ZNF470 (zinc finger protein 470) - Rat Genome Database

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Gene: ZNF470 (zinc finger protein 470) Homo sapiens
Analyze
Symbol: ZNF470
Name: zinc finger protein 470
RGD ID: 1603830
HGNC Page HGNC:22220
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nuclear body.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: chondrogenesis zinc finger protein 1; CZF-1; FLJ26175; FLJ26846
RGD Orthologs
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: AC010642.1   LOC646629  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381956,567,468 - 56,582,894 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1956,567,468 - 56,588,911 (+)EnsemblGRCh38hg38GRCh38
GRCh371957,078,837 - 57,094,262 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361961,770,702 - 61,786,074 (+)NCBINCBI36Build 36hg18NCBI36
Celera1954,121,878 - 54,137,251 (+)NCBICelera
Cytogenetic Map19q13.43NCBI
HuRef1953,388,817 - 53,404,276 (+)NCBIHuRef
CHM1_11957,072,471 - 57,087,859 (+)NCBICHM1_1
T2T-CHM13v2.01959,661,809 - 59,677,296 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nuclear body  (IDA)
nucleoplasm  (IDA)
nucleus  (IBA,IEA)

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:15057824   PMID:15302581   PMID:16344560   PMID:18029348   PMID:21873635   PMID:23251661   PMID:25437307   PMID:32393512  


Genomics

Comparative Map Data
ZNF470
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381956,567,468 - 56,582,894 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1956,567,468 - 56,588,911 (+)EnsemblGRCh38hg38GRCh38
GRCh371957,078,837 - 57,094,262 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361961,770,702 - 61,786,074 (+)NCBINCBI36Build 36hg18NCBI36
Celera1954,121,878 - 54,137,251 (+)NCBICelera
Cytogenetic Map19q13.43NCBI
HuRef1953,388,817 - 53,404,276 (+)NCBIHuRef
CHM1_11957,072,471 - 57,087,859 (+)NCBICHM1_1
T2T-CHM13v2.01959,661,809 - 59,677,296 (+)NCBIT2T-CHM13v2.0
Zfp470
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81100,200,601 - 100,248,567 (+)NCBIGRCr8
mRatBN7.2191,063,905 - 91,111,883 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl191,087,361 - 91,112,065 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0194,788,450 - 94,812,942 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0196,488,651 - 96,498,687 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera185,417,907 - 85,442,414 (+)NCBICelera
Cytogenetic Map1q21NCBI
Znf470
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955567277,846 - 290,201 (-)NCBIChiLan1.0ChiLan1.0
ZNF470
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22062,854,357 - 62,869,829 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11964,646,331 - 64,667,394 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01953,592,017 - 53,613,467 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11962,385,934 - 62,401,049 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1962,387,675 - 62,406,415 (+)Ensemblpanpan1.1panPan2
Znf470
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093491,137,262 - 1,175,119 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936882336,887 - 338,302 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936882305,130 - 338,892 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF470
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl660,906,872 - 60,926,917 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1 Ensembl660,889,358 - 60,903,636 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1 Ensembl660,857,442 - 60,881,008 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1660,857,063 - 60,903,923 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2656,178,385 - 56,194,755 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF470
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1649,103,478 - 49,114,963 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660452,116,586 - 2,130,572 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in ZNF470
40 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19q13.33-13.43(chr19:50191219-58535818)x3 copy number gain See cases [RCV000050883] Chr19:50191219..58535818 [GRCh38]
Chr19:50694476..59047185 [GRCh37]
Chr19:55386288..63738997 [NCBI36]
