27869233   PMID:38355793  



Zfp420
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39729,559,392 - 29,576,727 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl729,559,404 - 29,576,717 (+)EnsemblGRCm39 Ensembl
GRCm38729,859,967 - 29,877,302 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,859,979 - 29,877,292 (+)EnsemblGRCm38mm10GRCm38
MGSCv37730,644,998 - 30,662,321 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36729,568,768 - 29,586,062 (+)NCBIMGSCv36mm8
Celera724,427,359 - 24,448,620 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map717.26NCBI
ZNF420
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381937,007,902 - 37,130,368 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1937,007,857 - 37,130,368 (+)EnsemblGRCh38hg38GRCh38
GRCh371937,569,124 - 37,621,270 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361942,261,222 - 42,312,502 (+)NCBINCBI36Build 36hg18NCBI36
Celera1934,353,626 - 34,404,901 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1934,038,547 - 34,089,829 (+)NCBIHuRef
CHM1_11937,569,842 - 37,621,136 (+)NCBICHM1_1
T2T-CHM13v2.01939,682,827 - 39,805,340 (+)NCBIT2T-CHM13v2.0
Zfp420
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,259,715 - 94,271,102 (+)NCBIGRCr8
mRatBN7.2185,092,810 - 85,143,682 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,132,520 - 85,143,679 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0188,204,836 - 88,216,548 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,206,813 - 88,216,556 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl187,790,104 - 87,801,872 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,542,035 - 88,544,156 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0189,693,213 - 89,725,397 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4184,887,188 - 84,899,697 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera179,468,994 - 79,519,169 (+)NCBICelera
Cytogenetic Map1q21NCBI
ZNF420
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22043,219,072 - 43,275,533 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11945,105,390 - 45,159,576 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01934,039,699 - 34,093,881 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11942,674,723 - 42,727,746 (-)NCBIpanpan1.1PanPan1.1panPan2
LOC102157134
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11115,588,509 - 115,614,040 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1114,999,224 - 115,024,695 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01116,193,537 - 116,218,847 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11115,764,174 - 115,789,367 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01115,382,763 - 115,408,315 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01116,433,313 - 116,458,845 (-)NCBIUU_Cfam_GSD_1.0
Znf420
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934912,173,387 - 12,197,258 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936801338,743 - 403,206 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC102164547
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1646,479,566 - 46,530,528 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2641,950,032 - 41,993,016 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF420
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1631,849,382 - 31,893,981 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660739,771,970 - 9,816,864 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.

.
Variants in Zfp420
1205 total Variants

Predicted Target Of
Summary Value
Count of predictions:569
Count of miRNA genes:368
Interacting mature miRNAs:419
Transcripts:ENSMUST00000057652, ENSMUST00000074876, ENSMUST00000130272, ENSMUST00000145952, ENSMUST00000148489
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse

1 to 10 of 24 rows
BB315646  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38729,876,295 - 29,876,416UniSTSGRCm38
MGSCv37730,661,314 - 30,661,435UniSTSGRCm37
Cytogenetic Map7B1UniSTS
Whitehead/MRC_RHX731.76UniSTS
D7Mit210  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38729,863,922 - 29,864,009UniSTSGRCm38
MGSCv37730,648,941 - 30,649,028UniSTSGRCm37
Celera726,854,221 - 26,854,308UniSTS
Cytogenetic Map7B1UniSTS
cM Map711.0UniSTS
Whitehead Genetic710.9UniSTS
Whitehead/MRC_RH7408.28UniSTS






1 to 21 of 21 rows
RefSeq Transcripts NM_001364618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB010316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB010367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC149283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY069284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY259697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD807409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 21 of 21 rows