Chr19:19q13.33-13.43		 pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47929575-58572206)x3 copy number gain See cases [RCV000052915] Chr19:47929575..58572206 [GRCh38]
Chr19:48432832..59083573 [GRCh37]
Chr19:53124644..63775385 [NCBI36]
Chr19:19q13.33-13.43		 pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:49907832-58557889)x3 copy number gain See cases [RCV000052925] Chr19:49907832..58557889 [GRCh38]
Chr19:50411089..59069256 [GRCh37]
Chr19:55102901..63761068 [NCBI36]
Chr19:19q13.33-13.43		 pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:51141518-58539965)x3 copy number gain See cases [RCV000052926] Chr19:51141518..58539965 [GRCh38]
Chr19:51644775..59051332 [GRCh37]
Chr19:56336587..63743144 [NCBI36]
Chr19:19q13.41-13.43		 pathogenic
GRCh38/hg38 19q13.43(chr19:56363208-58581203)x3 copy number gain See cases [RCV000052927] Chr19:56363208..58581203 [GRCh38]
Chr19:56874577..59092570 [GRCh37]
Chr19:61566389..63784382 [NCBI36]
Chr19:19q13.43		 pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47908540-58539965)x3 copy number gain See cases [RCV000052914] Chr19:47908540..58539965 [GRCh38]
Chr19:48411797..59051332 [GRCh37]
Chr19:53103609..63743144 [NCBI36]
Chr19:19q13.33-13.43		 pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:52612432-58581203)x3 copy number gain See cases [RCV000134174] Chr19:52612432..58581203 [GRCh38]
Chr19:53115685..59092570 [GRCh37]
Chr19:57807497..63784382 [NCBI36]
Chr19:19q13.41-13.43		 pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:52955056-58581203)x3 copy number gain See cases [RCV000134139] Chr19:52955056..58581203 [GRCh38]
Chr19:53458309..59092570 [GRCh37]
Chr19:58150121..63784382 [NCBI36]
Chr19:19q13.41-13.43		 pathogenic
GRCh38/hg38 19q13.42-13.43(chr19:55550939-57031576)x1 copy number loss See cases [RCV000135287] Chr19:55550939..57031576 [GRCh38]
Chr19:56062305..57542944 [GRCh37]
Chr19:60754117..62234756 [NCBI36]
Chr19:19q13.42-13.43		 likely pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:50152520-58581203)x3 copy number gain See cases [RCV000135843] Chr19:50152520..58581203 [GRCh38]
Chr19:50655777..59092570 [GRCh37]
Chr19:55347589..63784382 [NCBI36]
Chr19:19q13.33-13.43		 pathogenic
GRCh38/hg38 19q13.42-13.43(chr19:55048514-56972458)x3 copy number gain See cases [RCV000138139] Chr19:55048514..56972458 [GRCh38]
Chr19:55595687..57483826 [GRCh37]
Chr19:60251694..62175638 [NCBI36]
Chr19:19q13.42-13.43		 likely pathogenic
GRCh38/hg38 19q13.41-13.43(chr19:52143873-58445521)x3 copy number gain See cases [RCV000142008] Chr19:52143873..58445521 [GRCh38]
Chr19:52647126..58956888 [GRCh37]
Chr19:57338938..63648700 [NCBI36]
Chr19:19q13.41-13.43		 pathogenic
GRCh38/hg38 19q13.43(chr19:56353449-58445521)x3 copy number gain See cases [RCV000141900] Chr19:56353449..58445521 [GRCh38]
Chr19:56864818..58956888 [GRCh37]
Chr19:61556630..63648700 [NCBI36]
Chr19:19q13.43		 uncertain significance
GRCh38/hg38 19q13.42-13.43(chr19:55037146-56982033)x3 copy number gain See cases [RCV000142245] Chr19:55037146..56982033 [GRCh38]
Chr19:55548514..57493401 [GRCh37]
Chr19:60240326..62185213 [NCBI36]
Chr19:19q13.42-13.43		 uncertain significance
GRCh37/hg19 19q13.42-13.43(chr19:56200298-57654005)x1 copy number loss Breast ductal adenocarcinoma [RCV000207313] Chr19:56200298..57654005 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
chr19:56133299..57648277 complex variant complex Breast ductal adenocarcinoma [RCV000207023] Chr19:56133299..57648277 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
GRCh37/hg19 19q13.33-13.43(chr19:50489390-59095359)x3 copy number gain See cases [RCV000445925] Chr19:50489390..59095359 [GRCh37]
Chr19:19q13.33-13.43		 pathogenic
GRCh37/hg19 19q13.42-13.43(chr19:54344821-58956888)x3 copy number gain See cases [RCV000448186] Chr19:54344821..58956888 [GRCh37]
Chr19:19q13.42-13.43		 pathogenic
GRCh37/hg19 19q13.43(chr19:56874577-57183789)x3 copy number gain See cases [RCV000448660] Chr19:56874577..57183789 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.43(chr19:56706500-58956888)x3 copy number gain See cases [RCV000512396] Chr19:56706500..58956888 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.240C>G (p.Asp80Glu) single nucleotide variant Inborn genetic diseases [RCV003308563] Chr19:56574690 [GRCh38]
Chr19:57086059 [GRCh37]
Chr19:19q13.43		 likely benign
NM_001001668.4(ZNF470):c.82G>A (p.Val28Met) single nucleotide variant Inborn genetic diseases [RCV003268957] Chr19:56574415 [GRCh38]
Chr19:57085784 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
GRCh37/hg19 19q13.42-13.43(chr19:55844155-57408007)x3 copy number gain See cases [RCV000511123] Chr19:55844155..57408007 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
NM_001001668.4(ZNF470):c.146A>T (p.Lys49Met) single nucleotide variant Inborn genetic diseases [RCV003265182] Chr19:56574479 [GRCh38]
Chr19:57085848 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.42-13.43(chr19:56212463-57191708)x3 copy number gain See cases [RCV000510179] Chr19:56212463..57191708 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic|uncertain significance
GRCh37/hg19 19q13.42-13.43(chr19:55549385-57489784)x3 copy number gain See cases [RCV000510290] Chr19:55549385..57489784 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
GRCh37/hg19 19q13.43(chr19:56565455-57401997)x1 copy number loss not provided [RCV000684087] Chr19:56565455..57401997 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.42-13.43(chr19:54196216-58759679)x3 copy number gain not provided [RCV000684095] Chr19:54196216..58759679 [GRCh37]
Chr19:19q13.42-13.43		 pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
GRCh37/hg19 19q13.33-13.43(chr19:50740074-59097160)x3 copy number gain not provided [RCV000740208] Chr19:50740074..59097160 [GRCh37]
Chr19:19q13.33-13.43		 pathogenic
NM_001001668.4(ZNF470):c.1563T>G (p.Asn521Lys) single nucleotide variant Inborn genetic diseases [RCV003289647] Chr19:56577992 [GRCh38]
Chr19:57089360 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.196A>G (p.Ile66Val) single nucleotide variant Inborn genetic diseases [RCV003291310] Chr19:56574646 [GRCh38]
Chr19:57086015 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1942C>T (p.Pro648Ser) single nucleotide variant Inborn genetic diseases [RCV003292755] Chr19:56578371 [GRCh38]
Chr19:57089739 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1079G>A (p.Arg360Lys) single nucleotide variant Inborn genetic diseases [RCV003273775] Chr19:56577508 [GRCh38]
Chr19:57088876 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.250A>G (p.Ile84Val) single nucleotide variant Inborn genetic diseases [RCV003241818] Chr19:56574700 [GRCh38]
Chr19:57086069 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.43(chr19:56788816-57277655)x3 copy number gain not provided [RCV001007062] Chr19:56788816..57277655 [GRCh37]
Chr19:19q13.43		 likely benign|uncertain significance
GRCh37/hg19 19q13.33-13.43(chr19:48463931-57095254)x3 copy number gain not provided [RCV001259944] Chr19:48463931..57095254 [GRCh37]
Chr19:19q13.33-13.43		 pathogenic
GRCh37/hg19 19q13.43(chr19:56332200-57126728) copy number gain not specified [RCV002052691] Chr19:56332200..57126728 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.266A>G (p.Asn89Ser) single nucleotide variant Inborn genetic diseases [RCV002946165] Chr19:56574716 [GRCh38]
Chr19:57086085 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.278G>A (p.Cys93Tyr) single nucleotide variant Inborn genetic diseases [RCV002906499] Chr19:56574728 [GRCh38]
Chr19:57086097 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1163G>A (p.Arg388Gln) single nucleotide variant Inborn genetic diseases [RCV002682917] Chr19:56577592 [GRCh38]
Chr19:57088960 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.874G>C (p.Ala292Pro) single nucleotide variant Inborn genetic diseases [RCV002905551] Chr19:56577303 [GRCh38]
Chr19:57088671 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.585G>A (p.Met195Ile) single nucleotide variant Inborn genetic diseases [RCV002776655] Chr19:56577014 [GRCh38]
Chr19:57088382 [GRCh37]
Chr19:19q13.43		 likely benign
NM_001001668.4(ZNF470):c.2081A>C (p.His694Pro) single nucleotide variant Inborn genetic diseases [RCV002783755] Chr19:56578510 [GRCh38]
Chr19:57089878 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1436A>G (p.Lys479Arg) single nucleotide variant Inborn genetic diseases [RCV002822423] Chr19:56577865 [GRCh38]