Ensembl Acc Id: ENSMUST00000057652   ⟹   ENSMUSP00000056077
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl729,559,466 - 29,576,252 (+)Ensembl
GRCm38.p6 Ensembl729,860,041 - 29,876,827 (+)Ensembl
Ensembl Acc Id: ENSMUST00000074876   ⟹   ENSMUSP00000074417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl729,559,404 - 29,575,930 (+)Ensembl
GRCm38.p6 Ensembl729,859,979 - 29,876,505 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl729,571,949 - 29,573,961 (+)Ensembl
GRCm38.p6 Ensembl729,872,524 - 29,874,536 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl729,559,436 - 29,576,717 (+)Ensembl
GRCm38.p6 Ensembl729,860,011 - 29,877,292 (+)Ensembl
Ensembl Acc Id: ENSMUST00000148489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl729,559,429 - 29,562,552 (+)Ensembl
GRCm38.p6 Ensembl729,860,004 - 29,863,127 (+)Ensembl
RefSeq Acc Id: NM_001364618   ⟹   NP_001351547
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,437 - 29,576,721 (+)NCBI
GRCm38729,860,012 - 29,877,296 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364619   ⟹   NP_001351548
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,437 - 29,576,721 (+)NCBI
GRCm38729,860,012 - 29,877,296 (+)NCBI
Sequence:
RefSeq Acc Id: NM_172740   ⟹   NP_766328
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,404 - 29,576,727 (+)NCBI
GRCm38729,859,979 - 29,877,302 (+)NCBI
MGSCv37730,644,998 - 30,662,321 (+)RGD
Celera724,427,359 - 24,448,620 (+)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011250536   ⟹   XP_011248838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,392 - 29,576,721 (+)NCBI
GRCm38729,859,967 - 29,877,296 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011250538   ⟹   XP_011248840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,572,365 - 29,576,721 (+)NCBI
GRCm38729,872,940 - 29,877,296 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152953   ⟹   XP_036008846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,392 - 29,568,688 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152954   ⟹   XP_036008847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,392 - 29,568,688 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152955   ⟹   XP_036008848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,392 - 29,568,688 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036152956   ⟹   XP_036008849
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39729,559,392 - 29,568,688 (+)NCBI
Sequence:
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_766328   ⟸   NM_172740
- UniProtKB: Q7TMN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248838   ⟸   XM_011250536
- Peptide Label: isoform X1
- UniProtKB: Q7TMN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248840   ⟸   XM_011250538
- Peptide Label: isoform X1
- UniProtKB: Q7TMN8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001351547   ⟸   NM_001364618
- UniProtKB: Q7TMN8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351548   ⟸   NM_001364619
- UniProtKB: Q7TMN8 (UniProtKB/TrEMBL)
C2H2-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q7TMN8-F1-model_v2 AlphaFold Q7TMN8 1-578 view protein structure

RGD ID:6892558
Promoter ID:EPDNEW_M9729
Type:initiation region
Name:Zfp420_1
Description:Mus musculus zinc finger protein 420 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38729,860,012 - 29,860,072EPDNEW
RGD ID:6842419
Promoter ID:MM_KWN:49744
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_172740,   OTTMUST00000053546,   OTTMUST00000053547,   UC009GCK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36730,644,891 - 30,645,391 (+)MPROMDB


1 to 31 of 31 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000058402 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000057652 ENTREZGENE
  ENSMUST00000057652.7 UniProtKB/TrEMBL
  ENSMUST00000074876 ENTREZGENE
  ENSMUST00000074876.13 UniProtKB/TrEMBL
  ENSMUST00000145952 ENTREZGENE
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Ikaros_C2H2-ZF UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
MGD MGI:2444666 ENTREZGENE
NCBI Gene 233058 ENTREZGENE
PANTHER ZFP14 ZINC FINGER PROTEIN-RELATED UniProtKB/TrEMBL
  ZFP2 ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER AND BTB DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 529 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen Zfp420 PhenoGen
PRINTS ZINCFINGER UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt O88221_MOUSE UniProtKB/TrEMBL
  O88261_MOUSE UniProtKB/TrEMBL
  Q7TMN8 ENTREZGENE, UniProtKB/TrEMBL
  Q8BLA2_MOUSE UniProtKB/TrEMBL
  Q8BLE1_MOUSE UniProtKB/TrEMBL
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