Chr19:57089233 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.67G>A (p.Val23Met) single nucleotide variant Inborn genetic diseases [RCV002781717] Chr19:56574400 [GRCh38]
Chr19:57085769 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.324C>G (p.Asn108Lys) single nucleotide variant Inborn genetic diseases [RCV002868963] Chr19:56576753 [GRCh38]
Chr19:57088121 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.127G>T (p.Ala43Ser) single nucleotide variant Inborn genetic diseases [RCV002784416] Chr19:56574460 [GRCh38]
Chr19:57085829 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.623G>A (p.Ser208Asn) single nucleotide variant Inborn genetic diseases [RCV002850008] Chr19:56577052 [GRCh38]
Chr19:57088420 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.973G>A (p.Ala325Thr) single nucleotide variant Inborn genetic diseases [RCV002955374] Chr19:56577402 [GRCh38]
Chr19:57088770 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.2080C>G (p.His694Asp) single nucleotide variant Inborn genetic diseases [RCV002803439] Chr19:56578509 [GRCh38]
Chr19:57089877 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.762A>C (p.Lys254Asn) single nucleotide variant Inborn genetic diseases [RCV002850311] Chr19:56577191 [GRCh38]
Chr19:57088559 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1408C>T (p.Leu470Phe) single nucleotide variant Inborn genetic diseases [RCV002827552] Chr19:56577837 [GRCh38]
Chr19:57089205 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.464A>G (p.His155Arg) single nucleotide variant Inborn genetic diseases [RCV002713103] Chr19:56576893 [GRCh38]
Chr19:57088261 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1633G>A (p.Ala545Thr) single nucleotide variant Inborn genetic diseases [RCV002941559] Chr19:56578062 [GRCh38]
Chr19:57089430 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.979C>G (p.Leu327Val) single nucleotide variant Inborn genetic diseases [RCV002965120] Chr19:56577408 [GRCh38]
Chr19:57088776 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1736A>G (p.Tyr579Cys) single nucleotide variant Inborn genetic diseases [RCV002669356] Chr19:56578165 [GRCh38]
Chr19:57089533 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1223A>T (p.Asp408Val) single nucleotide variant Inborn genetic diseases [RCV002965382] Chr19:56577652 [GRCh38]
Chr19:57089020 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.632C>T (p.Thr211Ile) single nucleotide variant Inborn genetic diseases [RCV002674331] Chr19:56577061 [GRCh38]
Chr19:57088429 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1897C>T (p.Arg633Cys) single nucleotide variant Inborn genetic diseases [RCV002964189] Chr19:56578326 [GRCh38]
Chr19:57089694 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.112G>C (p.Glu38Gln) single nucleotide variant Inborn genetic diseases [RCV002944446] Chr19:56574445 [GRCh38]
Chr19:57085814 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.208G>A (p.Asp70Asn) single nucleotide variant Inborn genetic diseases [RCV002652858] Chr19:56574658 [GRCh38]
Chr19:57086027 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1666C>G (p.Gln556Glu) single nucleotide variant Inborn genetic diseases [RCV002677130] Chr19:56578095 [GRCh38]
Chr19:57089463 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1721T>A (p.Phe574Tyr) single nucleotide variant Inborn genetic diseases [RCV002677923] Chr19:56578150 [GRCh38]
Chr19:57089518 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.260G>A (p.Gly87Glu) single nucleotide variant Inborn genetic diseases [RCV003256742] Chr19:56574710 [GRCh38]
Chr19:57086079 [GRCh37]
Chr19:19q13.43		 likely benign
NM_001001668.4(ZNF470):c.767A>G (p.Tyr256Cys) single nucleotide variant Inborn genetic diseases [RCV003214865] Chr19:56577196 [GRCh38]
Chr19:57088564 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.463C>T (p.His155Tyr) single nucleotide variant Inborn genetic diseases [RCV003309300] Chr19:56576892 [GRCh38]
Chr19:57088260 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.157T>A (p.Leu53Ile) single nucleotide variant Inborn genetic diseases [RCV003356965] Chr19:56574490 [GRCh38]
Chr19:57085859 [GRCh37]
Chr19:19q13.43		 uncertain significance
NM_001001668.4(ZNF470):c.1627G>A (p.Gly543Ser) single nucleotide variant Inborn genetic diseases [RCV003366159] Chr19:56578056 [GRCh38]
Chr19:57089424 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.33-13.43(chr19:49625130-57647352)x3 copy number gain not provided [RCV003485200] Chr19:49625130..57647352 [GRCh37]
Chr19:19q13.33-13.43		 likely pathogenic
GRCh37/hg19 19q13.43(chr19:56949121-57419586)x3 copy number gain not provided [RCV003485202] Chr19:56949121..57419586 [GRCh37]
Chr19:19q13.43		 uncertain significance
GRCh37/hg19 19q13.42-13.43(chr19:56080158-57672397)x1 copy number loss not specified [RCV003986104] Chr19:56080158..57672397 [GRCh37]
Chr19:19q13.42-13.43		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3536
Count of miRNA genes:1042
Interacting mature miRNAs:1265
Transcripts:ENST00000330619, ENST00000391709, ENST00000594953, ENST00000601059, ENST00000601579, ENST00000601902
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
G65720  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371957,093,772 - 57,093,917UniSTSGRCh37
Build 361961,785,584 - 61,785,729RGDNCBI36
Celera1954,136,761 - 54,136,906RGD
Cytogenetic Map19q13.43UniSTS
HuRef1953,403,786 - 53,403,931UniSTS
STS-AA001125  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371957,094,025 - 57,094,214UniSTSGRCh37
Build 361961,785,837 - 61,786,026RGDNCBI36
Celera1954,137,014 - 54,137,203RGD
Cytogenetic Map19q13.43UniSTS
HuRef1953,404,039 - 53,404,228UniSTS
GeneMap99-GB4 RH Map19288.05UniSTS
L18426  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10p11UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map17q21-q22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map12q24.1-q24.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p24.2UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map6q25.1-q26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.1UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map1q41-q42.2UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map11p11.11UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map21q22.1UniSTS
Cytogenetic Map4q25-q27UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map21q21.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map12p12.3UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map1p13-p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map10q21.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map20p11.21UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map14q22-q24UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map10q11UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map12q21.31UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map9p21.1UniSTS
D1S1361  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p21.1-p12.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map17q21UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1 5 2 3 37 3 24 11
Low 2339 2153 1665 566 1101 408 3860 1646 3685 385 1386 1546 167 1 1202 2329 5 2
Below cutoff 82 836 59 56 831 55 493 545 12 29 44 54 7 2 459

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001001668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017026801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA977233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK130356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY484591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC136762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC142627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX641145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA412738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF511283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000330619   ⟹   ENSP00000333223
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,567,468 - 56,582,894 (+)Ensembl
RefSeq Acc Id: ENST00000391709   ⟹   ENSP00000375590
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,570,175 - 56,582,893 (+)Ensembl
RefSeq Acc Id: ENST00000594953   ⟹   ENSP00000472891
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,574,647 - 56,582,895 (+)Ensembl
RefSeq Acc Id: ENST00000601059
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,567,649 - 56,588,406 (+)Ensembl
RefSeq Acc Id: ENST00000601579
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,586,635 - 56,588,908 (+)Ensembl
RefSeq Acc Id: ENST00000601902   ⟹   ENSP00000471379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1956,567,526 - 56,588,911 (+)Ensembl
RefSeq Acc Id: NM_001001668   ⟹   NP_001001668
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381956,567,468 - 56,582,894 (+)NCBI
GRCh371957,078,401 - 57,099,965 (+)NCBI
Build 361961,770,702 - 61,786,074 (+)NCBI Archive
Celera1954,121,878 - 54,137,251 (+)RGD
HuRef1953,388,817 - 53,404,276 (+)ENTREZGENE
CHM1_11957,072,471 - 57,087,859 (+)NCBI
T2T-CHM13v2.01959,661,869 - 59,677,296 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047438804   ⟹   XP_047294760
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381956,567,468 - 56,582,894 (+)NCBI
RefSeq Acc Id: XM_047438805   ⟹   XP_047294761
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381956,570,279 - 56,582,894 (+)NCBI
RefSeq Acc Id: XM_054320970   ⟹   XP_054176945
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01959,661,809 - 59,677,296 (+)NCBI
RefSeq Acc Id: XM_054320971   ⟹   XP_054176946
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01959,664,682 - 59,677,296 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001001668   ⟸   NM_001001668
- UniProtKB: Q6ZPA1 (UniProtKB/Swiss-Prot),   B9EGU1 (UniProtKB/Swiss-Prot),   A8MTW0 (UniProtKB/Swiss-Prot),   Q9Y2N9 (UniProtKB/Swiss-Prot),   Q6ECI4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000472891   ⟸   ENST00000594953
RefSeq Acc Id: ENSP00000471379   ⟸   ENST00000601902
RefSeq Acc Id: ENSP00000375590   ⟸   ENST00000391709
RefSeq Acc Id: ENSP00000333223   ⟸   ENST00000330619
RefSeq Acc Id: XP_047294760   ⟸   XM_047438804
- Peptide Label: isoform X1
- UniProtKB: Q6ZPA1 (UniProtKB/Swiss-Prot),   Q6ECI4 (UniProtKB/Swiss-Prot),   B9EGU1 (UniProtKB/Swiss-Prot),   A8MTW0 (UniProtKB/Swiss-Prot),   Q9Y2N9 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047294761   ⟸   XM_047438805
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054176945   ⟸   XM_054320970
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054176946   ⟸   XM_054320971
- Peptide Label: isoform X2
Protein Domains
KRAB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6ECI4-F1-model_v2 AlphaFold Q6ECI4 1-717 view protein structure

Promoters
RGD ID:13205843
Promoter ID:EPDNEW_H26503
Type:initiation region
Name:ZNF470_2
Description:zinc finger protein 470
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26504  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381956,567,030 - 56,567,090EPDNEW
RGD ID:13205849
Promoter ID:EPDNEW_H26504
Type:initiation region
Name:ZNF470_1
Description:zinc finger protein 470
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H26503  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381956,567,495 - 56,567,555EPDNEW
RGD ID:6796209
Promoter ID:HG_KWN:31128
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Lymphoblastoid
Transcripts:NM_001001668,   UC002QNK.1,   UC010ETN.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361961,770,231 - 61,770,797 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:22220 AgrOrtholog
COSMIC ZNF470 COSMIC
Ensembl Genes ENSG00000197016 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000330619 ENTREZGENE
  ENST00000330619.13 UniProtKB/Swiss-Prot
  ENST00000391709.4 UniProtKB/Swiss-Prot
  ENST00000594953.1 UniProtKB/TrEMBL
  ENST00000601902.5 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000197016 GTEx
HGNC ID HGNC:22220 ENTREZGENE
Human Proteome Map ZNF470 Human Proteome Map
InterPro KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:388566 UniProtKB/Swiss-Prot
NCBI Gene 388566 ENTREZGENE
OMIM 620441 OMIM
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRAB DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA145007252 PharmGKB
PROSITE KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF109640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57667 UniProtKB/Swiss-Prot
UniProt A8MTW0 ENTREZGENE
  B9EGU1 ENTREZGENE
  M0R0Q6_HUMAN UniProtKB/TrEMBL
  M0R2Y9_HUMAN UniProtKB/TrEMBL
  Q6ECI4 ENTREZGENE
  Q6ZPA1 ENTREZGENE
  Q9Y2N9 ENTREZGENE
  ZN470_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A8MTW0 UniProtKB/Swiss-Prot
  B9EGU1 UniProtKB/Swiss-Prot
  Q6ZPA1 UniProtKB/Swiss-Prot
  Q9Y2N9 UniProtKB/Swiss-Prot